Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:16:29 (16012): wrapper (7.7.26015): starting
17:16:29 (16012): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 17:16:29] Arguments: --nthreads 12
[2025-04-18 17:16:29] Threads: 12
[2025-04-18 17:16:29] Checking for CVMFS
[2025-04-18 17:16:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 17:16:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 17:16:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 17:16:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 17:16:30] 2.11.2.0 10995 193391 158288 145014 0 58 19217993 20275200 1 130560 0 23337882 99.990 7021740 48699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 17:16:30] CVMFS is ok
[2025-04-18 17:16:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 17:16:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 17:16:30] Further information can be found at the LHC@home message board.
[2025-04-18 17:16:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 17:16:30] Checking for apptainer binary...
[2025-04-18 17:16:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 17:16:30] Running /usr/bin/apptainer --version
[2025-04-18 17:16:30] apptainer version 1.3.2-1.el7
[2025-04-18 17:16:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 17:16:31] c-205-22.aglt2.org
[2025-04-18 17:16:31] apptainer works
[2025-04-18 17:16:31] Set ATHENA_PROC_NUMBER=12
[2025-04-18 17:16:31] Set ATHENA_CORE_NUMBER=12
[2025-04-18 17:16:31] Starting ATLAS job with PandaID=6606740692
[2025-04-18 17:16:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 18:40:40]  *** The last 200 lines of the pilot log: ***
[2025-04-18 18:40:40]  protocol_id=None
[2025-04-18 18:40:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 18:40:40]  replicas=None
[2025-04-18 18:40:40]  scope=mc23_13p6TeV
[2025-04-18 18:40:40]  status=None
[2025-04-18 18:40:40]  status_code=0
[2025-04-18 18:40:40]  storage_token=
[2025-04-18 18:40:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606740692/log.44075483._072539.job.log.tgz.1
[2025-04-18 18:40:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/41/log.44075483._072539.job.log.tgz.1
[2025-04-18 18:40:40]  workdir=None
[2025-04-18 18:40:40] ]
[2025-04-18 18:40:40] 2025-04-18 22:40:13,370 | INFO     | transferring file log.44075483._072539.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606740692/log.44075483._072539.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 18:40:40] 2025-04-18 22:40:13,370 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606740692/log.44075483._072539.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._072539.job
[2025-04-18 18:40:40] 2025-04-18 22:40:13,395 | INFO     | adding to output.list: log.44075483._072539.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/41/log.44075483._072539.job.log.tg
[2025-04-18 18:40:40] 2025-04-18 22:40:13,396 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 18:40:40] 2025-04-18 22:40:13,397 | INFO     | summary of transferred files:
[2025-04-18 18:40:40] 2025-04-18 22:40:13,397 | INFO     |  -- lfn=log.44075483._072539.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 18:40:40] 2025-04-18 22:40:13,397 | INFO     | stage-out finished correctly
[2025-04-18 18:40:40] 2025-04-18 22:40:13,984 | WARNING  | process 26046 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 18:40:40] 2025-04-18 22:40:13,985 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606740692/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 18:40:40] 2025-04-18 22:40:14,069 | INFO     | number of running child processes to parent process 26046: 1
[2025-04-18 18:40:40] 2025-04-18 22:40:14,069 | INFO     | maximum number of monitored processes: 6
[2025-04-18 18:40:40] 2025-04-18 22:40:15,942 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 18:40:40] 2025-04-18 22:40:16,573 | INFO     | monitor loop #374: job 0:6606740692 is in state 'finished'
[2025-04-18 18:40:40] 2025-04-18 22:40:16,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:40:40] 2025-04-18 22:40:17,017 | INFO     | PID=19613 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 18:40:40] 2025-04-18 22:40:17,027 | INFO     | job 6606740692 has state=finished
[2025-04-18 18:40:40] 2025-04-18 22:40:17,027 | INFO     | preparing for final server update for job 6606740692 in state='finished'
[2025-04-18 18:40:40] 2025-04-18 22:40:17,028 | INFO     | this job has now completed (state=finished)
[2025-04-18 18:40:40] 2025-04-18 22:40:17,028 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 18:40:40] 2025-04-18 22:40:17,028 | INFO     | log transfer has been attempted: DONE
[2025-04-18 18:40:40] 2025-04-18 22:40:17,028 | INFO     | job 6606740692 has finished - writing final server update
[2025-04-18 18:40:40] 2025-04-18 22:40:17,029 | INFO     | total number of processed events: 400 (read)
[2025-04-18 18:40:40] 2025-04-18 22:40:17,030 | INFO     | executing command: lscpu
[2025-04-18 18:40:40] 2025-04-18 22:40:17,056 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 18:40:40] 2025-04-18 22:40:19,076 | INFO     | monitor loop #375: job 0:6606740692 is in state 'finished'
[2025-04-18 18:40:40] 2025-04-18 22:40:19,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,579 | INFO     | monitor loop #376: job 0:6606740692 is in state 'finished'
[2025-04-18 18:40:40] 2025-04-18 22:40:21,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,687 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 18:40:40] 2025-04-18 22:40:21,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606740692/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,689 | INFO     | extracted standard info from prmon json
[2025-04-18 18:40:40] 2025-04-18 22:40:21,689 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 18:40:40] 2025-04-18 22:40:21,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 18:40:40] 2025-04-18 22:40:21,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 18:40:40] 2025-04-18 22:40:21,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 18:40:40] 2025-04-18 22:40:21,692 | INFO     | fitting pss+swap vs Time
[2025-04-18 18:40:40] 2025-04-18 22:40:21,693 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,693 | INFO     | sum of deviations: 18474314820.0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,693 | INFO     | mean x: 1745013597.0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,693 | INFO     | mean y: 2655002.3333333335
[2025-04-18 18:40:40] 2025-04-18 22:40:21,694 | INFO     | -- intersect: -246477612168.83435
[2025-04-18 18:40:40] 2025-04-18 22:40:21,694 | INFO     | intersect: -246477612168.83435
[2025-04-18 18:40:40] 2025-04-18 22:40:21,694 | INFO     | chi2: 2.383047699505576
[2025-04-18 18:40:40] 2025-04-18 22:40:21,694 | INFO     | -- intersect: -246477612168.83435
[2025-04-18 18:40:40] 2025-04-18 22:40:21,695 | INFO     | current memory leak: 141.25 B/s (using 75 data points, chi2=2.38)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,695 | INFO     | ..............................
[2025-04-18 18:40:40] 2025-04-18 22:40:21,695 | INFO     | . Timing measurements:
[2025-04-18 18:40:40] 2025-04-18 22:40:21,695 | INFO     | . get job = 0 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . initial setup = 4 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . payload setup = 7 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . stage-in = 0 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . payload execution = 4979 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . stage-out = 0 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | . log creation = 0 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,696 | INFO     | ..............................
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | 
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | job summary report
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | --------------------------------------------------
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | PanDA job id: 6606740692
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | task id: 44075483
[2025-04-18 18:40:40] 2025-04-18 22:40:21,781 | INFO     | errors: (none)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | pilot state: finished 
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | transexitcode: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | exeerrorcode: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | exeerrordiag: 
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | exitcode: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,782 | INFO     | exitmsg: OK
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | cpuconsumptiontime: 46382 s
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | nevents: 400
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | neventsw: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | pid: 26046
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | pgrp: 26046
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | corecount: 12
[2025-04-18 18:40:40] 2025-04-18 22:40:21,783 | INFO     | event service: False
[2025-04-18 18:40:40] 2025-04-18 22:40:21,784 | INFO     | sizes: {0: 2426652, 1: 2426851, 6: 2427057, 12: 2427085, 4990: 2453213, 4991: 2453212, 4992: 2462337, 4994: 2462393, 5000: 2462563}
[2025-04-18 18:40:40] 2025-04-18 22:40:21,784 | INFO     | --------------------------------------------------
[2025-04-18 18:40:40] 2025-04-18 22:40:21,784 | INFO     | 
[2025-04-18 18:40:40] 2025-04-18 22:40:21,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 18:40:40] 2025-04-18 22:40:21,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 18:40:40] 2025-04-18 22:40:21,810 | INFO     | job 6606740692 has completed (purged errors)
[2025-04-18 18:40:40] 2025-04-18 22:40:21,811 | INFO     | overall cleanup function is called
[2025-04-18 18:40:40] 2025-04-18 22:40:22,819 | INFO     | --- collectZombieJob: --- 10, [26046]
[2025-04-18 18:40:40] 2025-04-18 22:40:22,819 | INFO     | zombie collector waiting for pid 26046
[2025-04-18 18:40:40] 2025-04-18 22:40:22,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 18:40:40] 2025-04-18 22:40:22,820 | INFO     | collected zombie processes
[2025-04-18 18:40:40] 2025-04-18 22:40:22,820 | INFO     | will attempt to kill all subprocesses of pid=26046
[2025-04-18 18:40:40] 2025-04-18 22:40:22,913 | INFO     | process IDs to be killed: [26046] (in reverse order)
[2025-04-18 18:40:40] 2025-04-18 22:40:22,962 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 18:40:40] 2025-04-18 22:40:22,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 18:40:40] 2025-04-18 22:40:22,966 | INFO     | did not find any defunct processes belonging to 26046
[2025-04-18 18:40:40] 2025-04-18 22:40:22,969 | INFO     | did not find any defunct processes belonging to 26046
[2025-04-18 18:40:40] 2025-04-18 22:40:22,969 | INFO     | ready for new job
[2025-04-18 18:40:40] 2025-04-18 22:40:22,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 18:40:40] 2025-04-18 22:40:22,970 | INFO     | **************************************
[2025-04-18 18:40:40] 2025-04-18 22:40:22,970 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 18:40:40] 2025-04-18 22:40:22,971 | INFO     | **************************************
[2025-04-18 18:40:40] 2025-04-18 22:40:22,971 | INFO     | 
[2025-04-18 18:40:40] 2025-04-18 22:40:22,971 | INFO     | architecture information:
[2025-04-18 18:40:40] 2025-04-18 22:40:22,972 | INFO     | executing command: cat /etc/os-release
[2025-04-18 18:40:40] 2025-04-18 22:40:22,986 | INFO     | cat /etc/os-release:
[2025-04-18 18:40:40] NAME="CentOS Linux"
[2025-04-18 18:40:40] VERSION="7 (Core)"
[2025-04-18 18:40:40] ID="centos"
[2025-04-18 18:40:40] ID_LIKE="rhel fedora"
[2025-04-18 18:40:40] VERSION_ID="7"
[2025-04-18 18:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 18:40:40] ANSI_COLOR="0;31"
[2025-04-18 18:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 18:40:40] HOME_URL="https://www.centos.org/"
[2025-04-18 18:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 18:40:40] 
[2025-04-18 18:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 18:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 18:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 18:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 18:40:40] 
[2025-04-18 18:40:40] 2025-04-18 22:40:22,987 | INFO     | **************************************
[2025-04-18 18:40:40] 2025-04-18 22:40:23,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 18:40:40] 2025-04-18 22:40:23,525 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-18 18:40:40] 2025-04-18 22:40:23,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 18:40:40] 2025-04-18 22:40:23,525 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 18:40:40] 2025-04-18 22:40:23,526 | INFO     | update_server=False
[2025-04-18 18:40:40] 2025-04-18 22:40:23,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 18:40:40] 2025-04-18 22:40:23,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:40:40] 2025-04-18 22:40:23,526 | INFO     | aborting loop
[2025-04-18 18:40:40] 2025-04-18 22:40:23,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:40:40] 2025-04-18 22:40:23,527 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 18:40:40] 2025-04-18 22:40:23,527 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 18:40:40] 2025-04-18 22:40:23,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 18:40:40] 2025-04-18 22:40:23,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 18:40:40] 2025-04-18 22:40:23,895 | INFO     | all job control threads have been joined
[2025-04-18 18:40:40] 2025-04-18 22:40:23,969 | INFO     | all data control threads have been joined
[2025-04-18 18:40:40] 2025-04-18 22:40:24,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 18:40:40] 2025-04-18 22:40:24,529 | INFO     | [job] retrieve thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,529 | INFO     | [job] job monitor thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,532 | INFO     | [job] queue monitor thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,563 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,829 | INFO     | [data] copytool_in thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,838 | INFO     | [payload] validate_post thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,901 | INFO     | [job] control thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:24,958 | INFO     | all payload control threads have been joined
[2025-04-18 18:40:40] 2025-04-18 22:40:24,974 | INFO     | [data] control thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:25,291 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:25,725 | INFO     | [job] validate thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:25,729 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:25,846 | INFO     | [payload] failed_post thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:25,962 | INFO     | [payload] control thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:26,002 | INFO     | [data] copytool_out thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:26,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 18:40:40] 2025-04-18 22:40:30,540 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:33,803 | INFO     | job.realtimelogging is not enabled
[2025-04-18 18:40:40] 2025-04-18 22:40:34,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 18:40:40] 2025-04-18 22:40:35,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296773211968)>', '<ExcThread(monitor, started 140296096569088)>']
[2025-04-18 18:40:40] 2025-04-18 22:40:35,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 18:40:40] 2025-04-18 22:40:35,587 | INFO     | [monitor] control thread has ended
[2025-04-18 18:40:40] 2025-04-18 22:40:40,514 | INFO     | all workflow threads have been joined
[2025-04-18 18:40:40] 2025-04-18 22:40:40,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 18:40:40] 2025-04-18 22:40:40,514 | INFO     | traces error code: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:40,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 18:40:40] 2025-04-18 22:40:40,606 [wrapper] ==== pilot stdout END ====
[2025-04-18 18:40:40] 2025-04-18 22:40:40,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 18:40:40] 2025-04-18 22:40:40,614 [wrapper] pilotpid: 19613
[2025-04-18 18:40:40] 2025-04-18 22:40:40,617 [wrapper] Pilot exit status: 0
[2025-04-18 18:40:40] 2025-04-18 22:40:40,630 [wrapper] pandaids: 6606740692
[2025-04-18 18:40:40] 2025-04-18 22:40:40,664 [wrapper] cleanup supervisor_pilot  5312 19615
[2025-04-18 18:40:40] 2025-04-18 22:40:40,668 [wrapper] Test setup, not cleaning
[2025-04-18 18:40:40] 2025-04-18 22:40:40,672 [wrapper] apfmon messages muted
[2025-04-18 18:40:40] 2025-04-18 22:40:40,675 [wrapper] ==== wrapper stdout END ====
[2025-04-18 18:40:40] 2025-04-18 22:40:40,679 [wrapper] ==== wrapper stderr END ====
[2025-04-18 18:40:40]  *** Error codes and diagnostics ***
[2025-04-18 18:40:40]     "exeErrorCode": 0,
[2025-04-18 18:40:40]     "exeErrorDiag": "",
[2025-04-18 18:40:40]     "pilotErrorCode": 0,
[2025-04-18 18:40:40]     "pilotErrorDiag": "",
[2025-04-18 18:40:40]  *** Listing of results directory ***
[2025-04-18 18:40:40] total 413984
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 14:01 pilot3.tar.gz
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 14:08 queuedata.json
[2025-04-18 18:40:40] -rwx------ 1 boincer umatlas     37140 Apr 18 14:09 runpilot2-wrapper.sh
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas       100 Apr 18 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 18:40:40] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 17:16 run_atlas
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas       105 Apr 18 17:16 job.xml
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas 225585241 Apr 18 17:16 EVNT.44075481._002817.pool.root.1
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 17:16 start_atlas.sh
[2025-04-18 18:40:40] drwxrwx--x 2 boincer umatlas      4096 Apr 18 17:16 shared
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas    508896 Apr 18 17:16 input.tar.gz
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas         0 Apr 18 17:16 boinc_lockfile
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 17:16 pandaJob.out
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas       424 Apr 18 17:16 setup.sh.local
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas    991292 Apr 18 17:16 agis_schedconf.cvmfs.json
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas   1618536 Apr 18 17:16 agis_ddmendpoints.agis.ALL.json
[2025-04-18 18:40:40] drwx------ 4 boincer umatlas      4096 Apr 18 17:16 pilot3
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 18:37 init_data.xml
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas 192785132 Apr 18 18:39 HITS.44075483._072539.pool.root.1
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas        95 Apr 18 18:39 pilot_heartbeat.json
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas       529 Apr 18 18:39 boinc_task_state.xml
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas      1051 Apr 18 18:40 memory_monitor_summary.json
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas    366214 Apr 18 18:40 log.44075483._072539.job.log.tgz.1
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 18:40 boinc_mmap_file
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas      7753 Apr 18 18:40 heartbeat.json
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas        27 Apr 18 18:40 wrapper_checkpoint.txt
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas      4548 Apr 18 18:40 pilotlog.txt
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas    477197 Apr 18 18:40 log.44075483._072539.job.log.1
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas       357 Apr 18 18:40 output.list
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas       620 Apr 18 18:40 runtime_log
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas    860160 Apr 18 18:40 result.tar.gz
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 18:40 runtime_log.err
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas       658 Apr 18 18:40 a5mMDmzK5P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmvR5KDmIphsgn.diag
[2025-04-18 18:40:40] -rw-r--r-- 1 boincer umatlas     21856 Apr 18 18:40 stderr.txt
[2025-04-18 18:40:40] HITS file was successfully produced:
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas 192785132 Apr 18 18:39 shared/HITS.pool.root.1
[2025-04-18 18:40:40]  *** Contents of shared directory: ***
[2025-04-18 18:40:40] total 409932
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas 225585241 Apr 18 17:16 ATLAS.root_0
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 17:16 start_atlas.sh
[2025-04-18 18:40:40] -rw-r--r-- 2 boincer umatlas    508896 Apr 18 17:16 input.tar.gz
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas 192785132 Apr 18 18:39 HITS.pool.root.1
[2025-04-18 18:40:40] -rw------- 1 boincer umatlas    860160 Apr 18 18:40 result.tar.gz
18:40:41 (16012): run_atlas exited; CPU time 46365.340156
18:40:41 (16012): called boinc_finish(0)

</stderr_txt>
]]>

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