Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 23:21:52 (20856): Detected: vboxwrapper 26206
2025-04-18 23:21:52 (20856): Detected: BOINC client v8.0.2
2025-04-18 23:21:53 (20856): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-04-18 23:21:53 (20856): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 23:21:54 (20856): Create VM. (boinc_f6a7d7f32a81a85a, slot#14)
2025-04-18 23:21:55 (20856): Setting Memory Size for VM. (4300MB)
2025-04-18 23:21:56 (20856): Setting CPU Count for VM. (3)
2025-04-18 23:21:56 (20856): Setting Chipset Options for VM.
2025-04-18 23:21:57 (20856): Setting Graphics Controller Options for VM.
2025-04-18 23:21:57 (20856): Setting Boot Options for VM.
2025-04-18 23:21:58 (20856): Setting Network Configuration for NAT.
2025-04-18 23:21:58 (20856): Enabling VM Network Access.
2025-04-18 23:21:58 (20856): Disabling USB Support for VM.
2025-04-18 23:21:59 (20856): Disabling COM Port Support for VM.
2025-04-18 23:21:59 (20856): Disabling LPT Port Support for VM.
2025-04-18 23:22:00 (20856): Disabling Audio Support for VM.
2025-04-18 23:22:00 (20856): Disabling Clipboard Support for VM.
2025-04-18 23:22:01 (20856): Disabling Drag and Drop Support for VM.
2025-04-18 23:22:01 (20856): Adding storage controller(s) to VM.
2025-04-18 23:22:01 (20856): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 23:22:04 (20856): Adding VirtualBox Guest Additions to VM.
2025-04-18 23:22:05 (20856): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 23:22:05 (20856): forwarding host port 63216 to guest port 80
2025-04-18 23:22:05 (20856): Enabling remote desktop for VM.
2025-04-18 23:22:05 (20856): Required extension pack not installed, remote desktop not enabled.
2025-04-18 23:22:05 (20856): Enabling shared directory for VM.
2025-04-18 23:22:06 (20856): Starting VM using VBoxManage interface. (boinc_f6a7d7f32a81a85a, slot#14)
2025-04-18 23:22:10 (20856): Successfully started VM. (PID = '14128')
2025-04-18 23:22:10 (20856): Reporting VM Process ID to BOINC.
2025-04-18 23:22:10 (20856): Guest Log: BIOS: VirtualBox 7.0.10
2025-04-18 23:22:10 (20856): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 23:22:10 (20856): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 23:22:10 (20856): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 23:22:10 (20856): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 23:22:10 (20856): Detected: Web Application Enabled (http://localhost:63216)
2025-04-18 23:22:11 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:22:22 (20856): Preference change detected
2025-04-18 23:22:22 (20856): Setting CPU throttle for VM. (100%)
2025-04-18 23:22:22 (20856): Setting network throttle for VM. (2000KB)
2025-04-18 23:22:23 (20856): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 23:22:23 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:22:24 (20856): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 23:22:24 (20856): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 23:22:26 (20856): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 23:22:26 (20856): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 23:22:26 (20856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 23:22:32 (20856): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 23:22:32 (20856): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 23:22:35 (20856): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000079 main     Log opened 2025-04-18T23:22:21.614582000Z
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000148 main     OS Product: Linux
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000164 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000177 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000190 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000191 main     Process ID: 1281
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000191 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 23:22:35 (20856): Guest Log: 00:00:00.000545 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 23:22:35 (20856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 23:22:35 (20856): Guest Log: [INFO] Mounting shared directory
2025-04-18 23:22:35 (20856): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 23:22:37 (20856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 23:22:37 (20856): Guest Log: [INFO] Detected branch: prod
2025-04-18 23:22:37 (20856): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 23:22:37 (20856): Guest Log: Copying input files
2025-04-18 23:22:38 (20856): Guest Log: Copied input files into RunAtlas.
2025-04-18 23:22:38 (20856): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 23:22:38 (20856): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 23:22:38 (20856): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 23:22:38 (20856): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 23:22:44 (20856): Guest Log: 00:00:10.003213 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 176 976 035 000ns (GuestNow=1 745 011 364 639 824 000 ns GuestLast=1 745 018 541 615 859 000 ns fSetTimeLastLoop=true )
2025-04-18 23:22:58 (20856): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 23:22:58 (20856): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 23:22:58 (20856): Guest Log: 2.6.3.0 1553 0 32208 145016 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 23:22:59 (20856): Guest Log: copied the webapp to /var/www
2025-04-18 23:22:59 (20856): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-18 23:22:59 (20856): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-18 23:22:59 (20856): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 23:22:59 (20856): Guest Log:  *** Starting ATLAS job. (PandaID=6605003949 taskID=44075483) ***
2025-04-18 23:24:12 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:24:32 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:27:13 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:27:33 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:41:04 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:41:25 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:47:04 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:47:24 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:54:25 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:54:45 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:55:05 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:55:26 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 23:56:27 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 23:56:47 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 00:00:17 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 00:00:37 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 00:05:37 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 00:05:58 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 00:21:58 (20856): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 00:22:18 (20856): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 00:41:20 (20856): Guest Log:  *** Job finished ***
2025-04-19 00:41:20 (20856): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:45,012 | INFO     | [data] queue_monitor thread has finished
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:51,868 | INFO     | job.realtimelogging is not enabled
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:52,870 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:55,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960928118592)>', '<ExcThread(monitor, started 139959956662016)>']
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:56,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:37:56,077 | INFO     | [monitor] control thread has ended
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,160 | INFO     | all workflow threads have been joined
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,160 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,161 | INFO     | traces error code: 0
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,197 [wrapper] ==== pilot stdout END ====
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,199 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,202 [wrapper] pilotpid: 5869
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,204 [wrapper] Pilot exit status: 0
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,280 [wrapper] pandaids: 6605003949
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,293 [wrapper] cleanup supervisor_pilot 21455 5870
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,295 [wrapper] Test setup, not cleaning
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,298 [wrapper] apfmon messages muted
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,300 [wrapper] ==== wrapper stdout END ====
2025-04-19 00:41:20 (20856): Guest Log: 2025-04-18 22:38:00,303 [wrapper] ==== wrapper stderr END ====
2025-04-19 00:41:20 (20856): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 00:41:20 (20856): Guest Log:     "exeErrorCode": 0,
2025-04-19 00:41:20 (20856): Guest Log:     "exeErrorDiag": "",
2025-04-19 00:41:20 (20856): Guest Log:     "pilotErrorCode": 0,
2025-04-19 00:41:20 (20856): Guest Log:     "pilotErrorDiag": "",
2025-04-19 00:41:20 (20856): Guest Log:  *** Listing of results directory ***
2025-04-19 00:41:20 (20856): Guest Log: total 191868
2025-04-19 00:41:20 (20856): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 06:03 pilot3.tar.gz
2025-04-19 00:41:20 (20856): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 06:22 runpilot2-wrapper.sh
2025-04-19 00:41:20 (20856): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 06:22 queuedata.json
2025-04-19 00:41:20 (20856): Guest Log: -rwxr-xr-x. 1 atlas atlas      9329 Apr 18 21:22 init_data.xml
2025-04-19 00:41:20 (20856): Guest Log: -rwxr-xr-x. 1 atlas atlas    508889 Apr 18 21:22 input.tar.gz
2025-04-19 00:41:20 (20856): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 21:22 start_atlas.sh
2025-04-19 00:41:21 (20856): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 21:22 EVNT.44075481._002014.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 00:41:21 (20856): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 18 21:22 pandaJob.out
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 21:23 setup.sh.local
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas    991300 Apr 18 21:23 agis_schedconf.cvmfs.json
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 21:23 agis_ddmendpoints.agis.ALL.json
2025-04-19 00:41:21 (20856): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 21:23 pilot3
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 22:36 pilot_heartbeat.json
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas 191394725 Apr 18 22:37 HITS.44075483._051610.pool.root.1
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 18 22:37 memory_monitor_summary.json
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas    222591 Apr 18 22:37 log.44075483._051610.job.log.tgz.1
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas      7708 Apr 18 22:37 heartbeat.json
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 18 22:38 pilotlog.txt
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas    418756 Apr 18 22:38 log.44075483._051610.job.log.1
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 22:38 output.list
2025-04-19 00:41:21 (20856): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 22:38 runtime_log
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas    655360 Apr 18 22:38 result.tar.gz
2025-04-19 00:41:21 (20856): Guest Log: -rw-r--r--. 1 atlas atlas     10932 Apr 18 22:38 runtime_log.err
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas       649 Apr 18 22:38 0TLKDmNpXP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmmb3KDmsjucnm.diag
2025-04-19 00:41:21 (20856): Guest Log: Looking for outputfile HITS.44075483._051610.pool.root.1
2025-04-19 00:41:21 (20856): Guest Log: HITS file was successfully produced
2025-04-19 00:41:21 (20856): Guest Log: -rw-------. 1 atlas atlas 191394725 Apr 18 22:37 /home/atlas/RunAtlas/HITS.44075483._051610.pool.root.1
2025-04-19 00:41:22 (20856): Guest Log: Successfully finished the ATLAS job!
2025-04-19 00:41:22 (20856): Guest Log: Copying the results back to the shared directory!
2025-04-19 00:41:22 (20856): Guest Log:  *** Contents of shared directory: ***
2025-04-19 00:41:22 (20856): Guest Log: total 406312
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root 223462174 Apr 18 21:21 ATLAS.root_0
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root 191394725 Apr 18  2025 HITS.pool.root.1
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root      9329 Apr 18 21:21 init_data.xml
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root    508889 Apr 18 21:20 input.tar.gz
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root    655360 Apr 18  2025 result.tar.gz
2025-04-19 00:41:22 (20856): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 21:20 start_atlas.sh
2025-04-19 00:41:22 (20856): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 00:41:22 (20856): VM Completion File Detected.
2025-04-19 00:41:22 (20856): Powering off VM.
2025-04-19 00:41:22 (20856): Successfully stopped VM.
2025-04-19 00:41:22 (20856): Deregistering VM. (boinc_f6a7d7f32a81a85a, slot#14)
2025-04-19 00:41:23 (20856): Removing network bandwidth throttle group from VM.
2025-04-19 00:41:23 (20856): Removing VM from VirtualBox.
00:41:29 (20856): called boinc_finish(0)

</stderr_txt>
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