Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:07:41 (1364593): wrapper (7.7.26015): starting
08:07:41 (1364593): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 08:07:41] Arguments: --nthreads 3
[2025-04-19 08:07:41] Threads: 3
[2025-04-19 08:07:41] Checking for CVMFS
[2025-04-19 08:07:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:07:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:07:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:07:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:07:42] 2.9.2.0 3073 5528 78020 145027 0 56 32907109 36864001 0 130560 0 3516917 99.988 1365599 8588 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 08:07:42] CVMFS is ok
[2025-04-19 08:07:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:07:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 08:07:42] Further information can be found at the LHC@home message board.
[2025-04-19 08:07:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:07:42] Checking for apptainer binary...
[2025-04-19 08:07:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 08:07:42] Running /usr/bin/apptainer --version
[2025-04-19 08:07:42] apptainer version 1.3.6-6.1
[2025-04-19 08:07:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:07:42] atlasA228
[2025-04-19 08:07:42] apptainer works
[2025-04-19 08:07:42] Set ATHENA_PROC_NUMBER=3
[2025-04-19 08:07:42] Set ATHENA_CORE_NUMBER=3
[2025-04-19 08:07:42] Starting ATLAS job with PandaID=6606740603
[2025-04-19 08:07:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:44:43]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:44:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:44:43]  replicas=None
[2025-04-19 09:44:43]  scope=mc23_13p6TeV
[2025-04-19 09:44:43]  status=None
[2025-04-19 09:44:43]  status_code=0
[2025-04-19 09:44:43]  storage_token=
[2025-04-19 09:44:43]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606740603/log.44075483._072450.job.log.tgz.1
[2025-04-19 09:44:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/2f/log.44075483._072450.job.log.tgz.1
[2025-04-19 09:44:43]  workdir=None
[2025-04-19 09:44:43] ]
[2025-04-19 09:44:43] 2025-04-19 07:44:14,572 | INFO     | transferring file log.44075483._072450.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606740603/log.44075483._072450.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 09:44:43] 2025-04-19 07:44:14,572 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606740603/log.44075483._072450.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0724
[2025-04-19 09:44:43] 2025-04-19 07:44:14,584 | INFO     | adding to output.list: log.44075483._072450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/2f/log.44075483._072450.job.log.tg
[2025-04-19 09:44:43] 2025-04-19 07:44:14,585 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:44:43] 2025-04-19 07:44:14,585 | INFO     | summary of transferred files:
[2025-04-19 09:44:43] 2025-04-19 07:44:14,585 | INFO     |  -- lfn=log.44075483._072450.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:44:43] 2025-04-19 07:44:14,585 | INFO     | stage-out finished correctly
[2025-04-19 09:44:43] 2025-04-19 07:44:15,786 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:44:43] 2025-04-19 07:44:17,434 | WARNING  | process 1374696 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 09:44:43] 2025-04-19 07:44:17,434 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606740603/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:44:43] 2025-04-19 07:44:17,469 | INFO     | number of running child processes to parent process 1374696: 1
[2025-04-19 09:44:43] 2025-04-19 07:44:17,469 | INFO     | maximum number of monitored processes: 6
[2025-04-19 09:44:43] 2025-04-19 07:44:18,116 | INFO     | job 6606740603 has state=finished
[2025-04-19 09:44:43] 2025-04-19 07:44:18,116 | INFO     | preparing for final server update for job 6606740603 in state='finished'
[2025-04-19 09:44:43] 2025-04-19 07:44:18,117 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:44:43] 2025-04-19 07:44:18,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:44:43] 2025-04-19 07:44:18,117 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:44:43] 2025-04-19 07:44:18,118 | INFO     | job 6606740603 has finished - writing final server update
[2025-04-19 09:44:43] 2025-04-19 07:44:18,118 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:44:43] 2025-04-19 07:44:18,121 | INFO     | executing command: lscpu
[2025-04-19 09:44:43] 2025-04-19 07:44:18,138 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:44:43] 2025-04-19 07:44:19,972 | INFO     | monitor loop #445: job 0:6606740603 is in state 'finished'
[2025-04-19 09:44:43] 2025-04-19 07:44:19,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:44:43] 2025-04-19 07:44:20,907 | INFO     | 5790s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 09:44:43] 2025-04-19 07:44:22,475 | INFO     | monitor loop #446: job 0:6606740603 is in state 'finished'
[2025-04-19 09:44:43] 2025-04-19 07:44:22,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,117 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 09:44:43] 2025-04-19 07:44:23,117 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606740603/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,118 | INFO     | extracted standard info from prmon json
[2025-04-19 09:44:43] 2025-04-19 07:44:23,118 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:44:43] 2025-04-19 07:44:23,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:44:43] 2025-04-19 07:44:23,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:44:43] 2025-04-19 07:44:23,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | sum of square deviations: 211285822.0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | sum of deviations: 12715470618.0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | mean x: 1745045854.5
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | mean y: 2384114.727272727
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | -- intersect: -105016869330.29305
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | intersect: -105016869330.29305
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | chi2: 1.4680205355970926
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | -- intersect: -105016869330.29305
[2025-04-19 09:44:43] 2025-04-19 07:44:23,119 | INFO     | current memory leak: 60.18 B/s (using 88 data points, chi2=1.47)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | ..............................
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . Timing measurements:
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . get job = 0 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . initial setup = 1 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . payload setup = 5 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . stage-in = 0 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . payload execution = 5756 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . stage-out = 0 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | . log creation = 0 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,120 | INFO     | ..............................
[2025-04-19 09:44:43] 2025-04-19 07:44:23,233 | INFO     | 
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | job summary report
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | --------------------------------------------------
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | PanDA job id: 6606740603
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | task id: 44075483
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | errors: (none)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | pilot state: finished 
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | transexitcode: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | exeerrorcode: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | exeerrordiag: 
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | exitcode: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | exitmsg: OK
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | cpuconsumptiontime: 15317 s
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | nevents: 400
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | neventsw: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | pid: 1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | pgrp: 1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | corecount: 3
[2025-04-19 09:44:43] 2025-04-19 07:44:23,234 | INFO     | event service: False
[2025-04-19 09:44:43] 2025-04-19 07:44:23,235 | INFO     | sizes: {0: 2426776, 4: 2426982, 10: 2427010, 5767: 2453652, 5768: 2462599, 5769: 2462655, 5776: 2462953}
[2025-04-19 09:44:43] 2025-04-19 07:44:23,235 | INFO     | --------------------------------------------------
[2025-04-19 09:44:43] 2025-04-19 07:44:23,235 | INFO     | 
[2025-04-19 09:44:43] 2025-04-19 07:44:23,235 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 09:44:43] 2025-04-19 07:44:23,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:44:43] 2025-04-19 07:44:23,257 | INFO     | job 6606740603 has completed (purged errors)
[2025-04-19 09:44:43] 2025-04-19 07:44:23,257 | INFO     | overall cleanup function is called
[2025-04-19 09:44:43] 2025-04-19 07:44:23,967 | INFO     | PID=1368258 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 09:44:43] 2025-04-19 07:44:24,265 | INFO     | --- collectZombieJob: --- 10, [1374696]
[2025-04-19 09:44:43] 2025-04-19 07:44:24,265 | INFO     | zombie collector waiting for pid 1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:24,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:44:43] 2025-04-19 07:44:24,265 | INFO     | collected zombie processes
[2025-04-19 09:44:43] 2025-04-19 07:44:24,265 | INFO     | will attempt to kill all subprocesses of pid=1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:24,305 | INFO     | process IDs to be killed: [1374696] (in reverse order)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,332 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:44:43] 2025-04-19 07:44:24,333 | INFO     | did not find any defunct processes belonging to 1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:24,334 | INFO     | did not find any defunct processes belonging to 1374696
[2025-04-19 09:44:43] 2025-04-19 07:44:24,334 | INFO     | ready for new job
[2025-04-19 09:44:43] 2025-04-19 07:44:24,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | **************************************
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | **************************************
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | 
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | architecture information:
[2025-04-19 09:44:43] 2025-04-19 07:44:24,335 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:44:43] 2025-04-19 07:44:24,346 | INFO     | cat /etc/os-release:
[2025-04-19 09:44:43] NAME="CentOS Linux"
[2025-04-19 09:44:43] VERSION="7 (Core)"
[2025-04-19 09:44:43] ID="centos"
[2025-04-19 09:44:43] ID_LIKE="rhel fedora"
[2025-04-19 09:44:43] VERSION_ID="7"
[2025-04-19 09:44:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:44:43] ANSI_COLOR="0;31"
[2025-04-19 09:44:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:44:43] HOME_URL="https://www.centos.org/"
[2025-04-19 09:44:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:44:43] 
[2025-04-19 09:44:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:44:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:44:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:44:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:44:43] 
[2025-04-19 09:44:43] 2025-04-19 07:44:24,346 | INFO     | **************************************
[2025-04-19 09:44:43] 2025-04-19 07:44:24,850 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 09:44:43] 2025-04-19 07:44:24,862 | INFO     | sufficient remaining disk space (322475917312 B)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | INFO     | update_server=False
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:44:43] 2025-04-19 07:44:24,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:44:43] 2025-04-19 07:44:24,947 | INFO     | all data control threads have been joined
[2025-04-19 09:44:43] 2025-04-19 07:44:24,980 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 09:44:43] 2025-04-19 07:44:24,980 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 09:44:43] 2025-04-19 07:44:24,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:44:43] 2025-04-19 07:44:24,981 | INFO     | will abort loop
[2025-04-19 09:44:43] 2025-04-19 07:44:25,088 | INFO     | all payload control threads have been joined
[2025-04-19 09:44:43] 2025-04-19 07:44:25,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:44:43] 2025-04-19 07:44:25,350 | INFO     | all job control threads have been joined
[2025-04-19 09:44:43] 2025-04-19 07:44:25,869 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:25,869 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:25,923 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:25,953 | INFO     | [data] control thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:25,986 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:26,074 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:26,094 | INFO     | [payload] control thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:26,280 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:26,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:44:43] 2025-04-19 07:44:26,356 | INFO     | [job] control thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:26,539 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:27,117 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:27,128 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:27,138 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:27,163 | INFO     | [job] validate thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:30,337 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:35,669 | INFO     | job.realtimelogging is not enabled
[2025-04-19 09:44:43] 2025-04-19 07:44:36,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:44:43] 2025-04-19 07:44:38,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463464511296)>', '<ExcThread(monitor, started 140463105353472)>']
[2025-04-19 09:44:43] 2025-04-19 07:44:38,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:44:43] 2025-04-19 07:44:38,939 | INFO     | [monitor] control thread has ended
[2025-04-19 09:44:43] 2025-04-19 07:44:43,152 | INFO     | all workflow threads have been joined
[2025-04-19 09:44:43] 2025-04-19 07:44:43,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:44:43] 2025-04-19 07:44:43,153 | INFO     | traces error code: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:43,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:44:43] 2025-04-19 07:44:43,199 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:44:43] 2025-04-19 07:44:43,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:44:43] 2025-04-19 07:44:43,206 [wrapper] pilotpid: 1368258
[2025-04-19 09:44:43] 2025-04-19 07:44:43,208 [wrapper] Pilot exit status: 0
[2025-04-19 09:44:43] 2025-04-19 07:44:43,216 [wrapper] pandaids: 6606740603
[2025-04-19 09:44:43] 2025-04-19 07:44:43,233 [wrapper] cleanup supervisor_pilot 1386876 1368259
[2025-04-19 09:44:43] 2025-04-19 07:44:43,237 [wrapper] Test setup, not cleaning
[2025-04-19 09:44:43] 2025-04-19 07:44:43,240 [wrapper] apfmon messages muted
[2025-04-19 09:44:43] 2025-04-19 07:44:43,243 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:44:43] 2025-04-19 07:44:43,246 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:44:43]  *** Error codes and diagnostics ***
[2025-04-19 09:44:43]     "exeErrorCode": 0,
[2025-04-19 09:44:43]     "exeErrorDiag": "",
[2025-04-19 09:44:43]     "pilotErrorCode": 0,
[2025-04-19 09:44:43]     "pilotErrorDiag": "",
[2025-04-19 09:44:43]  *** Listing of results directory ***
[2025-04-19 09:44:43] total 409932
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc    495897 Apr 18 19:37 pilot3.tar.gz
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc      5111 Apr 18 20:00 queuedata.json
[2025-04-19 09:44:43] -rwx------ 1 boinc boinc     37140 Apr 18 20:00 runpilot2-wrapper.sh
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc       100 Apr 19 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:44:43] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 08:07 run_atlas
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc       105 Apr 19 08:07 job.xml
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc 222193722 Apr 19 08:07 EVNT.44075481._002813.pool.root.1
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc      6682 Apr 19 08:07 init_data.xml
[2025-04-19 09:44:43] drwxrwx--x 2 boinc boinc      4096 Apr 19 08:07 shared
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc    508894 Apr 19 08:07 input.tar.gz
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:07 start_atlas.sh
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc         0 Apr 19 08:07 boinc_lockfile
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc      2578 Apr 19 08:07 pandaJob.out
[2025-04-19 09:44:43] -rw------- 1 boinc boinc       424 Apr 19 08:07 setup.sh.local
[2025-04-19 09:44:43] -rw------- 1 boinc boinc    991292 Apr 19 08:07 agis_schedconf.cvmfs.json
[2025-04-19 09:44:43] -rw------- 1 boinc boinc   1618536 Apr 19 08:07 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:44:43] drwx------ 4 boinc boinc      4096 Apr 19 08:07 pilot3
[2025-04-19 09:44:43] -rw------- 1 boinc boinc 192088446 Apr 19 09:43 HITS.44075483._072450.pool.root.1
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc       529 Apr 19 09:43 boinc_task_state.xml
[2025-04-19 09:44:43] -rw------- 1 boinc boinc      1032 Apr 19 09:44 memory_monitor_summary.json
[2025-04-19 09:44:43] -rw------- 1 boinc boinc    250606 Apr 19 09:44 log.44075483._072450.job.log.tgz.1
[2025-04-19 09:44:43] -rw------- 1 boinc boinc        95 Apr 19 09:44 pilot_heartbeat.json
[2025-04-19 09:44:43] -rw------- 1 boinc boinc      7664 Apr 19 09:44 heartbeat.json
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc      8192 Apr 19 09:44 boinc_mmap_file
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc        27 Apr 19 09:44 wrapper_checkpoint.txt
[2025-04-19 09:44:43] -rw------- 1 boinc boinc      4738 Apr 19 09:44 pilotlog.txt
[2025-04-19 09:44:43] -rw------- 1 boinc boinc    556369 Apr 19 09:44 log.44075483._072450.job.log.1
[2025-04-19 09:44:43] -rw------- 1 boinc boinc       357 Apr 19 09:44 output.list
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc       620 Apr 19 09:44 runtime_log
[2025-04-19 09:44:43] -rw------- 1 boinc boinc    829440 Apr 19 09:44 result.tar.gz
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc     11114 Apr 19 09:44 runtime_log.err
[2025-04-19 09:44:43] -rw------- 1 boinc boinc       661 Apr 19 09:44 Sb4NDm6B5P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCR5KDm7eCAgn.diag
[2025-04-19 09:44:43] -rw-r--r-- 1 boinc boinc     21915 Apr 19 09:44 stderr.txt
[2025-04-19 09:44:43] HITS file was successfully produced:
[2025-04-19 09:44:43] -rw------- 1 boinc boinc 192088446 Apr 19 09:43 shared/HITS.pool.root.1
[2025-04-19 09:44:43]  *** Contents of shared directory: ***
[2025-04-19 09:44:43] total 405916
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc 222193722 Apr 19 08:07 ATLAS.root_0
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc    508894 Apr 19 08:07 input.tar.gz
[2025-04-19 09:44:43] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:07 start_atlas.sh
[2025-04-19 09:44:43] -rw------- 1 boinc boinc 192088446 Apr 19 09:43 HITS.pool.root.1
[2025-04-19 09:44:43] -rw------- 1 boinc boinc    829440 Apr 19 09:44 result.tar.gz
09:44:44 (1364593): run_atlas exited; CPU time 15346.197488
09:44:44 (1364593): called boinc_finish(0)

</stderr_txt>
]]>

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