Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:21:37 (28862): wrapper (7.7.26015): starting
16:21:37 (28862): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 16:21:37] Arguments: --nthreads 12
[2025-04-18 16:21:37] Threads: 12
[2025-04-18 16:21:37] Checking for CVMFS
[2025-04-18 16:21:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 16:21:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 16:21:37] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 16:21:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 16:21:37] 2.11.2.0 3124 82156 154120 145014 3 56 19069799 20275201 1 130560 0 23920450 99.971 7602414 47628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 16:21:37] CVMFS is ok
[2025-04-18 16:21:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 16:21:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 16:21:37] Further information can be found at the LHC@home message board.
[2025-04-18 16:21:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 16:21:37] Checking for apptainer binary...
[2025-04-18 16:21:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 16:21:37] Running /usr/bin/apptainer --version
[2025-04-18 16:21:37] apptainer version 1.3.2-1.el7
[2025-04-18 16:21:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 16:21:38] c-205-29.aglt2.org
[2025-04-18 16:21:38] apptainer works
[2025-04-18 16:21:38] Set ATHENA_PROC_NUMBER=12
[2025-04-18 16:21:38] Set ATHENA_CORE_NUMBER=12
[2025-04-18 16:21:38] Starting ATLAS job with PandaID=6606293789
[2025-04-18 16:21:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 17:44:55]  *** The last 200 lines of the pilot log: ***
[2025-04-18 17:44:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 17:44:55]  is_altstaged=None
[2025-04-18 17:44:55]  is_tar=False
[2025-04-18 17:44:55]  lfn=log.44075483._067115.job.log.tgz.1
[2025-04-18 17:44:55]  mtime=0
[2025-04-18 17:44:55]  protocol_id=None
[2025-04-18 17:44:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 17:44:55]  replicas=None
[2025-04-18 17:44:55]  scope=mc23_13p6TeV
[2025-04-18 17:44:55]  status=None
[2025-04-18 17:44:55]  status_code=0
[2025-04-18 17:44:55]  storage_token=
[2025-04-18 17:44:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606293789/log.44075483._067115.job.log.tgz.1
[2025-04-18 17:44:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/5c/log.44075483._067115.job.log.tgz.1
[2025-04-18 17:44:55]  workdir=None
[2025-04-18 17:44:55] ]
[2025-04-18 17:44:55] 2025-04-18 21:44:28,393 | INFO     | transferring file log.44075483._067115.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606293789/log.44075483._067115.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 17:44:55] 2025-04-18 21:44:28,393 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606293789/log.44075483._067115.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._067115.job
[2025-04-18 17:44:55] 2025-04-18 21:44:28,416 | INFO     | adding to output.list: log.44075483._067115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/5c/log.44075483._067115.job.log.tg
[2025-04-18 17:44:55] 2025-04-18 21:44:28,417 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 17:44:55] 2025-04-18 21:44:28,417 | INFO     | summary of transferred files:
[2025-04-18 17:44:55] 2025-04-18 21:44:28,417 | INFO     |  -- lfn=log.44075483._067115.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 17:44:55] 2025-04-18 21:44:28,418 | INFO     | stage-out finished correctly
[2025-04-18 17:44:55] 2025-04-18 21:44:29,637 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 17:44:55] 2025-04-18 21:44:31,284 | INFO     | job 6606293789 has state=finished
[2025-04-18 17:44:55] 2025-04-18 21:44:31,284 | INFO     | preparing for final server update for job 6606293789 in state='finished'
[2025-04-18 17:44:55] 2025-04-18 21:44:31,285 | INFO     | this job has now completed (state=finished)
[2025-04-18 17:44:55] 2025-04-18 21:44:31,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 17:44:55] 2025-04-18 21:44:31,285 | INFO     | log transfer has been attempted: DONE
[2025-04-18 17:44:55] 2025-04-18 21:44:31,285 | INFO     | job 6606293789 has finished - writing final server update
[2025-04-18 17:44:55] 2025-04-18 21:44:31,286 | INFO     | total number of processed events: 400 (read)
[2025-04-18 17:44:55] 2025-04-18 21:44:31,287 | INFO     | executing command: lscpu
[2025-04-18 17:44:55] 2025-04-18 21:44:31,316 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 17:44:55] 2025-04-18 21:44:32,010 | WARNING  | process 6603 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 17:44:55] 2025-04-18 21:44:32,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606293789/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:44:55] 2025-04-18 21:44:32,099 | INFO     | number of running child processes to parent process 6603: 1
[2025-04-18 17:44:55] 2025-04-18 21:44:32,099 | INFO     | maximum number of monitored processes: 6
[2025-04-18 17:44:55] 2025-04-18 21:44:34,602 | INFO     | monitor loop #370: job 0:6606293789 is in state 'finished'
[2025-04-18 17:44:55] 2025-04-18 21:44:34,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:44:55] 2025-04-18 21:44:35,937 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 17:44:55] 2025-04-18 21:44:35,937 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606293789/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:44:55] 2025-04-18 21:44:35,938 | INFO     | extracted standard info from prmon json
[2025-04-18 17:44:55] 2025-04-18 21:44:35,938 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 17:44:55] 2025-04-18 21:44:35,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 17:44:55] 2025-04-18 21:44:35,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 17:44:55] 2025-04-18 21:44:35,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 17:44:55] 2025-04-18 21:44:35,941 | INFO     | fitting pss+swap vs Time
[2025-04-18 17:44:55] 2025-04-18 21:44:35,941 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 17:44:55] 2025-04-18 21:44:35,942 | INFO     | sum of deviations: 18221279805.0
[2025-04-18 17:44:55] 2025-04-18 21:44:35,942 | INFO     | mean x: 1745010272.5
[2025-04-18 17:44:55] 2025-04-18 21:44:35,942 | INFO     | mean y: 2673262.4864864866
[2025-04-18 17:44:55] 2025-04-18 21:44:35,942 | INFO     | -- intersect: -253091762784.09744
[2025-04-18 17:44:55] 2025-04-18 21:44:35,943 | INFO     | intersect: -253091762784.09744
[2025-04-18 17:44:55] 2025-04-18 21:44:35,943 | INFO     | chi2: 2.373575749890256
[2025-04-18 17:44:55] 2025-04-18 21:44:35,943 | INFO     | -- intersect: -253091762784.09744
[2025-04-18 17:44:55] 2025-04-18 21:44:35,943 | INFO     | current memory leak: 145.04 B/s (using 74 data points, chi2=2.37)
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | ..............................
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | . Timing measurements:
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | . get job = 0 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | . initial setup = 2 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | . payload setup = 7 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,944 | INFO     | . stage-in = 0 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,945 | INFO     | . payload execution = 4928 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,945 | INFO     | . stage-out = 0 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,945 | INFO     | . log creation = 0 s
[2025-04-18 17:44:55] 2025-04-18 21:44:35,945 | INFO     | ..............................
[2025-04-18 17:44:55] 2025-04-18 21:44:36,249 | INFO     | 
[2025-04-18 17:44:55] 2025-04-18 21:44:36,249 | INFO     | job summary report
[2025-04-18 17:44:55] 2025-04-18 21:44:36,249 | INFO     | --------------------------------------------------
[2025-04-18 17:44:55] 2025-04-18 21:44:36,249 | INFO     | PanDA job id: 6606293789
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | task id: 44075483
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | errors: (none)
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | pilot state: finished 
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | transexitcode: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:36,250 | INFO     | exeerrorcode: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | exeerrordiag: 
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | exitcode: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | exitmsg: OK
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | cpuconsumptiontime: 46052 s
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | nevents: 400
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | neventsw: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:36,251 | INFO     | pid: 6603
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | pgrp: 6603
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | corecount: 12
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | event service: False
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 4939: 2453206, 4940: 2462147, 4942: 2462203, 4948: 2462501}
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | --------------------------------------------------
[2025-04-18 17:44:55] 2025-04-18 21:44:36,252 | INFO     | 
[2025-04-18 17:44:55] 2025-04-18 21:44:36,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 17:44:55] 2025-04-18 21:44:36,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | job 6606293789 has completed (purged errors)
[2025-04-18 17:44:55] 2025-04-18 21:44:36,279 | INFO     | overall cleanup function is called
[2025-04-18 17:44:55] 2025-04-18 21:44:37,283 | INFO     | --- collectZombieJob: --- 10, [6603]
[2025-04-18 17:44:55] 2025-04-18 21:44:37,289 | INFO     | zombie collector waiting for pid 6603
[2025-04-18 17:44:55] 2025-04-18 21:44:37,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 17:44:55] 2025-04-18 21:44:37,289 | INFO     | collected zombie processes
[2025-04-18 17:44:55] 2025-04-18 21:44:37,290 | INFO     | will attempt to kill all subprocesses of pid=6603
[2025-04-18 17:44:55] 2025-04-18 21:44:37,381 | INFO     | process IDs to be killed: [6603] (in reverse order)
[2025-04-18 17:44:55] 2025-04-18 21:44:37,442 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 17:44:55] 2025-04-18 21:44:37,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 17:44:55] 2025-04-18 21:44:37,446 | INFO     | did not find any defunct processes belonging to 6603
[2025-04-18 17:44:55] 2025-04-18 21:44:37,449 | INFO     | did not find any defunct processes belonging to 6603
[2025-04-18 17:44:55] 2025-04-18 21:44:37,450 | INFO     | ready for new job
[2025-04-18 17:44:55] 2025-04-18 21:44:37,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 17:44:55] 2025-04-18 21:44:37,451 | INFO     | **************************************
[2025-04-18 17:44:55] 2025-04-18 21:44:37,451 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 17:44:55] 2025-04-18 21:44:37,451 | INFO     | **************************************
[2025-04-18 17:44:55] 2025-04-18 21:44:37,451 | INFO     | 
[2025-04-18 17:44:55] 2025-04-18 21:44:37,452 | INFO     | architecture information:
[2025-04-18 17:44:55] 2025-04-18 21:44:37,452 | INFO     | executing command: cat /etc/os-release
[2025-04-18 17:44:55] 2025-04-18 21:44:37,467 | INFO     | cat /etc/os-release:
[2025-04-18 17:44:55] NAME="CentOS Linux"
[2025-04-18 17:44:55] VERSION="7 (Core)"
[2025-04-18 17:44:55] ID="centos"
[2025-04-18 17:44:55] ID_LIKE="rhel fedora"
[2025-04-18 17:44:55] VERSION_ID="7"
[2025-04-18 17:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 17:44:55] ANSI_COLOR="0;31"
[2025-04-18 17:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 17:44:55] HOME_URL="https://www.centos.org/"
[2025-04-18 17:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 17:44:55] 
[2025-04-18 17:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 17:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 17:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 17:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 17:44:55] 
[2025-04-18 17:44:55] 2025-04-18 21:44:37,467 | INFO     | **************************************
[2025-04-18 17:44:55] 2025-04-18 21:44:37,970 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 17:44:55] 2025-04-18 21:44:37,986 | INFO     | sufficient remaining disk space (29397876736 B)
[2025-04-18 17:44:55] 2025-04-18 21:44:37,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 17:44:55] 2025-04-18 21:44:37,987 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 17:44:55] 2025-04-18 21:44:37,987 | INFO     | update_server=False
[2025-04-18 17:44:55] 2025-04-18 21:44:37,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 17:44:55] 2025-04-18 21:44:37,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:44:55] 2025-04-18 21:44:38,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:44:55] 2025-04-18 21:44:38,109 | INFO     | aborting loop
[2025-04-18 17:44:55] 2025-04-18 21:44:38,535 | INFO     | all payload control threads have been joined
[2025-04-18 17:44:55] 2025-04-18 21:44:38,544 | INFO     | PID=32486 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 17:44:55] 2025-04-18 21:44:38,544 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 17:44:55] 2025-04-18 21:44:38,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 17:44:55] 2025-04-18 21:44:38,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 17:44:55] 2025-04-18 21:44:38,680 | INFO     | all data control threads have been joined
[2025-04-18 17:44:55] 2025-04-18 21:44:38,992 | INFO     | [job] retrieve thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:38,993 | INFO     | [job] queue monitor thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 17:44:55] 2025-04-18 21:44:39,048 | INFO     | [job] validate thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,114 | INFO     | [job] job monitor thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,122 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,527 | INFO     | [payload] failed_post thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,541 | INFO     | [payload] control thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,592 | INFO     | all job control threads have been joined
[2025-04-18 17:44:55] 2025-04-18 21:44:39,627 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,685 | INFO     | [data] control thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,804 | INFO     | [data] copytool_in thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:39,876 | INFO     | [payload] validate_post thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:40,071 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:40,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 17:44:55] 2025-04-18 21:44:40,597 | INFO     | [job] control thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:41,028 | INFO     | [data] copytool_out thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:44,233 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:48,644 | INFO     | job.realtimelogging is not enabled
[2025-04-18 17:44:55] 2025-04-18 21:44:49,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 17:44:55] 2025-04-18 21:44:50,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637955970880)>', '<ExcThread(monitor, started 139636835874560)>']
[2025-04-18 17:44:55] 2025-04-18 21:44:50,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 17:44:55] 2025-04-18 21:44:50,604 | INFO     | [monitor] control thread has ended
[2025-04-18 17:44:55] 2025-04-18 21:44:55,168 | INFO     | all workflow threads have been joined
[2025-04-18 17:44:55] 2025-04-18 21:44:55,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 17:44:55] 2025-04-18 21:44:55,176 | INFO     | traces error code: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:55,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 17:44:55] 2025-04-18 21:44:55,268 [wrapper] ==== pilot stdout END ====
[2025-04-18 17:44:55] 2025-04-18 21:44:55,271 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 17:44:55] 2025-04-18 21:44:55,275 [wrapper] pilotpid: 32486
[2025-04-18 17:44:55] 2025-04-18 21:44:55,278 [wrapper] Pilot exit status: 0
[2025-04-18 17:44:55] 2025-04-18 21:44:55,294 [wrapper] pandaids: 6606293789
[2025-04-18 17:44:55] 2025-04-18 21:44:55,334 [wrapper] cleanup supervisor_pilot 14919 32487
[2025-04-18 17:44:55] 2025-04-18 21:44:55,338 [wrapper] Test setup, not cleaning
[2025-04-18 17:44:55] 2025-04-18 21:44:55,342 [wrapper] apfmon messages muted
[2025-04-18 17:44:55] 2025-04-18 21:44:55,346 [wrapper] ==== wrapper stdout END ====
[2025-04-18 17:44:55] 2025-04-18 21:44:55,350 [wrapper] ==== wrapper stderr END ====
[2025-04-18 17:44:55]  *** Error codes and diagnostics ***
[2025-04-18 17:44:55]     "exeErrorCode": 0,
[2025-04-18 17:44:55]     "exeErrorDiag": "",
[2025-04-18 17:44:55]     "pilotErrorCode": 0,
[2025-04-18 17:44:55]     "pilotErrorDiag": "",
[2025-04-18 17:44:55]  *** Listing of results directory ***
[2025-04-18 17:44:55] total 409804
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 04:46 pilot3.tar.gz
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 04:54 queuedata.json
[2025-04-18 17:44:55] -rwx------ 1 boincer umatlas     37140 Apr 18 04:58 runpilot2-wrapper.sh
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas       100 Apr 18 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 17:44:55] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 16:21 run_atlas
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas       105 Apr 18 16:21 job.xml
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas 222254975 Apr 18 16:21 EVNT.44075481._002608.pool.root.1
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 16:21 start_atlas.sh
[2025-04-18 17:44:55] drwxrwx--x 2 boincer umatlas      4096 Apr 18 16:21 shared
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 16:21 input.tar.gz
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas         0 Apr 18 16:21 boinc_lockfile
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 16:21 pandaJob.out
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas       424 Apr 18 16:21 setup.sh.local
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas    991292 Apr 18 16:21 agis_schedconf.cvmfs.json
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas   1618536 Apr 18 16:21 agis_ddmendpoints.agis.ALL.json
[2025-04-18 17:44:55] drwx------ 4 boincer umatlas      4096 Apr 18 16:21 pilot3
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 17:40 init_data.xml
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas        95 Apr 18 17:43 pilot_heartbeat.json
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas 191844943 Apr 18 17:43 HITS.44075483._067115.pool.root.1
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas       529 Apr 18 17:44 boinc_task_state.xml
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas      1049 Apr 18 17:44 memory_monitor_summary.json
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas    368443 Apr 18 17:44 log.44075483._067115.job.log.tgz.1
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas      7750 Apr 18 17:44 heartbeat.json
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas        27 Apr 18 17:44 wrapper_checkpoint.txt
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 17:44 boinc_mmap_file
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas      4742 Apr 18 17:44 pilotlog.txt
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas    470367 Apr 18 17:44 log.44075483._067115.job.log.1
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas       357 Apr 18 17:44 output.list
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas       620 Apr 18 17:44 runtime_log
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas    860160 Apr 18 17:44 result.tar.gz
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas       658 Apr 18 17:44 Z6ONDmPjwP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXveLDmmMoFTn.diag
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 17:44 runtime_log.err
[2025-04-18 17:44:55] -rw-r--r-- 1 boincer umatlas     21404 Apr 18 17:44 stderr.txt
[2025-04-18 17:44:55] HITS file was successfully produced:
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas 191844943 Apr 18 17:43 shared/HITS.pool.root.1
[2025-04-18 17:44:55]  *** Contents of shared directory: ***
[2025-04-18 17:44:55] total 405760
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas 222254975 Apr 18 16:21 ATLAS.root_0
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 16:21 start_atlas.sh
[2025-04-18 17:44:55] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 16:21 input.tar.gz
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas 191844943 Apr 18 17:43 HITS.pool.root.1
[2025-04-18 17:44:55] -rw------- 1 boincer umatlas    860160 Apr 18 17:44 result.tar.gz
17:44:57 (28862): run_atlas exited; CPU time 46033.516340
17:44:57 (28862): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN