Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:28:03 (505190): wrapper (7.7.26015): starting
07:28:03 (505190): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 07:28:03] Arguments: --nthreads 4
[2025-04-19 07:28:03] Threads: 4
[2025-04-19 07:28:03] Checking for CVMFS
[2025-04-19 07:28:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 07:28:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 07:28:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 07:28:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 07:28:04] 2.9.2.0 3037 1512 88688 145027 2 56 27572106 36864001 0 130560 0 1278757 99.992 322006 10051 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 07:28:04] CVMFS is ok
[2025-04-19 07:28:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 07:28:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 07:28:04] Further information can be found at the LHC@home message board.
[2025-04-19 07:28:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 07:28:04] Checking for apptainer binary...
[2025-04-19 07:28:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 07:28:04] Running /usr/bin/apptainer --version
[2025-04-19 07:28:04] apptainer version 1.3.6-6.1
[2025-04-19 07:28:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 07:28:04] thA338
[2025-04-19 07:28:04] apptainer works
[2025-04-19 07:28:04] Set ATHENA_PROC_NUMBER=4
[2025-04-19 07:28:04] Set ATHENA_CORE_NUMBER=4
[2025-04-19 07:28:04] Starting ATLAS job with PandaID=6606681916
[2025-04-19 07:28:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 08:46:56]  *** The last 200 lines of the pilot log: ***
[2025-04-19 08:46:56]  protocol_id=None
[2025-04-19 08:46:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 08:46:56]  replicas=None
[2025-04-19 08:46:56]  scope=mc23_13p6TeV
[2025-04-19 08:46:56]  status=None
[2025-04-19 08:46:56]  status_code=0
[2025-04-19 08:46:56]  storage_token=
[2025-04-19 08:46:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606681916/log.44075483._071775.job.log.tgz.1
[2025-04-19 08:46:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/d8/log.44075483._071775.job.log.tgz.1
[2025-04-19 08:46:56]  workdir=None
[2025-04-19 08:46:56] ]
[2025-04-19 08:46:56] 2025-04-19 06:46:29,380 | INFO     | transferring file log.44075483._071775.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606681916/log.44075483._071775.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 08:46:56] 2025-04-19 06:46:29,380 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606681916/log.44075483._071775.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0717
[2025-04-19 08:46:56] 2025-04-19 06:46:29,399 | INFO     | adding to output.list: log.44075483._071775.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/d8/log.44075483._071775.job.log.tg
[2025-04-19 08:46:56] 2025-04-19 06:46:29,400 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 08:46:56] 2025-04-19 06:46:29,400 | INFO     | summary of transferred files:
[2025-04-19 08:46:56] 2025-04-19 06:46:29,400 | INFO     |  -- lfn=log.44075483._071775.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 08:46:56] 2025-04-19 06:46:29,400 | INFO     | stage-out finished correctly
[2025-04-19 08:46:56] 2025-04-19 06:46:29,730 | INFO     | monitor loop #362: job 0:6606681916 is in state 'finished'
[2025-04-19 08:46:56] 2025-04-19 06:46:29,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:46:56] 2025-04-19 06:46:30,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 08:46:56] 2025-04-19 06:46:32,234 | INFO     | monitor loop #363: job 0:6606681916 is in state 'finished'
[2025-04-19 08:46:56] 2025-04-19 06:46:32,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:46:56] 2025-04-19 06:46:32,799 | INFO     | job 6606681916 has state=finished
[2025-04-19 08:46:56] 2025-04-19 06:46:32,799 | INFO     | preparing for final server update for job 6606681916 in state='finished'
[2025-04-19 08:46:56] 2025-04-19 06:46:32,800 | INFO     | this job has now completed (state=finished)
[2025-04-19 08:46:56] 2025-04-19 06:46:32,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 08:46:56] 2025-04-19 06:46:32,800 | INFO     | log transfer has been attempted: DONE
[2025-04-19 08:46:56] 2025-04-19 06:46:32,800 | INFO     | job 6606681916 has finished - writing final server update
[2025-04-19 08:46:56] 2025-04-19 06:46:32,800 | INFO     | total number of processed events: 400 (read)
[2025-04-19 08:46:56] 2025-04-19 06:46:32,802 | INFO     | executing command: lscpu
[2025-04-19 08:46:56] 2025-04-19 06:46:32,824 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 08:46:56] 2025-04-19 06:46:34,737 | INFO     | monitor loop #364: job 0:6606681916 is in state 'finished'
[2025-04-19 08:46:56] 2025-04-19 06:46:34,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,240 | INFO     | monitor loop #365: job 0:6606681916 is in state 'finished'
[2025-04-19 08:46:56] 2025-04-19 06:46:37,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,700 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 08:46:56] 2025-04-19 06:46:37,700 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606681916/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,701 | INFO     | extracted standard info from prmon json
[2025-04-19 08:46:56] 2025-04-19 06:46:37,701 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 08:46:56] 2025-04-19 06:46:37,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 08:46:56] 2025-04-19 06:46:37,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 08:46:56] 2025-04-19 06:46:37,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | fitting pss+swap vs Time
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | sum of square deviations: 106336877.5
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | sum of deviations: 3432174210.9999995
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | mean x: 1745042924.5
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | mean y: 2419649.0285714287
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | -- intersect: -56321326762.99975
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | intersect: -56321326762.99975
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | chi2: 1.0571513292641836
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | -- intersect: -56321326762.99975
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | current memory leak: 32.28 B/s (using 70 data points, chi2=1.06)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | ..............................
[2025-04-19 08:46:56] 2025-04-19 06:46:37,702 | INFO     | . Timing measurements:
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . get job = 0 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . initial setup = 1 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . payload setup = 4 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . stage-in = 0 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . payload execution = 4674 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . stage-out = 0 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | . log creation = 0 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,703 | INFO     | ..............................
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | 
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | job summary report
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | --------------------------------------------------
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | PanDA job id: 6606681916
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | task id: 44075483
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | errors: (none)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | pilot state: finished 
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | transexitcode: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | exeerrorcode: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | exeerrordiag: 
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | exitcode: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | exitmsg: OK
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | cpuconsumptiontime: 16014 s
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | nevents: 400
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | neventsw: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | pid: 515483
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | pgrp: 515483
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | corecount: 4
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | event service: False
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | sizes: {0: 2426654, 1: 2426853, 4: 2427059, 11: 2427087, 4682: 2453290, 4683: 2462237, 4684: 2462421, 4691: 2462591}
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | --------------------------------------------------
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | 
[2025-04-19 08:46:56] 2025-04-19 06:46:37,745 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | job 6606681916 has completed (purged errors)
[2025-04-19 08:46:56] 2025-04-19 06:46:37,765 | INFO     | overall cleanup function is called
[2025-04-19 08:46:56] 2025-04-19 06:46:38,307 | INFO     | 4707s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 08:46:56] 2025-04-19 06:46:38,772 | INFO     | --- collectZombieJob: --- 10, [515483]
[2025-04-19 08:46:56] 2025-04-19 06:46:38,772 | INFO     | zombie collector waiting for pid 515483
[2025-04-19 08:46:56] 2025-04-19 06:46:38,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 08:46:56] 2025-04-19 06:46:38,772 | INFO     | collected zombie processes
[2025-04-19 08:46:56] 2025-04-19 06:46:38,772 | INFO     | will attempt to kill all subprocesses of pid=515483
[2025-04-19 08:46:56] 2025-04-19 06:46:38,818 | INFO     | process IDs to be killed: [515483] (in reverse order)
[2025-04-19 08:46:56] 2025-04-19 06:46:38,853 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 08:46:56] 2025-04-19 06:46:38,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 08:46:56] 2025-04-19 06:46:38,855 | INFO     | did not find any defunct processes belonging to 515483
[2025-04-19 08:46:56] 2025-04-19 06:46:38,856 | INFO     | did not find any defunct processes belonging to 515483
[2025-04-19 08:46:56] 2025-04-19 06:46:38,856 | INFO     | ready for new job
[2025-04-19 08:46:56] 2025-04-19 06:46:38,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 08:46:56] 2025-04-19 06:46:38,857 | INFO     | **************************************
[2025-04-19 08:46:56] 2025-04-19 06:46:38,857 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 08:46:56] 2025-04-19 06:46:38,857 | INFO     | **************************************
[2025-04-19 08:46:56] 2025-04-19 06:46:38,857 | INFO     | 
[2025-04-19 08:46:56] 2025-04-19 06:46:38,858 | INFO     | architecture information:
[2025-04-19 08:46:56] 2025-04-19 06:46:38,858 | INFO     | executing command: cat /etc/os-release
[2025-04-19 08:46:56] 2025-04-19 06:46:38,872 | INFO     | cat /etc/os-release:
[2025-04-19 08:46:56] NAME="CentOS Linux"
[2025-04-19 08:46:56] VERSION="7 (Core)"
[2025-04-19 08:46:56] ID="centos"
[2025-04-19 08:46:56] ID_LIKE="rhel fedora"
[2025-04-19 08:46:56] VERSION_ID="7"
[2025-04-19 08:46:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 08:46:56] ANSI_COLOR="0;31"
[2025-04-19 08:46:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 08:46:56] HOME_URL="https://www.centos.org/"
[2025-04-19 08:46:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 08:46:56] 
[2025-04-19 08:46:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 08:46:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 08:46:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 08:46:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 08:46:56] 
[2025-04-19 08:46:56] 2025-04-19 06:46:38,873 | INFO     | **************************************
[2025-04-19 08:46:56] 2025-04-19 06:46:39,376 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | INFO     | sufficient remaining disk space (227561963520 B)
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | INFO     | update_server=False
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:46:56] 2025-04-19 06:46:39,395 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 08:46:56] 2025-04-19 06:46:39,396 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 08:46:56] 2025-04-19 06:46:39,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 08:46:56] 2025-04-19 06:46:39,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 08:46:56] 2025-04-19 06:46:39,580 | INFO     | all job control threads have been joined
[2025-04-19 08:46:56] 2025-04-19 06:46:39,744 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 08:46:56] 2025-04-19 06:46:39,744 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 08:46:56] 2025-04-19 06:46:39,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:46:56] 2025-04-19 06:46:39,744 | INFO     | will abort loop
[2025-04-19 08:46:56] 2025-04-19 06:46:39,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 08:46:56] 2025-04-19 06:46:40,401 | INFO     | [job] queue monitor thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:40,401 | INFO     | [job] retrieve thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:40,411 | INFO     | all data control threads have been joined
[2025-04-19 08:46:56] 2025-04-19 06:46:40,489 | INFO     | all payload control threads have been joined
[2025-04-19 08:46:56] 2025-04-19 06:46:40,493 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:40,549 | INFO     | [data] copytool_in thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:40,586 | INFO     | [job] control thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:40,746 | INFO     | [job] job monitor thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,220 | INFO     | [job] validate thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,238 | INFO     | [payload] validate_post thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,277 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,355 | INFO     | [payload] failed_post thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,387 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 08:46:56] 2025-04-19 06:46:41,417 | INFO     | [data] control thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,495 | INFO     | [payload] control thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:41,964 | INFO     | [data] copytool_out thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:45,409 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:50,143 | INFO     | job.realtimelogging is not enabled
[2025-04-19 08:46:56] 2025-04-19 06:46:51,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 08:46:56] 2025-04-19 06:46:51,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610688100160)>', '<ExcThread(monitor, started 140609302030080)>']
[2025-04-19 08:46:56] 2025-04-19 06:46:52,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 08:46:56] 2025-04-19 06:46:52,465 | INFO     | [monitor] control thread has ended
[2025-04-19 08:46:56] 2025-04-19 06:46:56,733 | INFO     | all workflow threads have been joined
[2025-04-19 08:46:56] 2025-04-19 06:46:56,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 08:46:56] 2025-04-19 06:46:56,733 | INFO     | traces error code: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:56,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 08:46:56] 2025-04-19 06:46:56,816 [wrapper] ==== pilot stdout END ====
[2025-04-19 08:46:56] 2025-04-19 06:46:56,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 08:46:56] 2025-04-19 06:46:56,825 [wrapper] pilotpid: 508923
[2025-04-19 08:46:56] 2025-04-19 06:46:56,829 [wrapper] Pilot exit status: 0
[2025-04-19 08:46:56] 2025-04-19 06:46:56,841 [wrapper] pandaids: 6606681916
[2025-04-19 08:46:56] 2025-04-19 06:46:56,865 [wrapper] cleanup supervisor_pilot  527672 508924
[2025-04-19 08:46:56] 2025-04-19 06:46:56,869 [wrapper] Test setup, not cleaning
[2025-04-19 08:46:56] 2025-04-19 06:46:56,873 [wrapper] apfmon messages muted
[2025-04-19 08:46:56] 2025-04-19 06:46:56,878 [wrapper] ==== wrapper stdout END ====
[2025-04-19 08:46:56] 2025-04-19 06:46:56,882 [wrapper] ==== wrapper stderr END ====
[2025-04-19 08:46:56]  *** Error codes and diagnostics ***
[2025-04-19 08:46:56]     "exeErrorCode": 0,
[2025-04-19 08:46:56]     "exeErrorDiag": "",
[2025-04-19 08:46:56]     "pilotErrorCode": 0,
[2025-04-19 08:46:56]     "pilotErrorDiag": "",
[2025-04-19 08:46:56]  *** Listing of results directory ***
[2025-04-19 08:46:56] total 419164
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc    495897 Apr 18 18:42 pilot3.tar.gz
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc      5111 Apr 18 18:57 queuedata.json
[2025-04-19 08:46:56] -rwx------ 1 boinc boinc     37140 Apr 18 18:58 runpilot2-wrapper.sh
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc       100 Apr 19 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 08:46:56] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 07:28 run_atlas
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc       105 Apr 19 07:28 job.xml
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc 225568806 Apr 19 07:28 EVNT.44075481._002788.pool.root.1
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc      6859 Apr 19 07:28 init_data.xml
[2025-04-19 08:46:56] drwxrwx--x 2 boinc boinc      4096 Apr 19 07:28 shared
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc    508893 Apr 19 07:28 input.tar.gz
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc     17569 Apr 19 07:28 start_atlas.sh
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc         0 Apr 19 07:28 boinc_lockfile
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc      2578 Apr 19 07:28 pandaJob.out
[2025-04-19 08:46:56] -rw------- 1 boinc boinc       424 Apr 19 07:28 setup.sh.local
[2025-04-19 08:46:56] -rw------- 1 boinc boinc    991292 Apr 19 07:28 agis_schedconf.cvmfs.json
[2025-04-19 08:46:56] -rw------- 1 boinc boinc   1618536 Apr 19 07:28 agis_ddmendpoints.agis.ALL.json
[2025-04-19 08:46:56] drwx------ 4 boinc boinc      4096 Apr 19 07:28 pilot3
[2025-04-19 08:46:56] -rw------- 1 boinc boinc 198404897 Apr 19 08:46 HITS.44075483._071775.pool.root.1
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc       529 Apr 19 08:46 boinc_task_state.xml
[2025-04-19 08:46:56] -rw------- 1 boinc boinc      1034 Apr 19 08:46 memory_monitor_summary.json
[2025-04-19 08:46:56] -rw------- 1 boinc boinc    229624 Apr 19 08:46 log.44075483._071775.job.log.tgz.1
[2025-04-19 08:46:56] -rw------- 1 boinc boinc        95 Apr 19 08:46 pilot_heartbeat.json
[2025-04-19 08:46:56] -rw------- 1 boinc boinc      7664 Apr 19 08:46 heartbeat.json
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc      8192 Apr 19 08:46 boinc_mmap_file
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc        27 Apr 19 08:46 wrapper_checkpoint.txt
[2025-04-19 08:46:56] -rw------- 1 boinc boinc      4738 Apr 19 08:46 pilotlog.txt
[2025-04-19 08:46:56] -rw------- 1 boinc boinc    460412 Apr 19 08:46 log.44075483._071775.job.log.1
[2025-04-19 08:46:56] -rw------- 1 boinc boinc       357 Apr 19 08:46 output.list
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc       620 Apr 19 08:46 runtime_log
[2025-04-19 08:46:56] -rw------- 1 boinc boinc    706560 Apr 19 08:46 result.tar.gz
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc     11099 Apr 19 08:46 runtime_log.err
[2025-04-19 08:46:56] -rw------- 1 boinc boinc       658 Apr 19 08:46 TfVNDm7D4P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmZkfLDmS0kzNn.diag
[2025-04-19 08:46:56] -rw-r--r-- 1 boinc boinc     21723 Apr 19 08:46 stderr.txt
[2025-04-19 08:46:56] HITS file was successfully produced:
[2025-04-19 08:46:56] -rw------- 1 boinc boinc 198404897 Apr 19 08:46 shared/HITS.pool.root.1
[2025-04-19 08:46:56]  *** Contents of shared directory: ***
[2025-04-19 08:46:56] total 415260
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc 225568806 Apr 19 07:28 ATLAS.root_0
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc    508893 Apr 19 07:28 input.tar.gz
[2025-04-19 08:46:56] -rw-r--r-- 2 boinc boinc     17569 Apr 19 07:28 start_atlas.sh
[2025-04-19 08:46:56] -rw------- 1 boinc boinc 198404897 Apr 19 08:46 HITS.pool.root.1
[2025-04-19 08:46:56] -rw------- 1 boinc boinc    706560 Apr 19 08:46 result.tar.gz
08:46:58 (505190): run_atlas exited; CPU time 16029.394050
08:46:58 (505190): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN