Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:44:09 (1993): wrapper (7.7.26015): starting
15:44:09 (1993): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 15:44:09] Arguments: --nthreads 12
[2025-04-18 15:44:09] Threads: 12
[2025-04-18 15:44:09] Checking for CVMFS
[2025-04-18 15:44:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 15:44:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 15:44:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 15:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 15:44:10] 2.11.2.0 28060 386055 170496 145013 2 56 10347845 20275200 1 130560 0 23257075 99.970 7486257 53800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 15:44:10] CVMFS is ok
[2025-04-18 15:44:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 15:44:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 15:44:10] Further information can be found at the LHC@home message board.
[2025-04-18 15:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 15:44:10] Checking for apptainer binary...
[2025-04-18 15:44:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 15:44:10] Running /usr/bin/apptainer --version
[2025-04-18 15:44:10] apptainer version 1.3.2-1.el7
[2025-04-18 15:44:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 15:44:11] c-205-23.aglt2.org
[2025-04-18 15:44:11] apptainer works
[2025-04-18 15:44:11] Set ATHENA_PROC_NUMBER=12
[2025-04-18 15:44:11] Set ATHENA_CORE_NUMBER=12
[2025-04-18 15:44:11] Starting ATLAS job with PandaID=6606654444
[2025-04-18 15:44:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 17:09:49]  *** The last 200 lines of the pilot log: ***
[2025-04-18 17:09:49]  lfn=log.44075483._071618.job.log.tgz.1
[2025-04-18 17:09:49]  mtime=0
[2025-04-18 17:09:49]  protocol_id=None
[2025-04-18 17:09:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 17:09:49]  replicas=None
[2025-04-18 17:09:49]  scope=mc23_13p6TeV
[2025-04-18 17:09:49]  status=None
[2025-04-18 17:09:49]  status_code=0
[2025-04-18 17:09:49]  storage_token=
[2025-04-18 17:09:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606654444/log.44075483._071618.job.log.tgz.1
[2025-04-18 17:09:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/ad/log.44075483._071618.job.log.tgz.1
[2025-04-18 17:09:49]  workdir=None
[2025-04-18 17:09:49] ]
[2025-04-18 17:09:49] 2025-04-18 21:09:22,198 | INFO     | transferring file log.44075483._071618.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606654444/log.44075483._071618.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 17:09:49] 2025-04-18 21:09:22,198 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606654444/log.44075483._071618.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._071618.job
[2025-04-18 17:09:49] 2025-04-18 21:09:22,220 | INFO     | adding to output.list: log.44075483._071618.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/ad/log.44075483._071618.job.log.tg
[2025-04-18 17:09:49] 2025-04-18 21:09:22,221 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 17:09:49] 2025-04-18 21:09:22,222 | INFO     | summary of transferred files:
[2025-04-18 17:09:49] 2025-04-18 21:09:22,222 | INFO     |  -- lfn=log.44075483._071618.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 17:09:49] 2025-04-18 21:09:22,222 | INFO     | stage-out finished correctly
[2025-04-18 17:09:49] 2025-04-18 21:09:22,576 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 17:09:49] 2025-04-18 21:09:22,984 | WARNING  | process 12022 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 17:09:49] 2025-04-18 21:09:22,984 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606654444/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:09:49] 2025-04-18 21:09:23,073 | INFO     | number of running child processes to parent process 12022: 1
[2025-04-18 17:09:49] 2025-04-18 21:09:23,074 | INFO     | maximum number of monitored processes: 6
[2025-04-18 17:09:49] 2025-04-18 21:09:24,480 | INFO     | job 6606654444 has state=finished
[2025-04-18 17:09:49] 2025-04-18 21:09:24,480 | INFO     | preparing for final server update for job 6606654444 in state='finished'
[2025-04-18 17:09:49] 2025-04-18 21:09:24,480 | INFO     | this job has now completed (state=finished)
[2025-04-18 17:09:49] 2025-04-18 21:09:24,480 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 17:09:49] 2025-04-18 21:09:24,481 | INFO     | log transfer has been attempted: DONE
[2025-04-18 17:09:49] 2025-04-18 21:09:24,481 | INFO     | job 6606654444 has finished - writing final server update
[2025-04-18 17:09:49] 2025-04-18 21:09:24,481 | INFO     | total number of processed events: 400 (read)
[2025-04-18 17:09:49] 2025-04-18 21:09:24,483 | INFO     | executing command: lscpu
[2025-04-18 17:09:49] 2025-04-18 21:09:24,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 17:09:49] 2025-04-18 21:09:25,576 | INFO     | monitor loop #381: job 0:6606654444 is in state 'finished'
[2025-04-18 17:09:49] 2025-04-18 21:09:25,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:09:49] 2025-04-18 21:09:26,422 | INFO     | PID=5654 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 17:09:49] 2025-04-18 21:09:28,079 | INFO     | monitor loop #382: job 0:6606654444 is in state 'finished'
[2025-04-18 17:09:49] 2025-04-18 21:09:28,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,225 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 17:09:49] 2025-04-18 21:09:29,225 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606654444/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,226 | INFO     | extracted standard info from prmon json
[2025-04-18 17:09:49] 2025-04-18 21:09:29,226 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 17:09:49] 2025-04-18 21:09:29,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 17:09:49] 2025-04-18 21:09:29,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 17:09:49] 2025-04-18 21:09:29,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 17:09:49] 2025-04-18 21:09:29,229 | INFO     | fitting pss+swap vs Time
[2025-04-18 17:09:49] 2025-04-18 21:09:29,229 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | sum of deviations: 19319496233.0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | mean x: 1745008086.5
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | mean y: 2578053.289473684
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | -- intersect: -247710671651.49548
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | intersect: -247710671651.49548
[2025-04-18 17:09:49] 2025-04-18 21:09:29,230 | INFO     | chi2: 2.1661010202868667
[2025-04-18 17:09:49] 2025-04-18 21:09:29,231 | INFO     | -- intersect: -247710671651.49548
[2025-04-18 17:09:49] 2025-04-18 21:09:29,231 | INFO     | current memory leak: 141.96 B/s (using 76 data points, chi2=2.17)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,231 | INFO     | ..............................
[2025-04-18 17:09:49] 2025-04-18 21:09:29,231 | INFO     | . Timing measurements:
[2025-04-18 17:09:49] 2025-04-18 21:09:29,231 | INFO     | . get job = 0 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . initial setup = 3 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . payload setup = 7 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . stage-in = 0 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . payload execution = 5067 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . stage-out = 0 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | . log creation = 0 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,232 | INFO     | ..............................
[2025-04-18 17:09:49] 2025-04-18 21:09:29,685 | INFO     | 
[2025-04-18 17:09:49] 2025-04-18 21:09:29,686 | INFO     | job summary report
[2025-04-18 17:09:49] 2025-04-18 21:09:29,686 | INFO     | --------------------------------------------------
[2025-04-18 17:09:49] 2025-04-18 21:09:29,686 | INFO     | PanDA job id: 6606654444
[2025-04-18 17:09:49] 2025-04-18 21:09:29,686 | INFO     | task id: 44075483
[2025-04-18 17:09:49] 2025-04-18 21:09:29,686 | INFO     | errors: (none)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | pilot state: finished 
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | transexitcode: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | exeerrorcode: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | exeerrordiag: 
[2025-04-18 17:09:49] 2025-04-18 21:09:29,687 | INFO     | exitcode: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | exitmsg: OK
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | cpuconsumptiontime: 48447 s
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | nevents: 400
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | neventsw: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | pid: 12022
[2025-04-18 17:09:49] 2025-04-18 21:09:29,688 | INFO     | pgrp: 12022
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | corecount: 12
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | event service: False
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | sizes: {0: 2425996, 1: 2426852, 6: 2427058, 12: 2427086, 5079: 2453291, 5081: 2462232, 5082: 2462416, 5088: 2462586}
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | --------------------------------------------------
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | 
[2025-04-18 17:09:49] 2025-04-18 21:09:29,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 17:09:49] 2025-04-18 21:09:29,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 17:09:49] 2025-04-18 21:09:29,718 | INFO     | job 6606654444 has completed (purged errors)
[2025-04-18 17:09:49] 2025-04-18 21:09:29,719 | INFO     | overall cleanup function is called
[2025-04-18 17:09:49] 2025-04-18 21:09:30,726 | INFO     | --- collectZombieJob: --- 10, [12022]
[2025-04-18 17:09:49] 2025-04-18 21:09:30,727 | INFO     | zombie collector waiting for pid 12022
[2025-04-18 17:09:49] 2025-04-18 21:09:30,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 17:09:49] 2025-04-18 21:09:30,727 | INFO     | collected zombie processes
[2025-04-18 17:09:49] 2025-04-18 21:09:30,727 | INFO     | will attempt to kill all subprocesses of pid=12022
[2025-04-18 17:09:49] 2025-04-18 21:09:30,820 | INFO     | process IDs to be killed: [12022] (in reverse order)
[2025-04-18 17:09:49] 2025-04-18 21:09:30,870 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 17:09:49] 2025-04-18 21:09:30,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 17:09:49] 2025-04-18 21:09:30,874 | INFO     | did not find any defunct processes belonging to 12022
[2025-04-18 17:09:49] 2025-04-18 21:09:30,878 | INFO     | did not find any defunct processes belonging to 12022
[2025-04-18 17:09:49] 2025-04-18 21:09:30,878 | INFO     | ready for new job
[2025-04-18 17:09:49] 2025-04-18 21:09:30,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 17:09:49] 2025-04-18 21:09:30,879 | INFO     | **************************************
[2025-04-18 17:09:49] 2025-04-18 21:09:30,879 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 17:09:49] 2025-04-18 21:09:30,879 | INFO     | **************************************
[2025-04-18 17:09:49] 2025-04-18 21:09:30,880 | INFO     | 
[2025-04-18 17:09:49] 2025-04-18 21:09:30,880 | INFO     | architecture information:
[2025-04-18 17:09:49] 2025-04-18 21:09:30,881 | INFO     | executing command: cat /etc/os-release
[2025-04-18 17:09:49] 2025-04-18 21:09:30,895 | INFO     | cat /etc/os-release:
[2025-04-18 17:09:49] NAME="CentOS Linux"
[2025-04-18 17:09:49] VERSION="7 (Core)"
[2025-04-18 17:09:49] ID="centos"
[2025-04-18 17:09:49] ID_LIKE="rhel fedora"
[2025-04-18 17:09:49] VERSION_ID="7"
[2025-04-18 17:09:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 17:09:49] ANSI_COLOR="0;31"
[2025-04-18 17:09:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 17:09:49] HOME_URL="https://www.centos.org/"
[2025-04-18 17:09:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 17:09:49] 
[2025-04-18 17:09:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 17:09:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 17:09:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 17:09:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 17:09:49] 
[2025-04-18 17:09:49] 2025-04-18 21:09:30,895 | INFO     | **************************************
[2025-04-18 17:09:49] 2025-04-18 21:09:31,398 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 17:09:49] 2025-04-18 21:09:31,414 | INFO     | sufficient remaining disk space (29379002368 B)
[2025-04-18 17:09:49] 2025-04-18 21:09:31,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 17:09:49] 2025-04-18 21:09:31,415 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 17:09:49] 2025-04-18 21:09:31,415 | INFO     | update_server=False
[2025-04-18 17:09:49] 2025-04-18 21:09:31,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 17:09:49] 2025-04-18 21:09:31,415 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 17:09:49] 2025-04-18 21:09:31,416 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 17:09:49] 2025-04-18 21:09:31,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 17:09:49] 2025-04-18 21:09:31,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 17:09:49] 2025-04-18 21:09:31,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:09:49] 2025-04-18 21:09:31,587 | INFO     | aborting loop
[2025-04-18 17:09:49] 2025-04-18 21:09:31,698 | INFO     | all job control threads have been joined
[2025-04-18 17:09:49] 2025-04-18 21:09:31,992 | INFO     | all data control threads have been joined
[2025-04-18 17:09:49] 2025-04-18 21:09:32,393 | INFO     | all payload control threads have been joined
[2025-04-18 17:09:49] 2025-04-18 21:09:32,420 | INFO     | [job] retrieve thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,580 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,599 | INFO     | [job] job monitor thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,703 | INFO     | [job] control thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 17:09:49] 2025-04-18 21:09:32,947 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,975 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:32,997 | INFO     | [data] control thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:33,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 17:09:49] 2025-04-18 21:09:33,196 | INFO     | [data] copytool_in thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:33,399 | INFO     | [payload] control thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:33,866 | INFO     | [payload] validate_post thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:33,869 | INFO     | [job] validate thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:33,956 | INFO     | [payload] failed_post thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:34,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:09:49] 2025-04-18 21:09:34,829 | INFO     | [data] copytool_out thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:35,331 | INFO     | [job] queue monitor thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:37,173 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:41,753 | INFO     | job.realtimelogging is not enabled
[2025-04-18 17:09:49] 2025-04-18 21:09:42,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 17:09:49] 2025-04-18 21:09:43,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405945562944)>', '<ExcThread(monitor, started 140405232367360)>']
[2025-04-18 17:09:49] 2025-04-18 21:09:44,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 17:09:49] 2025-04-18 21:09:44,484 | INFO     | [monitor] control thread has ended
[2025-04-18 17:09:49] 2025-04-18 21:09:48,972 | INFO     | all workflow threads have been joined
[2025-04-18 17:09:49] 2025-04-18 21:09:48,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 17:09:49] 2025-04-18 21:09:48,973 | INFO     | traces error code: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:48,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 17:09:49] 2025-04-18 21:09:49,076 [wrapper] ==== pilot stdout END ====
[2025-04-18 17:09:49] 2025-04-18 21:09:49,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 17:09:49] 2025-04-18 21:09:49,084 [wrapper] pilotpid: 5654
[2025-04-18 17:09:49] 2025-04-18 21:09:49,087 [wrapper] Pilot exit status: 0
[2025-04-18 17:09:49] 2025-04-18 21:09:49,103 [wrapper] pandaids: 6606654444
[2025-04-18 17:09:49] 2025-04-18 21:09:49,143 [wrapper] cleanup supervisor_pilot 28526 5655
[2025-04-18 17:09:49] 2025-04-18 21:09:49,147 [wrapper] Test setup, not cleaning
[2025-04-18 17:09:49] 2025-04-18 21:09:49,151 [wrapper] apfmon messages muted
[2025-04-18 17:09:49] 2025-04-18 21:09:49,155 [wrapper] ==== wrapper stdout END ====
[2025-04-18 17:09:49] 2025-04-18 21:09:49,159 [wrapper] ==== wrapper stderr END ====
[2025-04-18 17:09:49]  *** Error codes and diagnostics ***
[2025-04-18 17:09:49]     "exeErrorCode": 0,
[2025-04-18 17:09:49]     "exeErrorDiag": "",
[2025-04-18 17:09:49]     "pilotErrorCode": 0,
[2025-04-18 17:09:49]     "pilotErrorDiag": "",
[2025-04-18 17:09:49]  *** Listing of results directory ***
[2025-04-18 17:09:49] total 427800
[2025-04-18 17:09:49] -rwx------ 1 boincer umatlas     37140 Apr 18 12:42 runpilot2-wrapper.sh
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 12:42 queuedata.json
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 12:42 pilot3.tar.gz
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas       100 Apr 18 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 17:09:49] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 15:44 run_atlas
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas       105 Apr 18 15:44 job.xml
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas 226970086 Apr 18 15:44 EVNT.44075481._002782.pool.root.1
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:44 start_atlas.sh
[2025-04-18 17:09:49] drwxrwx--x 2 boincer umatlas      4096 Apr 18 15:44 shared
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas    508879 Apr 18 15:44 input.tar.gz
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas         0 Apr 18 15:44 boinc_lockfile
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 15:44 pandaJob.out
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas       424 Apr 18 15:44 setup.sh.local
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas    991292 Apr 18 15:44 agis_schedconf.cvmfs.json
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas   1618536 Apr 18 15:44 agis_ddmendpoints.agis.ALL.json
[2025-04-18 17:09:49] drwx------ 4 boincer umatlas      4096 Apr 18 15:44 pilot3
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 17:00 init_data.xml
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas 205529631 Apr 18 17:08 HITS.44075483._071618.pool.root.1
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas       529 Apr 18 17:08 boinc_task_state.xml
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas      1049 Apr 18 17:09 memory_monitor_summary.json
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas    366463 Apr 18 17:09 log.44075483._071618.job.log.tgz.1
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 17:09 boinc_mmap_file
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas        27 Apr 18 17:09 wrapper_checkpoint.txt
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas        95 Apr 18 17:09 pilot_heartbeat.json
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas      7755 Apr 18 17:09 heartbeat.json
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas      4548 Apr 18 17:09 pilotlog.txt
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas    483518 Apr 18 17:09 log.44075483._071618.job.log.1
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas       357 Apr 18 17:09 output.list
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas       620 Apr 18 17:09 runtime_log
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas    870400 Apr 18 17:09 result.tar.gz
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 17:09 runtime_log.err
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas       658 Apr 18 17:09 QqBMDmxy3P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFjfLDmftZnMn.diag
[2025-04-18 17:09:49] -rw-r--r-- 1 boincer umatlas     21673 Apr 18 17:09 stderr.txt
[2025-04-18 17:09:49] HITS file was successfully produced:
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas 205529631 Apr 18 17:08 shared/HITS.pool.root.1
[2025-04-18 17:09:49]  *** Contents of shared directory: ***
[2025-04-18 17:09:49] total 423740
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas 226970086 Apr 18 15:44 ATLAS.root_0
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:44 start_atlas.sh
[2025-04-18 17:09:49] -rw-r--r-- 2 boincer umatlas    508879 Apr 18 15:44 input.tar.gz
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas 205529631 Apr 18 17:08 HITS.pool.root.1
[2025-04-18 17:09:49] -rw------- 1 boincer umatlas    870400 Apr 18 17:09 result.tar.gz
17:09:50 (1993): run_atlas exited; CPU time 48426.788229
17:09:50 (1993): called boinc_finish(0)

</stderr_txt>
]]>

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