Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:42:34 (16891): wrapper (7.7.26015): starting
15:42:34 (16891): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 15:42:34] Arguments: --nthreads 12
[2025-04-18 15:42:34] Threads: 12
[2025-04-18 15:42:34] Checking for CVMFS
[2025-04-18 15:42:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 15:42:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 15:42:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 15:42:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 15:42:34] 2.11.2.0 14409 377193 167868 145013 1 55 18143146 20275201 1 130560 0 23279410 99.990 6987266 54718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 15:42:34] CVMFS is ok
[2025-04-18 15:42:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 15:42:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 15:42:34] Further information can be found at the LHC@home message board.
[2025-04-18 15:42:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 15:42:34] Checking for apptainer binary...
[2025-04-18 15:42:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 15:42:34] Running /usr/bin/apptainer --version
[2025-04-18 15:42:34] apptainer version 1.3.2-1.el7
[2025-04-18 15:42:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 15:42:35] c-205-32.aglt2.org
[2025-04-18 15:42:35] apptainer works
[2025-04-18 15:42:35] Set ATHENA_PROC_NUMBER=12
[2025-04-18 15:42:35] Set ATHENA_CORE_NUMBER=12
[2025-04-18 15:42:35] Starting ATLAS job with PandaID=6606654468
[2025-04-18 15:42:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 17:07:00]  *** The last 200 lines of the pilot log: ***
[2025-04-18 17:07:00]  protocol_id=None
[2025-04-18 17:07:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 17:07:00]  replicas=None
[2025-04-18 17:07:00]  scope=mc23_13p6TeV
[2025-04-18 17:07:00]  status=None
[2025-04-18 17:07:00]  status_code=0
[2025-04-18 17:07:00]  storage_token=
[2025-04-18 17:07:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606654468/log.44075483._071642.job.log.tgz.1
[2025-04-18 17:07:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/72/log.44075483._071642.job.log.tgz.1
[2025-04-18 17:07:00]  workdir=None
[2025-04-18 17:07:00] ]
[2025-04-18 17:07:00] 2025-04-18 21:06:30,074 | INFO     | transferring file log.44075483._071642.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606654468/log.44075483._071642.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 17:07:00] 2025-04-18 21:06:30,074 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606654468/log.44075483._071642.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._071642.job
[2025-04-18 17:07:00] 2025-04-18 21:06:30,097 | INFO     | adding to output.list: log.44075483._071642.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/72/log.44075483._071642.job.log.tg
[2025-04-18 17:07:00] 2025-04-18 21:06:30,098 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 17:07:00] 2025-04-18 21:06:30,098 | INFO     | summary of transferred files:
[2025-04-18 17:07:00] 2025-04-18 21:06:30,099 | INFO     |  -- lfn=log.44075483._071642.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 17:07:00] 2025-04-18 21:06:30,099 | INFO     | stage-out finished correctly
[2025-04-18 17:07:00] 2025-04-18 21:06:30,256 | WARNING  | process 26941 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 17:07:00] 2025-04-18 21:06:30,257 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606654468/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:07:00] 2025-04-18 21:06:30,344 | INFO     | number of running child processes to parent process 26941: 1
[2025-04-18 17:07:00] 2025-04-18 21:06:30,344 | INFO     | maximum number of monitored processes: 6
[2025-04-18 17:07:00] 2025-04-18 21:06:32,847 | INFO     | monitor loop #374: job 0:6606654468 is in state 'finished'
[2025-04-18 17:07:00] 2025-04-18 21:06:32,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:07:00] 2025-04-18 21:06:33,582 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 17:07:00] 2025-04-18 21:06:35,350 | INFO     | monitor loop #375: job 0:6606654468 is in state 'finished'
[2025-04-18 17:07:00] 2025-04-18 21:06:35,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:07:00] 2025-04-18 21:06:35,653 | INFO     | job 6606654468 has state=finished
[2025-04-18 17:07:00] 2025-04-18 21:06:35,654 | INFO     | preparing for final server update for job 6606654468 in state='finished'
[2025-04-18 17:07:00] 2025-04-18 21:06:35,654 | INFO     | this job has now completed (state=finished)
[2025-04-18 17:07:00] 2025-04-18 21:06:35,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 17:07:00] 2025-04-18 21:06:35,654 | INFO     | log transfer has been attempted: DONE
[2025-04-18 17:07:00] 2025-04-18 21:06:35,655 | INFO     | job 6606654468 has finished - writing final server update
[2025-04-18 17:07:00] 2025-04-18 21:06:35,655 | INFO     | total number of processed events: 400 (read)
[2025-04-18 17:07:00] 2025-04-18 21:06:35,656 | INFO     | executing command: lscpu
[2025-04-18 17:07:00] 2025-04-18 21:06:35,684 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 17:07:00] 2025-04-18 21:06:37,853 | INFO     | monitor loop #376: job 0:6606654468 is in state 'finished'
[2025-04-18 17:07:00] 2025-04-18 21:06:37,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,212 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 17:07:00] 2025-04-18 21:06:40,213 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606654468/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,213 | INFO     | extracted standard info from prmon json
[2025-04-18 17:07:00] 2025-04-18 21:06:40,214 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 17:07:00] 2025-04-18 21:06:40,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 17:07:00] 2025-04-18 21:06:40,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 17:07:00] 2025-04-18 21:06:40,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 17:07:00] 2025-04-18 21:06:40,217 | INFO     | fitting pss+swap vs Time
[2025-04-18 17:07:00] 2025-04-18 21:06:40,217 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,218 | INFO     | sum of deviations: 19484747001.999996
[2025-04-18 17:07:00] 2025-04-18 21:06:40,218 | INFO     | mean x: 1745007959.0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,218 | INFO     | mean y: 2579052.453333333
[2025-04-18 17:07:00] 2025-04-18 21:06:40,218 | INFO     | -- intersect: -259957813350.2939
[2025-04-18 17:07:00] 2025-04-18 21:06:40,218 | INFO     | intersect: -259957813350.2939
[2025-04-18 17:07:00] 2025-04-18 21:06:40,219 | INFO     | chi2: 2.172491309751949
[2025-04-18 17:07:00] 2025-04-18 21:06:40,219 | INFO     | -- intersect: -259957813350.2939
[2025-04-18 17:07:00] 2025-04-18 21:06:40,219 | INFO     | current memory leak: 148.97 B/s (using 75 data points, chi2=2.17)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | ..............................
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . Timing measurements:
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . get job = 0 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . initial setup = 2 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . payload setup = 7 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . stage-in = 0 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . payload execution = 4993 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,220 | INFO     | . stage-out = 0 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,221 | INFO     | . log creation = 0 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,221 | INFO     | ..............................
[2025-04-18 17:07:00] 2025-04-18 21:06:40,480 | INFO     | 
[2025-04-18 17:07:00] 2025-04-18 21:06:40,480 | INFO     | job summary report
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | --------------------------------------------------
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | PanDA job id: 6606654468
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | task id: 44075483
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | errors: (none)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 17:07:00] 2025-04-18 21:06:40,481 | INFO     | pilot state: finished 
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | transexitcode: 0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | exeerrorcode: 0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | exeerrordiag: 
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | exitcode: 0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | exitmsg: OK
[2025-04-18 17:07:00] 2025-04-18 21:06:40,482 | INFO     | cpuconsumptiontime: 46112 s
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | nevents: 400
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | neventsw: 0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | pid: 26941
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | pgrp: 26941
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | corecount: 12
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | event service: False
[2025-04-18 17:07:00] 2025-04-18 21:06:40,483 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 5004: 2453263, 5005: 2462204, 5009: 2462260, 5015: 2462558}
[2025-04-18 17:07:00] 2025-04-18 21:06:40,484 | INFO     | --------------------------------------------------
[2025-04-18 17:07:00] 2025-04-18 21:06:40,484 | INFO     | 
[2025-04-18 17:07:00] 2025-04-18 21:06:40,484 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 17:07:00] 2025-04-18 21:06:40,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 17:07:00] 2025-04-18 21:06:40,513 | INFO     | job 6606654468 has completed (purged errors)
[2025-04-18 17:07:00] 2025-04-18 21:06:40,513 | INFO     | overall cleanup function is called
[2025-04-18 17:07:00] 2025-04-18 21:06:41,521 | INFO     | --- collectZombieJob: --- 10, [26941]
[2025-04-18 17:07:00] 2025-04-18 21:06:41,521 | INFO     | zombie collector waiting for pid 26941
[2025-04-18 17:07:00] 2025-04-18 21:06:41,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 17:07:00] 2025-04-18 21:06:41,522 | INFO     | collected zombie processes
[2025-04-18 17:07:00] 2025-04-18 21:06:41,522 | INFO     | will attempt to kill all subprocesses of pid=26941
[2025-04-18 17:07:00] 2025-04-18 21:06:41,613 | INFO     | process IDs to be killed: [26941] (in reverse order)
[2025-04-18 17:07:00] 2025-04-18 21:06:41,665 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 17:07:00] 2025-04-18 21:06:41,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 17:07:00] 2025-04-18 21:06:41,669 | INFO     | did not find any defunct processes belonging to 26941
[2025-04-18 17:07:00] 2025-04-18 21:06:41,672 | INFO     | did not find any defunct processes belonging to 26941
[2025-04-18 17:07:00] 2025-04-18 21:06:41,672 | INFO     | ready for new job
[2025-04-18 17:07:00] 2025-04-18 21:06:41,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 17:07:00] 2025-04-18 21:06:41,673 | INFO     | **************************************
[2025-04-18 17:07:00] 2025-04-18 21:06:41,673 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 17:07:00] 2025-04-18 21:06:41,673 | INFO     | **************************************
[2025-04-18 17:07:00] 2025-04-18 21:06:41,673 | INFO     | 
[2025-04-18 17:07:00] 2025-04-18 21:06:41,674 | INFO     | architecture information:
[2025-04-18 17:07:00] 2025-04-18 21:06:41,674 | INFO     | executing command: cat /etc/os-release
[2025-04-18 17:07:00] 2025-04-18 21:06:41,688 | INFO     | cat /etc/os-release:
[2025-04-18 17:07:00] NAME="CentOS Linux"
[2025-04-18 17:07:00] VERSION="7 (Core)"
[2025-04-18 17:07:00] ID="centos"
[2025-04-18 17:07:00] ID_LIKE="rhel fedora"
[2025-04-18 17:07:00] VERSION_ID="7"
[2025-04-18 17:07:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 17:07:00] ANSI_COLOR="0;31"
[2025-04-18 17:07:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 17:07:00] HOME_URL="https://www.centos.org/"
[2025-04-18 17:07:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 17:07:00] 
[2025-04-18 17:07:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 17:07:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 17:07:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 17:07:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 17:07:00] 
[2025-04-18 17:07:00] 2025-04-18 21:06:41,688 | INFO     | **************************************
[2025-04-18 17:07:00] 2025-04-18 21:06:41,918 | INFO     | PID=20506 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 17:07:00] 2025-04-18 21:06:42,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 17:07:00] 2025-04-18 21:06:42,206 | INFO     | sufficient remaining disk space (29401022464 B)
[2025-04-18 17:07:00] 2025-04-18 21:06:42,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 17:07:00] 2025-04-18 21:06:42,207 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 17:07:00] 2025-04-18 21:06:42,207 | INFO     | update_server=False
[2025-04-18 17:07:00] 2025-04-18 21:06:42,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 17:07:00] 2025-04-18 21:06:42,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:07:00] 2025-04-18 21:06:42,208 | INFO     | aborting loop
[2025-04-18 17:07:00] 2025-04-18 21:06:42,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:07:00] 2025-04-18 21:06:42,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 17:07:00] 2025-04-18 21:06:42,209 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 17:07:00] 2025-04-18 21:06:42,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 17:07:00] 2025-04-18 21:06:42,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 17:07:00] 2025-04-18 21:06:42,715 | INFO     | all payload control threads have been joined
[2025-04-18 17:07:00] 2025-04-18 21:06:42,839 | INFO     | all data control threads have been joined
[2025-04-18 17:07:00] 2025-04-18 21:06:43,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 17:07:00] 2025-04-18 21:06:43,212 | INFO     | [job] retrieve thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,213 | INFO     | [job] job monitor thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,214 | INFO     | [job] queue monitor thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,308 | INFO     | all job control threads have been joined
[2025-04-18 17:07:00] 2025-04-18 21:06:43,541 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,545 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,621 | INFO     | [data] copytool_in thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,720 | INFO     | [payload] control thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:43,843 | INFO     | [data] control thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:44,077 | INFO     | [payload] validate_post thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:44,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 17:07:00] 2025-04-18 21:06:44,309 | INFO     | [job] control thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:44,571 | INFO     | [job] validate thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:44,595 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:44,657 | INFO     | [payload] failed_post thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:45,209 | INFO     | [data] copytool_out thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:48,181 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:53,019 | INFO     | job.realtimelogging is not enabled
[2025-04-18 17:07:00] 2025-04-18 21:06:54,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 17:07:00] 2025-04-18 21:06:55,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829668955968)>', '<ExcThread(monitor, started 139829102769920)>']
[2025-04-18 17:07:00] 2025-04-18 21:06:56,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 17:07:00] 2025-04-18 21:06:56,276 | INFO     | [monitor] control thread has ended
[2025-04-18 17:07:00] 2025-04-18 21:07:00,550 | INFO     | all workflow threads have been joined
[2025-04-18 17:07:00] 2025-04-18 21:07:00,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 17:07:00] 2025-04-18 21:07:00,550 | INFO     | traces error code: 0
[2025-04-18 17:07:00] 2025-04-18 21:07:00,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 17:07:00] 2025-04-18 21:07:00,637 [wrapper] ==== pilot stdout END ====
[2025-04-18 17:07:00] 2025-04-18 21:07:00,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 17:07:00] 2025-04-18 21:07:00,644 [wrapper] pilotpid: 20506
[2025-04-18 17:07:00] 2025-04-18 21:07:00,648 [wrapper] Pilot exit status: 0
[2025-04-18 17:07:00] 2025-04-18 21:07:00,663 [wrapper] pandaids: 6606654468
[2025-04-18 17:07:00] 2025-04-18 21:07:00,705 [wrapper] cleanup supervisor_pilot 19387 20507
[2025-04-18 17:07:00] 2025-04-18 21:07:00,708 [wrapper] Test setup, not cleaning
[2025-04-18 17:07:00] 2025-04-18 21:07:00,712 [wrapper] apfmon messages muted
[2025-04-18 17:07:00] 2025-04-18 21:07:00,715 [wrapper] ==== wrapper stdout END ====
[2025-04-18 17:07:00] 2025-04-18 21:07:00,719 [wrapper] ==== wrapper stderr END ====
[2025-04-18 17:07:00]  *** Error codes and diagnostics ***
[2025-04-18 17:07:00]     "exeErrorCode": 0,
[2025-04-18 17:07:00]     "exeErrorDiag": "",
[2025-04-18 17:07:00]     "pilotErrorCode": 0,
[2025-04-18 17:07:00]     "pilotErrorDiag": "",
[2025-04-18 17:07:00]  *** Listing of results directory ***
[2025-04-18 17:07:00] total 412008
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 12:42 queuedata.json
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 12:42 pilot3.tar.gz
[2025-04-18 17:07:00] -rwx------ 1 boincer umatlas     37140 Apr 18 12:43 runpilot2-wrapper.sh
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas       100 Apr 18 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 17:07:00] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 15:42 run_atlas
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas       105 Apr 18 15:42 job.xml
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas 222211492 Apr 18 15:42 EVNT.44075481._002783.pool.root.1
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:42 start_atlas.sh
[2025-04-18 17:07:00] drwxrwx--x 2 boincer umatlas      4096 Apr 18 15:42 shared
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 15:42 input.tar.gz
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas         0 Apr 18 15:42 boinc_lockfile
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 15:42 pandaJob.out
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas       424 Apr 18 15:42 setup.sh.local
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas    991292 Apr 18 15:42 agis_schedconf.cvmfs.json
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas   1618536 Apr 18 15:42 agis_ddmendpoints.agis.ALL.json
[2025-04-18 17:07:00] drwx------ 4 boincer umatlas      4096 Apr 18 15:42 pilot3
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 17:03 init_data.xml
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas        95 Apr 18 17:05 pilot_heartbeat.json
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas 194144542 Apr 18 17:05 HITS.44075483._071642.pool.root.1
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas       530 Apr 18 17:06 boinc_task_state.xml
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas      1048 Apr 18 17:06 memory_monitor_summary.json
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas    363037 Apr 18 17:06 log.44075483._071642.job.log.tgz.1
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 17:06 boinc_mmap_file
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas        27 Apr 18 17:06 wrapper_checkpoint.txt
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas      7754 Apr 18 17:06 heartbeat.json
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas      4865 Apr 18 17:07 pilotlog.txt
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas    477310 Apr 18 17:07 log.44075483._071642.job.log.1
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas       357 Apr 18 17:07 output.list
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas       620 Apr 18 17:07 runtime_log
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas    860160 Apr 18 17:07 result.tar.gz
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas       658 Apr 18 17:07 Z1KLDm4y3P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMjfLDm73qFYo.diag
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 17:07 runtime_log.err
[2025-04-18 17:07:00] -rw-r--r-- 1 boincer umatlas     21830 Apr 18 17:07 stderr.txt
[2025-04-18 17:07:00] HITS file was successfully produced:
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas 194144542 Apr 18 17:05 shared/HITS.pool.root.1
[2025-04-18 17:07:00]  *** Contents of shared directory: ***
[2025-04-18 17:07:00] total 407960
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas 222211492 Apr 18 15:42 ATLAS.root_0
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:42 start_atlas.sh
[2025-04-18 17:07:00] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 15:42 input.tar.gz
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas 194144542 Apr 18 17:05 HITS.pool.root.1
[2025-04-18 17:07:00] -rw------- 1 boincer umatlas    860160 Apr 18 17:07 result.tar.gz
17:07:02 (16891): run_atlas exited; CPU time 46095.567043
17:07:02 (16891): called boinc_finish(0)

</stderr_txt>
]]>

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