Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:28:09 (605939): wrapper (7.7.26015): starting
08:28:09 (605939): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 08:28:09] Arguments: --nthreads 3
[2025-04-19 08:28:09] Threads: 3
[2025-04-19 08:28:09] Checking for CVMFS
[2025-04-19 08:28:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:28:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:28:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:28:09] 2.9.2.0 3594848 4158 86728 145029 2 56 26224584 36864001 0 130560 0 3045057 99.991 1019319 15880 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 08:28:09] CVMFS is ok
[2025-04-19 08:28:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:28:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 08:28:09] Further information can be found at the LHC@home message board.
[2025-04-19 08:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:28:09] Checking for apptainer binary...
[2025-04-19 08:28:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 08:28:09] Running /usr/bin/apptainer --version
[2025-04-19 08:28:09] apptainer version 1.3.6-4.2
[2025-04-19 08:28:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:28:09] thA323
[2025-04-19 08:28:09] apptainer works
[2025-04-19 08:28:09] Set ATHENA_PROC_NUMBER=3
[2025-04-19 08:28:09] Set ATHENA_CORE_NUMBER=3
[2025-04-19 08:28:09] Starting ATLAS job with PandaID=6606652495
[2025-04-19 08:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:59:23]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:59:23]  filesize=221582
[2025-04-19 09:59:23]  filetype=log
[2025-04-19 09:59:23]  guid=e363fe67-bab8-4259-bbcc-d36957ffc7d8
[2025-04-19 09:59:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 09:59:23]  is_altstaged=None
[2025-04-19 09:59:23]  is_tar=False
[2025-04-19 09:59:23]  lfn=log.44075483._071309.job.log.tgz.1
[2025-04-19 09:59:23]  mtime=0
[2025-04-19 09:59:23]  protocol_id=None
[2025-04-19 09:59:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:59:23]  replicas=None
[2025-04-19 09:59:23]  scope=mc23_13p6TeV
[2025-04-19 09:59:23]  status=None
[2025-04-19 09:59:23]  status_code=0
[2025-04-19 09:59:23]  storage_token=
[2025-04-19 09:59:23]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606652495/log.44075483._071309.job.log.tgz.1
[2025-04-19 09:59:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/98/log.44075483._071309.job.log.tgz.1
[2025-04-19 09:59:23]  workdir=None
[2025-04-19 09:59:23] ]
[2025-04-19 09:59:23] 2025-04-19 07:58:37,809 | INFO     | transferring file log.44075483._071309.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606652495/log.44075483._071309.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 09:59:23] 2025-04-19 07:58:37,809 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606652495/log.44075483._071309.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0713
[2025-04-19 09:59:23] 2025-04-19 07:58:37,824 | INFO     | adding to output.list: log.44075483._071309.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/98/log.44075483._071309.job.log.tg
[2025-04-19 09:59:23] 2025-04-19 07:58:37,824 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:59:23] 2025-04-19 07:58:37,824 | INFO     | summary of transferred files:
[2025-04-19 09:59:23] 2025-04-19 07:58:37,824 | INFO     |  -- lfn=log.44075483._071309.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:59:23] 2025-04-19 07:58:37,824 | INFO     | stage-out finished correctly
[2025-04-19 09:59:23] 2025-04-19 07:58:38,600 | INFO     | monitor loop #416: job 0:6606652495 is in state 'finished'
[2025-04-19 09:59:23] 2025-04-19 07:58:38,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:59:23] 2025-04-19 07:58:39,196 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:59:23] 2025-04-19 07:58:40,827 | INFO     | job 6606652495 has state=finished
[2025-04-19 09:59:23] 2025-04-19 07:58:40,827 | INFO     | preparing for final server update for job 6606652495 in state='finished'
[2025-04-19 09:59:23] 2025-04-19 07:58:40,828 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:59:23] 2025-04-19 07:58:40,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:59:23] 2025-04-19 07:58:40,828 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:59:23] 2025-04-19 07:58:40,828 | INFO     | job 6606652495 has finished - writing final server update
[2025-04-19 09:59:23] 2025-04-19 07:58:40,828 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:59:23] 2025-04-19 07:58:40,829 | INFO     | executing command: lscpu
[2025-04-19 09:59:23] 2025-04-19 07:58:40,847 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:59:23] 2025-04-19 07:58:41,104 | INFO     | monitor loop #417: job 0:6606652495 is in state 'finished'
[2025-04-19 09:59:23] 2025-04-19 07:58:41,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606652495/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | INFO     | extracted standard info from prmon json
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:59:23] 2025-04-19 07:58:43,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:59:23] 2025-04-19 07:58:43,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:59:23] 2025-04-19 07:58:43,364 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:59:23] 2025-04-19 07:58:43,364 | INFO     | sum of square deviations: 170944600.5
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | sum of deviations: -3782903745.499996
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | mean x: 1745046890.5
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | mean y: 2508772.1341463416
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | -- intersect: 38619372942.38076
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | intersect: 38619372942.38076
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | chi2: 1.3813091018756496
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | -- intersect: 38619372942.38076
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | current memory leak: -22.13 B/s (using 82 data points, chi2=1.38)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | ..............................
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . Timing measurements:
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . get job = 0 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . initial setup = 1 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . payload setup = 3 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . stage-in = 0 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . payload execution = 5400 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . stage-out = 0 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,365 | INFO     | . log creation = 0 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,366 | INFO     | ..............................
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | 
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | job summary report
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | --------------------------------------------------
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | PanDA job id: 6606652495
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | task id: 44075483
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | errors: (none)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | pilot state: finished 
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | transexitcode: 0
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | exeerrorcode: 0
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | exeerrordiag: 
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | exitcode: 0
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | exitmsg: OK
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | cpuconsumptiontime: 14340 s
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | nevents: 400
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | neventsw: 0
[2025-04-19 09:59:23] 2025-04-19 07:58:43,397 | INFO     | pid: 616032
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | pgrp: 616032
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | corecount: 3
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | event service: False
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | sizes: {0: 2426825, 3: 2427031, 11: 2427059, 5408: 2453634, 5409: 2462581, 5411: 2462637, 5415: 2462935}
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | --------------------------------------------------
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | 
[2025-04-19 09:59:23] 2025-04-19 07:58:43,398 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | job 6606652495 has completed (purged errors)
[2025-04-19 09:59:23] 2025-04-19 07:58:43,412 | INFO     | overall cleanup function is called
[2025-04-19 09:59:23] 2025-04-19 07:58:44,419 | INFO     | --- collectZombieJob: --- 10, [616032]
[2025-04-19 09:59:23] 2025-04-19 07:58:44,419 | INFO     | zombie collector waiting for pid 616032
[2025-04-19 09:59:23] 2025-04-19 07:58:44,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:59:23] 2025-04-19 07:58:44,419 | INFO     | collected zombie processes
[2025-04-19 09:59:23] 2025-04-19 07:58:44,419 | INFO     | will attempt to kill all subprocesses of pid=616032
[2025-04-19 09:59:23] 2025-04-19 07:58:44,480 | INFO     | process IDs to be killed: [616032] (in reverse order)
[2025-04-19 09:59:23] 2025-04-19 07:58:44,510 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:59:23] 2025-04-19 07:58:44,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:59:23] 2025-04-19 07:58:44,512 | INFO     | did not find any defunct processes belonging to 616032
[2025-04-19 09:59:23] 2025-04-19 07:58:44,514 | INFO     | did not find any defunct processes belonging to 616032
[2025-04-19 09:59:23] 2025-04-19 07:58:44,514 | INFO     | ready for new job
[2025-04-19 09:59:23] 2025-04-19 07:58:44,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | **************************************
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | **************************************
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | 
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | architecture information:
[2025-04-19 09:59:23] 2025-04-19 07:58:44,515 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:59:23] 2025-04-19 07:58:44,525 | INFO     | cat /etc/os-release:
[2025-04-19 09:59:23] NAME="CentOS Linux"
[2025-04-19 09:59:23] VERSION="7 (Core)"
[2025-04-19 09:59:23] ID="centos"
[2025-04-19 09:59:23] ID_LIKE="rhel fedora"
[2025-04-19 09:59:23] VERSION_ID="7"
[2025-04-19 09:59:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:59:23] ANSI_COLOR="0;31"
[2025-04-19 09:59:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:59:23] HOME_URL="https://www.centos.org/"
[2025-04-19 09:59:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:59:23] 
[2025-04-19 09:59:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:59:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:59:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:59:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:59:23] 
[2025-04-19 09:59:23] 2025-04-19 07:58:44,526 | INFO     | **************************************
[2025-04-19 09:59:23] 2025-04-19 07:58:45,028 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 09:59:23] 2025-04-19 07:58:45,041 | INFO     | sufficient remaining disk space (273794727936 B)
[2025-04-19 09:59:23] 2025-04-19 07:58:45,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:59:23] 2025-04-19 07:58:45,041 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:59:23] 2025-04-19 07:58:45,042 | INFO     | update_server=False
[2025-04-19 09:59:23] 2025-04-19 07:58:45,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:59:23] 2025-04-19 07:58:45,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:59:23] 2025-04-19 07:58:45,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:59:23] 2025-04-19 07:58:45,042 | INFO     | aborting loop
[2025-04-19 09:59:23] 2025-04-19 07:58:45,077 | INFO     | all job control threads have been joined
[2025-04-19 09:59:23] 2025-04-19 07:58:45,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:59:23] 2025-04-19 07:58:45,352 | INFO     | all payload control threads have been joined
[2025-04-19 09:59:23] 2025-04-19 07:58:45,550 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:59:23] 2025-04-19 07:58:45,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:59:23] 2025-04-19 07:58:45,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:59:23] 2025-04-19 07:58:45,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:59:23] 2025-04-19 07:58:45,878 | INFO     | all data control threads have been joined
[2025-04-19 09:59:23] 2025-04-19 07:58:46,047 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,047 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,047 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,082 | INFO     | [job] control thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,183 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,356 | INFO     | [payload] control thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,817 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,829 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:46,882 | INFO     | [data] control thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:47,087 | INFO     | [job] validate thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:47,136 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:47,191 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:47,513 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:47,876 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:49,242 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:55,734 | INFO     | job.realtimelogging is not enabled
[2025-04-19 09:59:23] 2025-04-19 07:58:56,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:59:23] 2025-04-19 07:58:57,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692408338240)>', '<ExcThread(monitor, started 139691747677952)>']
[2025-04-19 09:59:23] 2025-04-19 07:58:57,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:59:23] 2025-04-19 07:58:57,604 | INFO     | [monitor] control thread has ended
[2025-04-19 09:59:23] 2025-04-19 07:59:02,082 | INFO     | all workflow threads have been joined
[2025-04-19 09:59:23] 2025-04-19 07:59:02,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:59:23] 2025-04-19 07:59:02,083 | INFO     | traces error code: 0
[2025-04-19 09:59:23] 2025-04-19 07:59:02,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:59:23] 2025-04-19 07:59:02,134 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:59:23] 2025-04-19 07:59:02,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:59:23] 2025-04-19 07:59:02,139 [wrapper] pilotpid: 609592
[2025-04-19 09:59:23] 2025-04-19 07:59:02,141 [wrapper] Pilot exit status: 0
[2025-04-19 09:59:23] 2025-04-19 07:59:02,149 [wrapper] pandaids: 6606652495
[2025-04-19 09:59:23] 2025-04-19 07:59:02,169 [wrapper] cleanup supervisor_pilot  628957 609593
[2025-04-19 09:59:23] 2025-04-19 07:59:02,172 [wrapper] Test setup, not cleaning
[2025-04-19 09:59:23] 2025-04-19 07:59:02,174 [wrapper] apfmon messages muted
[2025-04-19 09:59:23] 2025-04-19 07:59:02,177 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:59:23] 2025-04-19 07:59:02,179 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:59:23]  *** Error codes and diagnostics ***
[2025-04-19 09:59:23]     "exeErrorCode": 0,
[2025-04-19 09:59:23]     "exeErrorDiag": "",
[2025-04-19 09:59:23]     "pilotErrorCode": 0,
[2025-04-19 09:59:23]     "pilotErrorDiag": "",
[2025-04-19 09:59:23]  *** Listing of results directory ***
[2025-04-19 09:59:23] total 410180
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc    495897 Apr 18 17:45 pilot3.tar.gz
[2025-04-19 09:59:23] -rwx------ 1 boinc boinc     37140 Apr 18 18:14 runpilot2-wrapper.sh
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc      5111 Apr 18 18:14 queuedata.json
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc       100 Apr 19 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:59:23] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 08:28 run_atlas
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc       105 Apr 19 08:28 job.xml
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc 220517699 Apr 19 08:28 EVNT.44075481._002770.pool.root.1
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc      6929 Apr 19 08:28 init_data.xml
[2025-04-19 09:59:23] drwxrwx--x 2 boinc boinc      4096 Apr 19 08:28 shared
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc    508892 Apr 19 08:28 input.tar.gz
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:28 start_atlas.sh
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc         0 Apr 19 08:28 boinc_lockfile
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc      2578 Apr 19 08:28 pandaJob.out
[2025-04-19 09:59:23] -rw------- 1 boinc boinc       424 Apr 19 08:28 setup.sh.local
[2025-04-19 09:59:23] -rw------- 1 boinc boinc    991292 Apr 19 08:28 agis_schedconf.cvmfs.json
[2025-04-19 09:59:23] -rw------- 1 boinc boinc   1618536 Apr 19 08:28 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:59:23] drwx------ 4 boinc boinc      4096 Apr 19 08:28 pilot3
[2025-04-19 09:59:23] -rw------- 1 boinc boinc        95 Apr 19 09:57 pilot_heartbeat.json
[2025-04-19 09:59:23] -rw------- 1 boinc boinc 194140067 Apr 19 09:58 HITS.44075483._071309.pool.root.1
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc       530 Apr 19 09:58 boinc_task_state.xml
[2025-04-19 09:59:23] -rw------- 1 boinc boinc      1031 Apr 19 09:58 memory_monitor_summary.json
[2025-04-19 09:59:23] -rw------- 1 boinc boinc    221582 Apr 19 09:58 log.44075483._071309.job.log.tgz.1
[2025-04-19 09:59:23] -rw------- 1 boinc boinc      7671 Apr 19 09:58 heartbeat.json
[2025-04-19 09:59:23] -rw------- 1 boinc boinc      4429 Apr 19 09:59 pilotlog.txt
[2025-04-19 09:59:23] -rw------- 1 boinc boinc    522782 Apr 19 09:59 log.44075483._071309.job.log.1
[2025-04-19 09:59:23] -rw------- 1 boinc boinc       357 Apr 19 09:59 output.list
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc       620 Apr 19 09:59 runtime_log
[2025-04-19 09:59:23] -rw------- 1 boinc boinc    768000 Apr 19 09:59 result.tar.gz
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc     11099 Apr 19 09:59 runtime_log.err
[2025-04-19 09:59:23] -rw------- 1 boinc boinc       663 Apr 19 09:59 6OIKDmqX3P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpJ5KDm4qRkzm.diag
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc      8192 Apr 19 09:59 boinc_mmap_file
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc     21073 Apr 19 09:59 stderr.txt
[2025-04-19 09:59:23] -rw-r--r-- 1 boinc boinc        27 Apr 19 09:59 wrapper_checkpoint.txt
[2025-04-19 09:59:23] HITS file was successfully produced:
[2025-04-19 09:59:23] -rw------- 1 boinc boinc 194140067 Apr 19 09:58 shared/HITS.pool.root.1
[2025-04-19 09:59:23]  *** Contents of shared directory: ***
[2025-04-19 09:59:23] total 406224
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc 220517699 Apr 19 08:28 ATLAS.root_0
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc    508892 Apr 19 08:28 input.tar.gz
[2025-04-19 09:59:23] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:28 start_atlas.sh
[2025-04-19 09:59:23] -rw------- 1 boinc boinc 194140067 Apr 19 09:58 HITS.pool.root.1
[2025-04-19 09:59:23] -rw------- 1 boinc boinc    768000 Apr 19 09:59 result.tar.gz
09:59:25 (605939): run_atlas exited; CPU time 14368.291138
09:59:25 (605939): called boinc_finish(0)

</stderr_txt>
]]>

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