Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:19:44 (48381): wrapper (7.7.26015): starting
15:19:44 (48381): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 15:19:44] Arguments: --nthreads 8
[2025-04-18 15:19:44] Threads: 8
[2025-04-18 15:19:44] Checking for CVMFS
[2025-04-18 15:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 15:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 15:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 15:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 15:19:45] 2.11.2.0 26550 24253 97652 145013 1 335 17373052 18432001 11923 130560 0 51940644 98.408 170087983 37444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 15:19:45] CVMFS is ok
[2025-04-18 15:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 15:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 15:19:45] Further information can be found at the LHC@home message board.
[2025-04-18 15:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 15:19:45] Checking for apptainer binary...
[2025-04-18 15:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 15:19:45] Running /usr/bin/apptainer --version
[2025-04-18 15:19:45] apptainer version 1.3.2-1.el7
[2025-04-18 15:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 15:19:46] c-211-8.aglt2.org
[2025-04-18 15:19:46] apptainer works
[2025-04-18 15:19:46] Set ATHENA_PROC_NUMBER=8
[2025-04-18 15:19:46] Set ATHENA_CORE_NUMBER=8
[2025-04-18 15:19:46] Starting ATLAS job with PandaID=6606652406
[2025-04-18 15:19:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:40:05 (48381): BOINC client no longer exists - exiting
22:40:05 (48381): timer handler: client dead, exiting
22:47:27 (10897): wrapper (7.7.26015): starting
22:47:27 (10897): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 22:47:27] Arguments: --nthreads 8
[2025-04-18 22:47:27] Threads: 8
[2025-04-18 22:47:27] This job has been restarted, cleaning up previous attempt
[2025-04-18 22:47:27] Checking for CVMFS
[2025-04-18 22:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:47:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:47:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:47:30] 2.11.2.0 26550 24700 117004 145023 2 182 17615961 18432000 10342 130560 0 52766792 98.387 173463323 37376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 22:47:30] CVMFS is ok
[2025-04-18 22:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:47:30] Further information can be found at the LHC@home message board.
[2025-04-18 22:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:47:30] Checking for apptainer binary...
[2025-04-18 22:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:47:30] Running /usr/bin/apptainer --version
[2025-04-18 22:47:31] apptainer version 1.3.2-1.el7
[2025-04-18 22:47:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:47:33] c-211-8.aglt2.org
[2025-04-18 22:47:33] apptainer works
[2025-04-18 22:47:34] Set ATHENA_PROC_NUMBER=8
[2025-04-18 22:47:34] Set ATHENA_CORE_NUMBER=8
[2025-04-18 22:47:34] Starting ATLAS job with PandaID=6606652406
[2025-04-18 22:47:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:46:14]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:46:14] 2025-04-19 10:45:59,690 | INFO     | sum of deviations: 355024003954.9703
[2025-04-19 06:46:14] 2025-04-19 10:45:59,691 | INFO     | mean x: 1745045212.9808512
[2025-04-19 06:46:14] 2025-04-19 10:45:59,691 | INFO     | mean y: 2426889.7744680853
[2025-04-19 06:46:14] 2025-04-19 10:45:59,691 | INFO     | -- intersect: -19241487835.661827
[2025-04-19 06:46:14] 2025-04-19 10:45:59,691 | INFO     | intersect: -19241487835.661827
[2025-04-19 06:46:14] 2025-04-19 10:45:59,692 | INFO     | chi2: 7.076873510709435
[2025-04-19 06:46:14] 2025-04-19 10:45:59,693 | INFO     | sum of square deviations: 31177207324.159176
[2025-04-19 06:46:14] 2025-04-19 10:45:59,698 | INFO     | sum of deviations: 382821901050.3437
[2025-04-19 06:46:14] 2025-04-19 10:45:59,699 | INFO     | mean x: 1745045060.4860215
[2025-04-19 06:46:14] 2025-04-19 10:45:59,699 | INFO     | mean y: 2431018.5913978494
[2025-04-19 06:46:14] 2025-04-19 10:45:59,699 | INFO     | -- intersect: -21424807814.185852
[2025-04-19 06:46:14] 2025-04-19 10:45:59,699 | INFO     | intersect: -21424807814.185852
[2025-04-19 06:46:14] 2025-04-19 10:45:59,700 | INFO     | chi2: 6.270847281869516
[2025-04-19 06:46:14] 2025-04-19 10:45:59,700 | INFO     | current chi2=6.270847281869516 (change=11.389580831424484 %)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,700 | INFO     | right removable region: 464
[2025-04-19 06:46:14] 2025-04-19 10:45:59,701 | INFO     | sum of square deviations: 31177069464.159172
[2025-04-19 06:46:14] 2025-04-19 10:45:59,707 | INFO     | sum of deviations: 223591354087.83908
[2025-04-19 06:46:14] 2025-04-19 10:45:59,707 | INFO     | mean x: 1745045365.4860215
[2025-04-19 06:46:14] 2025-04-19 10:45:59,708 | INFO     | mean y: 2446586.129032258
[2025-04-19 06:46:14] 2025-04-19 10:45:59,708 | INFO     | -- intersect: -12512426136.667156
[2025-04-19 06:46:14] 2025-04-19 10:45:59,708 | INFO     | intersect: -12512426136.667156
[2025-04-19 06:46:14] 2025-04-19 10:45:59,709 | INFO     | chi2: 3.9833589548364765
[2025-04-19 06:46:14] 2025-04-19 10:45:59,709 | INFO     | current chi2=3.9833589548364765 (change=43.71301184331671 %)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,710 | INFO     | sum of square deviations: 30182060947.965485
[2025-04-19 06:46:14] 2025-04-19 10:45:59,715 | INFO     | sum of deviations: 125128549518.97406
[2025-04-19 06:46:14] 2025-04-19 10:45:59,716 | INFO     | mean x: 1745045517.9913044
[2025-04-19 06:46:14] 2025-04-19 10:45:59,716 | INFO     | mean y: 2461677.743478261
[2025-04-19 06:46:14] 2025-04-19 10:45:59,716 | INFO     | -- intersect: -7232134226.336346
[2025-04-19 06:46:14] 2025-04-19 10:45:59,716 | INFO     | intersect: -7232134226.336346
[2025-04-19 06:46:14] 2025-04-19 10:45:59,717 | INFO     | chi2: 2.3689688345339053
[2025-04-19 06:46:14] 2025-04-19 10:45:59,717 | INFO     | current chi2=2.3689688345339053 (change=40.528361581434346 %)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,718 | INFO     | sum of square deviations: 29208448181.745087
[2025-04-19 06:46:14] 2025-04-19 10:45:59,723 | INFO     | sum of deviations: 39080980873.5934
[2025-04-19 06:46:14] 2025-04-19 10:45:59,724 | INFO     | mean x: 1745045670.4967034
[2025-04-19 06:46:14] 2025-04-19 10:45:59,724 | INFO     | mean y: 2475142.395604396
[2025-04-19 06:46:14] 2025-04-19 10:45:59,724 | INFO     | -- intersect: -2332400577.3919187
[2025-04-19 06:46:14] 2025-04-19 10:45:59,724 | INFO     | intersect: -2332400577.3919187
[2025-04-19 06:46:14] 2025-04-19 10:45:59,725 | INFO     | chi2: 1.083987504412614
[2025-04-19 06:46:14] 2025-04-19 10:45:59,725 | INFO     | current chi2=1.083987504412614 (change=54.24222182197308 %)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,726 | INFO     | sum of square deviations: 28255998602.997818
[2025-04-19 06:46:14] 2025-04-19 10:45:59,731 | INFO     | sum of deviations: 14483212584.044483
[2025-04-19 06:46:14] 2025-04-19 10:45:59,732 | INFO     | mean x: 1745045823.0022223
[2025-04-19 06:46:14] 2025-04-19 10:45:59,732 | INFO     | mean y: 2479073.9555555554
[2025-04-19 06:46:14] 2025-04-19 10:45:59,732 | INFO     | -- intersect: -891981248.560125
[2025-04-19 06:46:14] 2025-04-19 10:45:59,732 | INFO     | intersect: -891981248.560125
[2025-04-19 06:46:14] 2025-04-19 10:45:59,733 | INFO     | chi2: 0.979048653410685
[2025-04-19 06:46:14] 2025-04-19 10:45:59,733 | INFO     | current chi2=0.979048653410685 (change=9.680817405620619 %)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,733 | INFO     | left removable region: 40
[2025-04-19 06:46:14] 2025-04-19 10:45:59,734 | INFO     | sum of square deviations: 23635847823.96224
[2025-04-19 06:46:14] 2025-04-19 10:45:59,739 | INFO     | sum of deviations: 3033308411.2358494
[2025-04-19 06:46:14] 2025-04-19 10:45:59,739 | INFO     | mean x: 1745046250.009434
[2025-04-19 06:46:14] 2025-04-19 10:45:59,739 | INFO     | mean y: 2491024.191037736
[2025-04-19 06:46:14] 2025-04-19 10:45:59,740 | INFO     | -- intersect: -221459625.1604458
[2025-04-19 06:46:14] 2025-04-19 10:45:59,740 | INFO     | intersect: -221459625.1604458
[2025-04-19 06:46:14] 2025-04-19 10:45:59,740 | INFO     | chi2: 0.006061895933670341
[2025-04-19 06:46:14] 2025-04-19 10:45:59,744 | INFO     | -- intersect: -221459625.1604458
[2025-04-19 06:46:14] 2025-04-19 10:45:59,744 | INFO     | current memory leak: 0.13 B/s (using 424 data points, chi2=0.01)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,745 | INFO     | ..............................
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . Timing measurements:
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . get job = 0 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . initial setup = 3 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . payload setup = 8 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . stage-in = 0 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . payload execution = 28641 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,746 | INFO     | . stage-out = 3 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,747 | INFO     | . log creation = 0 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,747 | INFO     | ..............................
[2025-04-19 06:46:14] 2025-04-19 10:45:59,919 | INFO     | 
[2025-04-19 06:46:14] 2025-04-19 10:45:59,919 | INFO     | job summary report
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | --------------------------------------------------
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | PanDA job id: 6606652406
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | task id: 44075483
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | errors: (none)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | pilot state: finished 
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | transexitcode: 0
[2025-04-19 06:46:14] 2025-04-19 10:45:59,920 | INFO     | exeerrorcode: 0
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | exeerrordiag: 
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | exitcode: 0
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | exitmsg: OK
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | cpuconsumptiontime: 57398 s
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | nevents: 400
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | neventsw: 0
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | pid: 45949
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | pgrp: 45949
[2025-04-19 06:46:14] 2025-04-19 10:45:59,921 | INFO     | corecount: 8
[2025-04-19 06:46:14] 2025-04-19 10:45:59,922 | INFO     | event service: False
[2025-04-19 06:46:14] 2025-04-19 10:45:59,922 | INFO     | sizes: {0: 2426652, 1: 2426851, 7: 2427057, 12: 2427085, 28653: 2463627, 28658: 2472568, 28661: 2472752, 28672: 2472922}
[2025-04-19 06:46:14] 2025-04-19 10:45:59,922 | INFO     | --------------------------------------------------
[2025-04-19 06:46:14] 2025-04-19 10:45:59,922 | INFO     | 
[2025-04-19 06:46:14] 2025-04-19 10:45:59,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 06:46:14] 2025-04-19 10:45:59,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,958 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:46:14] 2025-04-19 10:45:59,960 | INFO     | job 6606652406 has completed (purged errors)
[2025-04-19 06:46:14] 2025-04-19 10:45:59,961 | INFO     | overall cleanup function is called
[2025-04-19 06:46:14] 2025-04-19 10:46:00,975 | INFO     | --- collectZombieJob: --- 10, [45949]
[2025-04-19 06:46:14] 2025-04-19 10:46:00,975 | INFO     | zombie collector waiting for pid 45949
[2025-04-19 06:46:14] 2025-04-19 10:46:00,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:46:14] 2025-04-19 10:46:00,975 | INFO     | collected zombie processes
[2025-04-19 06:46:14] 2025-04-19 10:46:00,975 | INFO     | will attempt to kill all subprocesses of pid=45949
[2025-04-19 06:46:14] 2025-04-19 10:46:01,309 | INFO     | process IDs to be killed: [45949] (in reverse order)
[2025-04-19 06:46:14] 2025-04-19 10:46:01,411 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:46:14] 2025-04-19 10:46:01,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:46:14] 2025-04-19 10:46:01,422 | INFO     | did not find any defunct processes belonging to 45949
[2025-04-19 06:46:14] 2025-04-19 10:46:01,431 | INFO     | did not find any defunct processes belonging to 45949
[2025-04-19 06:46:14] 2025-04-19 10:46:01,432 | INFO     | ready for new job
[2025-04-19 06:46:14] 2025-04-19 10:46:01,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:46:14] 2025-04-19 10:46:01,435 | INFO     | **************************************
[2025-04-19 06:46:14] 2025-04-19 10:46:01,435 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:46:14] 2025-04-19 10:46:01,435 | INFO     | **************************************
[2025-04-19 06:46:14] 2025-04-19 10:46:01,435 | INFO     | 
[2025-04-19 06:46:14] 2025-04-19 10:46:01,439 | INFO     | architecture information:
[2025-04-19 06:46:14] 2025-04-19 10:46:01,440 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:46:14] 2025-04-19 10:46:01,464 | INFO     | cat /etc/os-release:
[2025-04-19 06:46:14] NAME="CentOS Linux"
[2025-04-19 06:46:14] VERSION="7 (Core)"
[2025-04-19 06:46:14] ID="centos"
[2025-04-19 06:46:14] ID_LIKE="rhel fedora"
[2025-04-19 06:46:14] VERSION_ID="7"
[2025-04-19 06:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:46:14] ANSI_COLOR="0;31"
[2025-04-19 06:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:46:14] HOME_URL="https://www.centos.org/"
[2025-04-19 06:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:46:14] 
[2025-04-19 06:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:46:14] 
[2025-04-19 06:46:14] 2025-04-19 10:46:01,464 | INFO     | **************************************
[2025-04-19 06:46:14] 2025-04-19 10:46:01,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:46:14] 2025-04-19 10:46:02,038 | INFO     | sufficient remaining disk space (56295948288 B)
[2025-04-19 06:46:14] 2025-04-19 10:46:02,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:46:14] 2025-04-19 10:46:02,039 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:46:14] 2025-04-19 10:46:02,039 | INFO     | update_server=False
[2025-04-19 06:46:14] 2025-04-19 10:46:02,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:46:14] 2025-04-19 10:46:02,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:46:14] 2025-04-19 10:46:02,040 | INFO     | aborting loop
[2025-04-19 06:46:14] 2025-04-19 10:46:02,040 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:46:14] 2025-04-19 10:46:02,041 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:46:14] 2025-04-19 10:46:02,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:46:14] 2025-04-19 10:46:02,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:46:14] 2025-04-19 10:46:02,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:46:14] 2025-04-19 10:46:02,092 | INFO     | all payload control threads have been joined
[2025-04-19 06:46:14] 2025-04-19 10:46:02,996 | INFO     | all data control threads have been joined
[2025-04-19 06:46:14] 2025-04-19 10:46:03,045 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,045 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,088 | INFO     | [job] validate thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:46:14] 2025-04-19 10:46:03,097 | INFO     | [payload] control thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,442 | INFO     | all job control threads have been joined
[2025-04-19 06:46:14] 2025-04-19 10:46:03,669 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,768 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,797 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,815 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:03,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,002 | INFO     | [data] control thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,048 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,382 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,448 | INFO     | [job] control thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,467 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:04,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:46:14] 2025-04-19 10:46:05,939 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:07,098 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:46:14] 2025-04-19 10:46:07,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360569050944)>', '<ExcThread(monitor, started 140360135210752)>']
[2025-04-19 06:46:14] 2025-04-19 10:46:08,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:46:14] 2025-04-19 10:46:08,072 | INFO     | [monitor] control thread has ended
[2025-04-19 06:46:14] 2025-04-19 10:46:12,837 | INFO     | all workflow threads have been joined
[2025-04-19 06:46:14] 2025-04-19 10:46:12,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:46:14] 2025-04-19 10:46:12,838 | INFO     | traces error code: 0
[2025-04-19 06:46:14] 2025-04-19 10:46:12,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:46:14] 2025-04-19 10:46:13,026 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:46:14] 2025-04-19 10:46:13,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:46:14] 2025-04-19 10:46:13,038 [wrapper] pilotpid: 23917
[2025-04-19 06:46:14] 2025-04-19 10:46:13,041 [wrapper] Pilot exit status: 0
[2025-04-19 06:46:14] 2025-04-19 10:46:13,099 [wrapper] pandaids: 6606652406 6606652406
[2025-04-19 06:46:14] 2025-04-19 10:46:13,163 [wrapper] cleanup supervisor_pilot 13308 23918
[2025-04-19 06:46:14] 2025-04-19 10:46:13,168 [wrapper] Test setup, not cleaning
[2025-04-19 06:46:14] 2025-04-19 10:46:13,171 [wrapper] apfmon messages muted
[2025-04-19 06:46:14] 2025-04-19 10:46:13,174 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:46:14] 2025-04-19 10:46:13,178 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:46:14]  *** Error codes and diagnostics ***
[2025-04-19 06:46:14]     "exeErrorCode": 0,
[2025-04-19 06:46:14]     "exeErrorDiag": "",
[2025-04-19 06:46:14]     "pilotErrorCode": 0,
[2025-04-19 06:46:14]     "pilotErrorDiag": "",
[2025-04-19 06:46:14]  *** Listing of results directory ***
[2025-04-19 06:46:14] total 634128
[2025-04-19 06:46:14] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 11:45 pilot3.tar.gz
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 12:03 queuedata.json
[2025-04-19 06:46:14] -rwx------ 1 boincer umatlas     37140 Apr 18 12:04 runpilot2-wrapper.sh
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas       100 Apr 18 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:46:14] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 15:19 run_atlas
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas       105 Apr 18 15:19 job.xml
[2025-04-19 06:46:14] -rw-r--r-- 3 boincer umatlas 225090705 Apr 18 15:19 EVNT.44075481._002766.pool.root.1
[2025-04-19 06:46:14] -rw-r--r-- 3 boincer umatlas 225090705 Apr 18 15:19 ATLAS.root_0
[2025-04-19 06:46:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:19 start_atlas.sh
[2025-04-19 06:46:14] drwxrwx--x 2 boincer umatlas      4096 Apr 18 15:19 shared
[2025-04-19 06:46:14] -rw-r--r-- 2 boincer umatlas    508890 Apr 18 15:19 input.tar.gz
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas         0 Apr 18 15:19 boinc_lockfile
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 22:47 pandaJob.out
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas       467 Apr 18 22:47 setup.sh.local
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas    991292 Apr 18 22:47 agis_schedconf.cvmfs.json
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas      6134 Apr 19 06:36 init_data.xml
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas 189560207 Apr 19 06:44 HITS.44075483._071220.pool.root.1
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas       532 Apr 19 06:44 boinc_task_state.xml
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas        96 Apr 19 06:45 pilot_heartbeat.json
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas      1060 Apr 19 06:45 memory_monitor_summary.json
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas   1618536 Apr 19 06:45 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas    523820 Apr 19 06:45 log.44075483._071220.job.log.tgz.1
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas      7749 Apr 19 06:45 heartbeat.json
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas      4476 Apr 19 06:46 pilotlog.txt
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas   2348824 Apr 19 06:46 log.44075483._071220.job.log.1
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas       357 Apr 19 06:46 output.list
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas       620 Apr 19 06:46 runtime_log
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas   2887680 Apr 19 06:46 result.tar.gz
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas     11499 Apr 19 06:46 runtime_log.err
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas       786 Apr 19 06:46 BymLDm3N3P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6efLDmDWibFn.diag
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 06:46 boinc_mmap_file
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas        29 Apr 19 06:46 wrapper_checkpoint.txt
[2025-04-19 06:46:14] -rw-r--r-- 1 boincer umatlas     23093 Apr 19 06:46 stderr.txt
[2025-04-19 06:46:14] HITS file was successfully produced:
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas 189560207 Apr 19 06:44 shared/HITS.pool.root.1
[2025-04-19 06:46:14]  *** Contents of shared directory: ***
[2025-04-19 06:46:14] total 408280
[2025-04-19 06:46:14] -rw-r--r-- 3 boincer umatlas 225090705 Apr 18 15:19 ATLAS.root_0
[2025-04-19 06:46:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 15:19 start_atlas.sh
[2025-04-19 06:46:14] -rw-r--r-- 2 boincer umatlas    508890 Apr 18 15:19 input.tar.gz
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas 189560207 Apr 19 06:44 HITS.pool.root.1
[2025-04-19 06:46:14] -rw------- 1 boincer umatlas   2887680 Apr 19 06:46 result.tar.gz
06:46:16 (10897): run_atlas exited; CPU time 58238.616991
06:46:16 (10897): called boinc_finish(0)

</stderr_txt>
]]>

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