Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:59:36 (906207): wrapper (7.7.26015): starting
06:59:36 (906207): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 06:59:36] Arguments: --nthreads 3
[2025-04-19 06:59:36] Threads: 3
[2025-04-19 06:59:36] Checking for CVMFS
[2025-04-19 06:59:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 06:59:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 06:59:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 06:59:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 06:59:36] 2.9.2.0 2908 3671 85500 145026 0 56 26152749 36864000 0 130560 0 2343838 99.987 873093 12455 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 06:59:36] CVMFS is ok
[2025-04-19 06:59:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 06:59:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 06:59:36] Further information can be found at the LHC@home message board.
[2025-04-19 06:59:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 06:59:36] Checking for apptainer binary...
[2025-04-19 06:59:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 06:59:36] Running /usr/bin/apptainer --version
[2025-04-19 06:59:36] apptainer version 1.3.6-6.1
[2025-04-19 06:59:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 06:59:36] thA367
[2025-04-19 06:59:36] apptainer works
[2025-04-19 06:59:36] Set ATHENA_PROC_NUMBER=3
[2025-04-19 06:59:36] Set ATHENA_CORE_NUMBER=3
[2025-04-19 06:59:36] Starting ATLAS job with PandaID=6603684040
[2025-04-19 06:59:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 08:31:05]  *** The last 200 lines of the pilot log: ***
[2025-04-19 08:31:05]  lfn=log.44075483._026680.job.log.tgz.1
[2025-04-19 08:31:05]  mtime=0
[2025-04-19 08:31:05]  protocol_id=None
[2025-04-19 08:31:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 08:31:05]  replicas=None
[2025-04-19 08:31:05]  scope=mc23_13p6TeV
[2025-04-19 08:31:05]  status=None
[2025-04-19 08:31:05]  status_code=0
[2025-04-19 08:31:05]  storage_token=
[2025-04-19 08:31:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6603684040/log.44075483._026680.job.log.tgz.1
[2025-04-19 08:31:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/b3/log.44075483._026680.job.log.tgz.1
[2025-04-19 08:31:05]  workdir=None
[2025-04-19 08:31:05] ]
[2025-04-19 08:31:05] 2025-04-19 06:30:21,706 | INFO     | transferring file log.44075483._026680.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6603684040/log.44075483._026680.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 08:31:05] 2025-04-19 06:30:21,706 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6603684040/log.44075483._026680.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0266
[2025-04-19 08:31:05] 2025-04-19 06:30:21,720 | INFO     | adding to output.list: log.44075483._026680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/b3/log.44075483._026680.job.log.tg
[2025-04-19 08:31:05] 2025-04-19 06:30:21,721 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 08:31:05] 2025-04-19 06:30:21,721 | INFO     | summary of transferred files:
[2025-04-19 08:31:05] 2025-04-19 06:30:21,721 | INFO     |  -- lfn=log.44075483._026680.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 08:31:05] 2025-04-19 06:30:21,721 | INFO     | stage-out finished correctly
[2025-04-19 08:31:05] 2025-04-19 06:30:23,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | job 6603684040 has state=finished
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | preparing for final server update for job 6603684040 in state='finished'
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | this job has now completed (state=finished)
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | log transfer has been attempted: DONE
[2025-04-19 08:31:05] 2025-04-19 06:30:23,625 | INFO     | job 6603684040 has finished - writing final server update
[2025-04-19 08:31:05] 2025-04-19 06:30:23,626 | INFO     | total number of processed events: 400 (read)
[2025-04-19 08:31:05] 2025-04-19 06:30:23,626 | INFO     | executing command: lscpu
[2025-04-19 08:31:05] 2025-04-19 06:30:23,640 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 08:31:05] 2025-04-19 06:30:26,033 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 08:31:05] 2025-04-19 06:30:26,033 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6603684040/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:31:05] 2025-04-19 06:30:26,034 | INFO     | extracted standard info from prmon json
[2025-04-19 08:31:05] 2025-04-19 06:30:26,034 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 08:31:05] 2025-04-19 06:30:26,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 08:31:05] 2025-04-19 06:30:26,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 08:31:05] 2025-04-19 06:30:26,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | fitting pss+swap vs Time
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | sum of square deviations: 170944600.5
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | sum of deviations: 7038791952.000002
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | mean x: 1745041576.5
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | mean y: 2323655.7560975607
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | -- intersect: -71851274344.10349
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | intersect: -71851274344.10349
[2025-04-19 08:31:05] 2025-04-19 06:30:26,035 | INFO     | chi2: 0.8966173574763067
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | -- intersect: -71851274344.10349
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | current memory leak: 41.18 B/s (using 82 data points, chi2=0.90)
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | ..............................
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . Timing measurements:
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . get job = 0 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . initial setup = 1 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . payload setup = 3 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . stage-in = 0 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . payload execution = 5419 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . stage-out = 0 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | . log creation = 0 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,036 | INFO     | ..............................
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | 
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | job summary report
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | --------------------------------------------------
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | PanDA job id: 6603684040
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | task id: 44075483
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | errors: (none)
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | pilot state: finished 
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | transexitcode: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | exeerrorcode: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:26,101 | INFO     | exeerrordiag: 
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | exitcode: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | exitmsg: OK
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | cpuconsumptiontime: 14213 s
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | nevents: 400
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | neventsw: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | pid: 916279
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | pgrp: 916279
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | corecount: 3
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | event service: False
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | sizes: {0: 2426776, 3: 2426982, 11: 2427010, 5426: 2453558, 5427: 2462505, 5429: 2462561, 5431: 2462859}
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | --------------------------------------------------
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | 
[2025-04-19 08:31:05] 2025-04-19 06:30:26,102 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 08:31:05] 2025-04-19 06:30:26,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 08:31:05] 2025-04-19 06:30:26,120 | INFO     | job 6603684040 has completed (purged errors)
[2025-04-19 08:31:05] 2025-04-19 06:30:26,120 | INFO     | overall cleanup function is called
[2025-04-19 08:31:05] 2025-04-19 06:30:27,126 | INFO     | --- collectZombieJob: --- 10, [916279]
[2025-04-19 08:31:05] 2025-04-19 06:30:27,127 | INFO     | zombie collector waiting for pid 916279
[2025-04-19 08:31:05] 2025-04-19 06:30:27,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 08:31:05] 2025-04-19 06:30:27,127 | INFO     | collected zombie processes
[2025-04-19 08:31:05] 2025-04-19 06:30:27,127 | INFO     | will attempt to kill all subprocesses of pid=916279
[2025-04-19 08:31:05] 2025-04-19 06:30:27,168 | INFO     | process IDs to be killed: [916279] (in reverse order)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,193 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 08:31:05] 2025-04-19 06:30:27,194 | INFO     | did not find any defunct processes belonging to 916279
[2025-04-19 08:31:05] 2025-04-19 06:30:27,195 | INFO     | did not find any defunct processes belonging to 916279
[2025-04-19 08:31:05] 2025-04-19 06:30:27,195 | INFO     | ready for new job
[2025-04-19 08:31:05] 2025-04-19 06:30:27,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 08:31:05] 2025-04-19 06:30:27,196 | INFO     | **************************************
[2025-04-19 08:31:05] 2025-04-19 06:30:27,196 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 08:31:05] 2025-04-19 06:30:27,196 | INFO     | **************************************
[2025-04-19 08:31:05] 2025-04-19 06:30:27,196 | INFO     | 
[2025-04-19 08:31:05] 2025-04-19 06:30:27,197 | INFO     | architecture information:
[2025-04-19 08:31:05] 2025-04-19 06:30:27,197 | INFO     | executing command: cat /etc/os-release
[2025-04-19 08:31:05] 2025-04-19 06:30:27,206 | INFO     | cat /etc/os-release:
[2025-04-19 08:31:05] NAME="CentOS Linux"
[2025-04-19 08:31:05] VERSION="7 (Core)"
[2025-04-19 08:31:05] ID="centos"
[2025-04-19 08:31:05] ID_LIKE="rhel fedora"
[2025-04-19 08:31:05] VERSION_ID="7"
[2025-04-19 08:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 08:31:05] ANSI_COLOR="0;31"
[2025-04-19 08:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 08:31:05] HOME_URL="https://www.centos.org/"
[2025-04-19 08:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 08:31:05] 
[2025-04-19 08:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 08:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 08:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 08:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 08:31:05] 
[2025-04-19 08:31:05] 2025-04-19 06:30:27,206 | INFO     | **************************************
[2025-04-19 08:31:05] 2025-04-19 06:30:27,300 | WARNING  | process 916279 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 08:31:05] 2025-04-19 06:30:27,328 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,328 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,328 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6603684040/payload.stdout) since it has not been created yet
[2025-04-19 08:31:05] 2025-04-19 06:30:27,328 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 08:31:05] 2025-04-19 06:30:27,339 | INFO     | sufficient remaining disk space (274077843456 B)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,339 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-19 08:31:05] 2025-04-19 06:30:27,339 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6603684040/HITS.44075483._026680.pool.root.1 since it does not exist
[2025-04-19 08:31:05] 2025-04-19 06:30:27,376 | INFO     | number of running child processes to parent process 916279: 1
[2025-04-19 08:31:05] 2025-04-19 06:30:27,376 | INFO     | maximum number of monitored processes: 6
[2025-04-19 08:31:05] 2025-04-19 06:30:27,376 | INFO     | aborting job monitoring since job object (job id=6603684040) has expired
[2025-04-19 08:31:05] 2025-04-19 06:30:27,710 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | INFO     | sufficient remaining disk space (274077843456 B)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | INFO     | update_server=False
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | INFO     | will abort loop
[2025-04-19 08:31:05] 2025-04-19 06:30:27,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 08:31:05] 2025-04-19 06:30:27,723 | INFO     | all job control threads have been joined
[2025-04-19 08:31:05] 2025-04-19 06:30:28,417 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 08:31:05] 2025-04-19 06:30:28,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 08:31:05] 2025-04-19 06:30:28,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 08:31:05] 2025-04-19 06:30:28,559 | INFO     | all data control threads have been joined
[2025-04-19 08:31:05] 2025-04-19 06:30:28,728 | INFO     | [job] retrieve thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:28,728 | INFO     | [job] queue monitor thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:28,728 | INFO     | [job] job monitor thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:28,728 | INFO     | [job] control thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:28,731 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:28,759 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,021 | INFO     | all payload control threads have been joined
[2025-04-19 08:31:05] 2025-04-19 06:30:29,230 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,565 | INFO     | [data] control thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 08:31:05] 2025-04-19 06:30:29,728 | INFO     | [data] copytool_out thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,765 | INFO     | [payload] validate_post thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:29,812 | INFO     | [data] copytool_in thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:30,027 | INFO     | [payload] control thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:30,149 | INFO     | [payload] failed_post thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:30,190 | INFO     | [job] validate thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:33,640 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 08:31:05] 2025-04-19 06:30:34,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257080723264)>', '<ExcThread(monitor, started 140256800114432)>']
[2025-04-19 08:31:05] 2025-04-19 06:30:35,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 08:31:05] 2025-04-19 06:30:35,453 | INFO     | [monitor] control thread has ended
[2025-04-19 08:31:05] 2025-04-19 06:30:39,725 | INFO     | all workflow threads have been joined
[2025-04-19 08:31:05] 2025-04-19 06:30:39,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 08:31:05] 2025-04-19 06:30:39,726 | INFO     | traces error code: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:39,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 08:31:05] 2025-04-19 06:30:39,776 [wrapper] ==== pilot stdout END ====
[2025-04-19 08:31:05] 2025-04-19 06:30:39,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 08:31:05] 2025-04-19 06:30:39,781 [wrapper] pilotpid: 909850
[2025-04-19 08:31:05] 2025-04-19 06:30:39,784 [wrapper] Pilot exit status: 0
[2025-04-19 08:31:05] 2025-04-19 06:30:39,792 [wrapper] pandaids: 6603684040
[2025-04-19 08:31:05] 2025-04-19 06:30:39,808 [wrapper] cleanup supervisor_pilot  928396 909851
[2025-04-19 08:31:05] 2025-04-19 06:30:39,811 [wrapper] Test setup, not cleaning
[2025-04-19 08:31:05] 2025-04-19 06:30:39,814 [wrapper] apfmon messages muted
[2025-04-19 08:31:05] 2025-04-19 06:30:39,816 [wrapper] ==== wrapper stdout END ====
[2025-04-19 08:31:05] 2025-04-19 06:30:39,819 [wrapper] ==== wrapper stderr END ====
[2025-04-19 08:31:05]  *** Error codes and diagnostics ***
[2025-04-19 08:31:05]     "exeErrorCode": 0,
[2025-04-19 08:31:05]     "exeErrorDiag": "",
[2025-04-19 08:31:05]     "pilotErrorCode": 0,
[2025-04-19 08:31:05]     "pilotErrorDiag": "",
[2025-04-19 08:31:05]  *** Listing of results directory ***
[2025-04-19 08:31:05] total 412924
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc    495897 Apr 15 11:34 pilot3.tar.gz
[2025-04-19 08:31:05] -rwx------ 1 boinc boinc     37140 Apr 15 11:53 runpilot2-wrapper.sh
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc      5111 Apr 15 11:53 queuedata.json
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc       100 Apr 19 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 08:31:05] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 06:59 run_atlas
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc       105 Apr 19 06:59 job.xml
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc 224270428 Apr 19 06:59 EVNT.44075481._001041.pool.root.1
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc      6929 Apr 19 06:59 init_data.xml
[2025-04-19 08:31:05] drwxrwx--x 2 boinc boinc      4096 Apr 19 06:59 shared
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc    508886 Apr 19 06:59 input.tar.gz
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc     17569 Apr 19 06:59 start_atlas.sh
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc         0 Apr 19 06:59 boinc_lockfile
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc      2578 Apr 19 06:59 pandaJob.out
[2025-04-19 08:31:05] -rw------- 1 boinc boinc       424 Apr 19 06:59 setup.sh.local
[2025-04-19 08:31:05] -rw------- 1 boinc boinc    991292 Apr 19 06:59 agis_schedconf.cvmfs.json
[2025-04-19 08:31:05] -rw------- 1 boinc boinc   1618536 Apr 19 06:59 agis_ddmendpoints.agis.ALL.json
[2025-04-19 08:31:05] drwx------ 4 boinc boinc      4096 Apr 19 06:59 pilot3
[2025-04-19 08:31:05] -rw------- 1 boinc boinc 193150989 Apr 19 08:30 HITS.44075483._026680.pool.root.1
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc       529 Apr 19 08:30 boinc_task_state.xml
[2025-04-19 08:31:05] -rw------- 1 boinc boinc        95 Apr 19 08:30 pilot_heartbeat.json
[2025-04-19 08:31:05] -rw------- 1 boinc boinc      1021 Apr 19 08:30 memory_monitor_summary.json
[2025-04-19 08:31:05] -rw------- 1 boinc boinc    243879 Apr 19 08:30 log.44075483._026680.job.log.tgz.1
[2025-04-19 08:31:05] -rw------- 1 boinc boinc      7653 Apr 19 08:30 heartbeat.json
[2025-04-19 08:31:05] -rw------- 1 boinc boinc      5650 Apr 19 08:30 pilotlog.txt
[2025-04-19 08:31:05] -rw------- 1 boinc boinc    525137 Apr 19 08:30 log.44075483._026680.job.log.1
[2025-04-19 08:31:05] -rw------- 1 boinc boinc       357 Apr 19 08:30 output.list
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc       620 Apr 19 08:30 runtime_log
[2025-04-19 08:31:05] -rw------- 1 boinc boinc    788480 Apr 19 08:30 result.tar.gz
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc     11099 Apr 19 08:30 runtime_log.err
[2025-04-19 08:31:05] -rw------- 1 boinc boinc       658 Apr 19 08:30 aHNKDm09rO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzwXLDmIRSWmm.diag
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc      8192 Apr 19 08:31 boinc_mmap_file
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc        27 Apr 19 08:31 wrapper_checkpoint.txt
[2025-04-19 08:31:05] -rw-r--r-- 1 boinc boinc     21704 Apr 19 08:31 stderr.txt
[2025-04-19 08:31:05] HITS file was successfully produced:
[2025-04-19 08:31:05] -rw------- 1 boinc boinc 193150989 Apr 19 08:30 shared/HITS.pool.root.1
[2025-04-19 08:31:05]  *** Contents of shared directory: ***
[2025-04-19 08:31:05] total 408944
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc 224270428 Apr 19 06:59 ATLAS.root_0
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc    508886 Apr 19 06:59 input.tar.gz
[2025-04-19 08:31:05] -rw-r--r-- 2 boinc boinc     17569 Apr 19 06:59 start_atlas.sh
[2025-04-19 08:31:05] -rw------- 1 boinc boinc 193150989 Apr 19 08:30 HITS.pool.root.1
[2025-04-19 08:31:05] -rw------- 1 boinc boinc    788480 Apr 19 08:30 result.tar.gz
08:31:07 (906207): run_atlas exited; CPU time 14229.184221
08:31:07 (906207): called boinc_finish(0)

</stderr_txt>
]]>

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