Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 05:33:06 (2684): Detected: vboxwrapper 26206
2025-04-20 05:33:06 (2684): Detected: BOINC client v8.0.2
2025-04-20 05:33:07 (2684): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-20 05:33:07 (2684): Detected: Sandbox Configuration Enabled
2025-04-20 05:33:08 (2684): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 05:33:09 (2684): Create VM. (boinc_18e15c84d8498a99, slot#0)
2025-04-20 05:33:10 (2684): Setting Memory Size for VM. (4400MB)
2025-04-20 05:33:10 (2684): Setting CPU Count for VM. (4)
2025-04-20 05:33:11 (2684): Setting Chipset Options for VM.
2025-04-20 05:33:11 (2684): Setting Graphics Controller Options for VM.
2025-04-20 05:33:12 (2684): Setting Boot Options for VM.
2025-04-20 05:33:13 (2684): Setting Network Configuration for NAT.
2025-04-20 05:33:13 (2684): Enabling VM Network Access.
2025-04-20 05:33:14 (2684): Disabling USB Support for VM.
2025-04-20 05:33:14 (2684): Disabling COM Port Support for VM.
2025-04-20 05:33:15 (2684): Disabling Audio Support for VM.
2025-04-20 05:33:16 (2684): Disabling Clipboard Support for VM.
2025-04-20 05:33:16 (2684): Disabling Drag and Drop Support for VM.
2025-04-20 05:33:17 (2684): Adding storage controller(s) to VM.
2025-04-20 05:33:17 (2684): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 05:33:22 (2684): Adding VirtualBox Guest Additions to VM.
2025-04-20 05:33:23 (2684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 05:33:23 (2684): forwarding host port 53995 to guest port 80
2025-04-20 05:33:24 (2684): Enabling remote desktop for VM.
2025-04-20 05:33:24 (2684): Required extension pack not installed, remote desktop not enabled.
2025-04-20 05:33:24 (2684): Enabling shared directory for VM.
2025-04-20 05:33:25 (2684): Starting VM using VBoxManage interface. (boinc_18e15c84d8498a99, slot#0)
2025-04-20 05:33:31 (2684): Successfully started VM. (PID = '2766')
2025-04-20 05:33:31 (2684): Reporting VM Process ID to BOINC.
2025-04-20 05:33:31 (2684): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-20 05:33:31 (2684): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 05:33:31 (2684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 05:33:31 (2684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 05:33:31 (2684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 05:33:31 (2684): Detected: Web Application Enabled (http://localhost:53995)
2025-04-20 05:33:31 (2684): Preference change detected
2025-04-20 05:33:31 (2684): Setting CPU throttle for VM. (100%)
2025-04-20 05:33:32 (2684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 05:33:33 (2684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 05:33:33 (2684): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 05:33:36 (2684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 05:33:36 (2684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 05:33:36 (2684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 05:33:46 (2684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 05:33:46 (2684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 05:34:03 (2684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000342 main     Log opened 2025-04-19T19:34:00.792721000Z
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000642 main     OS Product: Linux
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000743 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000836 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000932 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000934 main     Process ID: 1312
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.000936 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 05:34:03 (2684): Guest Log: 00:00:00.005631 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 05:34:04 (2684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 05:34:04 (2684): Guest Log: [INFO] Mounting shared directory
2025-04-20 05:34:04 (2684): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 05:34:17 (2684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 05:34:17 (2684): Guest Log: [INFO] Detected branch: prod
2025-04-20 05:34:18 (2684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 05:34:18 (2684): Guest Log: Copying input files
2025-04-20 05:34:24 (2684): Guest Log: Copied input files into RunAtlas.
2025-04-20 05:34:24 (2684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 05:34:24 (2684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 05:34:24 (2684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 05:34:24 (2684): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 05:34:38 (2684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 05:34:39 (2684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 05:34:39 (2684): Guest Log: 2.6.3.0 1607 0 30160 145049 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 05:34:40 (2684): Guest Log: copied the webapp to /var/www
2025-04-20 05:34:40 (2684): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-20 05:34:41 (2684): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-20 05:34:42 (2684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 05:34:42 (2684): Guest Log:  *** Starting ATLAS job. (PandaID=6606629541 taskID=44075483) ***
2025-04-20 05:48:12 (2684): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 05:58:20 (2684): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 07:23:53 (2684): Status Report: Elapsed Time: '6000.140200'
2025-04-20 07:23:53 (2684): Status Report: CPU Time: '16341.080000'
2025-04-20 09:04:14 (2684): Status Report: Elapsed Time: '12000.987497'
2025-04-20 09:04:14 (2684): Status Report: CPU Time: '39045.410000'
2025-04-20 10:44:34 (2684): Status Report: Elapsed Time: '18001.806704'
2025-04-20 10:44:34 (2684): Status Report: CPU Time: '61700.080000'
2025-04-20 12:24:56 (2684): Status Report: Elapsed Time: '24002.635804'
2025-04-20 12:24:56 (2684): Status Report: CPU Time: '84383.190000'
2025-04-20 12:59:18 (2684): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 13:05:12 (2684): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 14:11:08 (2684): Status Report: Elapsed Time: '30003.306719'
2025-04-20 14:11:08 (2684): Status Report: CPU Time: '106451.820000'
2025-04-20 14:40:01 (2684): Guest Log:  *** Job finished ***
2025-04-20 14:40:01 (2684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:04,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:05,357 | INFO     | [job] queue monitor thread has finished
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:08,366 | INFO     | [data] queue_monitor thread has finished
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:09,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559010068288)>', '<ExcThread(monitor, started 140558425118464)>']
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:10,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:10,472 | INFO     | [monitor] control thread has ended
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,668 | INFO     | all workflow threads have been joined
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,668 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,669 | INFO     | traces error code: 0
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,885 [wrapper] ==== pilot stdout END ====
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,906 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,926 [wrapper] pilotpid: 5952
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:14,944 [wrapper] Pilot exit status: 0
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,777 [wrapper] pandaids: 6606629541
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,918 [wrapper] cleanup supervisor_pilot 28647 5953
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,940 [wrapper] Test setup, not cleaning
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,952 [wrapper] apfmon messages muted
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,967 [wrapper] ==== wrapper stdout END ====
2025-04-20 14:40:01 (2684): Guest Log: 2025-04-20 04:24:15,986 [wrapper] ==== wrapper stderr END ====
2025-04-20 14:40:01 (2684): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 14:40:01 (2684): Guest Log:     "exeErrorCode": 0,
2025-04-20 14:40:01 (2684): Guest Log:     "exeErrorDiag": "",
2025-04-20 14:40:01 (2684): Guest Log:     "pilotErrorCode": 0,
2025-04-20 14:40:01 (2684): Guest Log:     "pilotErrorDiag": "",
2025-04-20 14:40:01 (2684): Guest Log:  *** Listing of results directory ***
2025-04-20 14:40:02 (2684): Guest Log: total 204560
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 18 15:37 queuedata.json
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 18 15:37 pilot3.tar.gz
2025-04-20 14:40:02 (2684): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 18 15:37 runpilot2-wrapper.sh
2025-04-20 14:40:02 (2684): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 19 19:34 start_atlas.sh
2025-04-20 14:40:02 (2684): Guest Log: -rw-r-----. 1 atlas atlas    508891 Apr 19 19:34 input.tar.gz
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas      6164 Apr 19 19:34 init_data.xml
2025-04-20 14:40:02 (2684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 19:34 EVNT.44075481._002757.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 19 19:34 pandaJob.out
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 19:34 setup.sh.local
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas    991284 Apr 19 19:38 agis_schedconf.cvmfs.json
2025-04-20 14:40:02 (2684): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 19:39 pilot3
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas 201061989 Apr 20 04:22 HITS.44075483._070978.pool.root.1
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 20 04:23 memory_monitor_summary.json
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas        95 Apr 20 04:23 pilot_heartbeat.json
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 20 04:23 agis_ddmendpoints.agis.ALL.json
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas    412495 Apr 20 04:23 log.44075483._070978.job.log.tgz.1
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas      7693 Apr 20 04:23 heartbeat.json
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas      4729 Apr 20 04:24 pilotlog.txt
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas   1888422 Apr 20 04:24 log.44075483._070978.job.log.1
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas       357 Apr 20 04:24 output.list
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 20 04:24 runtime_log
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas   2324480 Apr 20 04:24 result.tar.gz
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Apr 20 04:24 runtime_log.err
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas       670 Apr 20 04:24 40GMDmqx2P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGcfLDmQ49rjm.diag
2025-04-20 14:40:02 (2684): Guest Log: Looking for outputfile HITS.44075483._070978.pool.root.1
2025-04-20 14:40:02 (2684): Guest Log: HITS file was successfully produced
2025-04-20 14:40:02 (2684): Guest Log: -rw-------. 1 atlas atlas 201061989 Apr 20 04:22 /home/atlas/RunAtlas/HITS.44075483._070978.pool.root.1
2025-04-20 14:40:02 (2684): Guest Log: Successfully finished the ATLAS job!
2025-04-20 14:40:02 (2684): Guest Log: Copying the results back to the shared directory!
2025-04-20 14:40:02 (2684): Guest Log:  *** Contents of shared directory: ***
2025-04-20 14:40:02 (2684): Guest Log: total 227632
2025-04-20 14:40:02 (2684): Guest Log: -rw-rw----. 1 root root 221330971 Apr 19 19:33 ATLAS.root_0
2025-04-20 14:40:02 (2684): Guest Log: -rw-rw-r--. 1 root root      6164 Apr 19 19:33 init_data.xml
2025-04-20 14:40:02 (2684): Guest Log: -rw-rw----. 1 root root    508891 Apr 19 19:33 input.tar.gz
2025-04-20 14:40:02 (2684): Guest Log: -rw-r--r--. 1 root root   2324480 Apr 20  2025 result.tar.gz
2025-04-20 14:40:02 (2684): Guest Log: -rw-rw----. 1 root root     17569 Apr 19 19:33 start_atlas.sh
2025-04-20 14:40:02 (2684): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 14:40:02 (2684): VM Completion File Detected.
2025-04-20 14:40:02 (2684): Powering off VM.
2025-04-20 14:40:03 (2684): Successfully stopped VM.
2025-04-20 14:40:03 (2684): Deregistering VM. (boinc_18e15c84d8498a99, slot#0)
2025-04-20 14:40:04 (2684): Removing network bandwidth throttle group from VM.
2025-04-20 14:40:04 (2684): Removing VM from VirtualBox.
14:40:10 (2684): called boinc_finish(0)

</stderr_txt>
]]>

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