Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:54 (313): wrapper (7.7.26015): starting
14:29:54 (313): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 14:29:54] Arguments: --nthreads 12
[2025-04-18 14:29:54] Threads: 12
[2025-04-18 14:29:54] Checking for CVMFS
[2025-04-18 14:29:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 14:29:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 14:29:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 14:29:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 14:29:54] 2.11.2.0 10995 193224 158148 145012 2 55 19193583 20275200 1 130560 0 23185979 99.990 7019305 48704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 14:29:54] CVMFS is ok
[2025-04-18 14:29:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 14:29:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 14:29:54] Further information can be found at the LHC@home message board.
[2025-04-18 14:29:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 14:29:54] Checking for apptainer binary...
[2025-04-18 14:29:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 14:29:54] Running /usr/bin/apptainer --version
[2025-04-18 14:29:54] apptainer version 1.3.2-1.el7
[2025-04-18 14:29:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 14:29:56] c-205-22.aglt2.org
[2025-04-18 14:29:56] apptainer works
[2025-04-18 14:29:56] Set ATHENA_PROC_NUMBER=12
[2025-04-18 14:29:56] Set ATHENA_CORE_NUMBER=12
[2025-04-18 14:29:56] Starting ATLAS job with PandaID=6606629394
[2025-04-18 14:29:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 15:53:20]  *** The last 200 lines of the pilot log: ***
[2025-04-18 15:53:20]  filetype=log
[2025-04-18 15:53:20]  guid=a7045a7c-bfc0-4d52-9ae2-6c0afd0bfae7
[2025-04-18 15:53:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 15:53:20]  is_altstaged=None
[2025-04-18 15:53:20]  is_tar=False
[2025-04-18 15:53:20]  lfn=log.44075483._070831.job.log.tgz.1
[2025-04-18 15:53:20]  mtime=0
[2025-04-18 15:53:20]  protocol_id=None
[2025-04-18 15:53:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 15:53:20]  replicas=None
[2025-04-18 15:53:20]  scope=mc23_13p6TeV
[2025-04-18 15:53:20]  status=None
[2025-04-18 15:53:20]  status_code=0
[2025-04-18 15:53:20]  storage_token=
[2025-04-18 15:53:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606629394/log.44075483._070831.job.log.tgz.1
[2025-04-18 15:53:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/13/log.44075483._070831.job.log.tgz.1
[2025-04-18 15:53:20]  workdir=None
[2025-04-18 15:53:20] ]
[2025-04-18 15:53:20] 2025-04-18 19:52:53,798 | INFO     | transferring file log.44075483._070831.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606629394/log.44075483._070831.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 15:53:20] 2025-04-18 19:52:53,799 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606629394/log.44075483._070831.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._070831.job
[2025-04-18 15:53:20] 2025-04-18 19:52:53,820 | INFO     | adding to output.list: log.44075483._070831.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/13/log.44075483._070831.job.log.tg
[2025-04-18 15:53:20] 2025-04-18 19:52:53,821 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 15:53:20] 2025-04-18 19:52:53,821 | INFO     | summary of transferred files:
[2025-04-18 15:53:20] 2025-04-18 19:52:53,821 | INFO     |  -- lfn=log.44075483._070831.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 15:53:20] 2025-04-18 19:52:53,821 | INFO     | stage-out finished correctly
[2025-04-18 15:53:20] 2025-04-18 19:52:56,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 15:53:20] 2025-04-18 19:52:56,905 | INFO     | job 6606629394 has state=finished
[2025-04-18 15:53:20] 2025-04-18 19:52:56,905 | INFO     | preparing for final server update for job 6606629394 in state='finished'
[2025-04-18 15:53:20] 2025-04-18 19:52:56,906 | INFO     | this job has now completed (state=finished)
[2025-04-18 15:53:20] 2025-04-18 19:52:56,906 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 15:53:20] 2025-04-18 19:52:56,906 | INFO     | log transfer has been attempted: DONE
[2025-04-18 15:53:20] 2025-04-18 19:52:56,906 | INFO     | job 6606629394 has finished - writing final server update
[2025-04-18 15:53:20] 2025-04-18 19:52:56,907 | INFO     | total number of processed events: 400 (read)
[2025-04-18 15:53:20] 2025-04-18 19:52:56,908 | INFO     | executing command: lscpu
[2025-04-18 15:53:20] 2025-04-18 19:52:56,934 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 15:53:20] 2025-04-18 19:52:57,636 | INFO     | PID=4298 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 15:53:20] 2025-04-18 19:52:59,111 | WARNING  | process 10664 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 15:53:20] 2025-04-18 19:52:59,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606629394/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 15:53:20] 2025-04-18 19:52:59,202 | INFO     | number of running child processes to parent process 10664: 1
[2025-04-18 15:53:20] 2025-04-18 19:52:59,202 | INFO     | maximum number of monitored processes: 6
[2025-04-18 15:53:20] 2025-04-18 19:53:01,524 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 15:53:20] 2025-04-18 19:53:01,525 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606629394/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 15:53:20] 2025-04-18 19:53:01,526 | INFO     | extracted standard info from prmon json
[2025-04-18 15:53:20] 2025-04-18 19:53:01,526 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 15:53:20] 2025-04-18 19:53:01,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 15:53:20] 2025-04-18 19:53:01,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 15:53:20] 2025-04-18 19:53:01,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 15:53:20] 2025-04-18 19:53:01,529 | INFO     | fitting pss+swap vs Time
[2025-04-18 15:53:20] 2025-04-18 19:53:01,529 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 15:53:20] 2025-04-18 19:53:01,530 | INFO     | sum of deviations: 17613236929.000008
[2025-04-18 15:53:20] 2025-04-18 19:53:01,530 | INFO     | mean x: 1745003570.5
[2025-04-18 15:53:20] 2025-04-18 19:53:01,530 | INFO     | mean y: 2643901.189189189
[2025-04-18 15:53:20] 2025-04-18 19:53:01,530 | INFO     | -- intersect: -244645108300.77307
[2025-04-18 15:53:20] 2025-04-18 19:53:01,530 | INFO     | intersect: -244645108300.77307
[2025-04-18 15:53:20] 2025-04-18 19:53:01,531 | INFO     | chi2: 2.3777801081243832
[2025-04-18 15:53:20] 2025-04-18 19:53:01,531 | INFO     | -- intersect: -244645108300.77307
[2025-04-18 15:53:20] 2025-04-18 19:53:01,531 | INFO     | current memory leak: 140.20 B/s (using 74 data points, chi2=2.38)
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | ..............................
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . Timing measurements:
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . get job = 0 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . initial setup = 3 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . payload setup = 7 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . stage-in = 0 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,532 | INFO     | . payload execution = 4935 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,533 | INFO     | . stage-out = 0 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,533 | INFO     | . log creation = 0 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,533 | INFO     | ..............................
[2025-04-18 15:53:20] 2025-04-18 19:53:01,744 | INFO     | 
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | job summary report
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | --------------------------------------------------
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | PanDA job id: 6606629394
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | task id: 44075483
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | errors: (none)
[2025-04-18 15:53:20] 2025-04-18 19:53:01,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | pilot state: finished 
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | transexitcode: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | exeerrorcode: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | exeerrordiag: 
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | exitcode: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:01,746 | INFO     | exitmsg: OK
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | cpuconsumptiontime: 46780 s
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | nevents: 400
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | neventsw: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | pid: 10664
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | pgrp: 10664
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | corecount: 12
[2025-04-18 15:53:20] 2025-04-18 19:53:01,747 | INFO     | event service: False
[2025-04-18 15:53:20] 2025-04-18 19:53:01,748 | INFO     | sizes: {0: 2426824, 1: 2426852, 5: 2427058, 11: 2427114, 4946: 2453263, 4948: 2462204, 4950: 2462388, 4956: 2462558}
[2025-04-18 15:53:20] 2025-04-18 19:53:01,748 | INFO     | --------------------------------------------------
[2025-04-18 15:53:20] 2025-04-18 19:53:01,748 | INFO     | 
[2025-04-18 15:53:20] 2025-04-18 19:53:01,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 15:53:20] 2025-04-18 19:53:01,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 15:53:20] 2025-04-18 19:53:01,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 15:53:20] 2025-04-18 19:53:01,776 | INFO     | job 6606629394 has completed (purged errors)
[2025-04-18 15:53:20] 2025-04-18 19:53:01,776 | INFO     | overall cleanup function is called
[2025-04-18 15:53:20] 2025-04-18 19:53:02,784 | INFO     | --- collectZombieJob: --- 10, [10664]
[2025-04-18 15:53:20] 2025-04-18 19:53:02,784 | INFO     | zombie collector waiting for pid 10664
[2025-04-18 15:53:20] 2025-04-18 19:53:02,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 15:53:20] 2025-04-18 19:53:02,784 | INFO     | collected zombie processes
[2025-04-18 15:53:20] 2025-04-18 19:53:02,785 | INFO     | will attempt to kill all subprocesses of pid=10664
[2025-04-18 15:53:20] 2025-04-18 19:53:02,873 | INFO     | process IDs to be killed: [10664] (in reverse order)
[2025-04-18 15:53:20] 2025-04-18 19:53:02,922 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 15:53:20] 2025-04-18 19:53:02,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 15:53:20] 2025-04-18 19:53:02,926 | INFO     | did not find any defunct processes belonging to 10664
[2025-04-18 15:53:20] 2025-04-18 19:53:02,928 | INFO     | did not find any defunct processes belonging to 10664
[2025-04-18 15:53:20] 2025-04-18 19:53:02,928 | INFO     | ready for new job
[2025-04-18 15:53:20] 2025-04-18 19:53:02,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 15:53:20] 2025-04-18 19:53:02,929 | INFO     | **************************************
[2025-04-18 15:53:20] 2025-04-18 19:53:02,930 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 15:53:20] 2025-04-18 19:53:02,930 | INFO     | **************************************
[2025-04-18 15:53:20] 2025-04-18 19:53:02,930 | INFO     | 
[2025-04-18 15:53:20] 2025-04-18 19:53:02,930 | INFO     | architecture information:
[2025-04-18 15:53:20] 2025-04-18 19:53:02,931 | INFO     | executing command: cat /etc/os-release
[2025-04-18 15:53:20] 2025-04-18 19:53:02,945 | INFO     | cat /etc/os-release:
[2025-04-18 15:53:20] NAME="CentOS Linux"
[2025-04-18 15:53:20] VERSION="7 (Core)"
[2025-04-18 15:53:20] ID="centos"
[2025-04-18 15:53:20] ID_LIKE="rhel fedora"
[2025-04-18 15:53:20] VERSION_ID="7"
[2025-04-18 15:53:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 15:53:20] ANSI_COLOR="0;31"
[2025-04-18 15:53:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 15:53:20] HOME_URL="https://www.centos.org/"
[2025-04-18 15:53:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 15:53:20] 
[2025-04-18 15:53:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 15:53:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 15:53:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 15:53:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 15:53:20] 
[2025-04-18 15:53:20] 2025-04-18 19:53:02,945 | INFO     | **************************************
[2025-04-18 15:53:20] 2025-04-18 19:53:03,448 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 15:53:20] 2025-04-18 19:53:03,471 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-04-18 15:53:20] 2025-04-18 19:53:03,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 15:53:20] 2025-04-18 19:53:03,472 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 15:53:20] 2025-04-18 19:53:03,472 | INFO     | update_server=False
[2025-04-18 15:53:20] 2025-04-18 19:53:03,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 15:53:20] 2025-04-18 19:53:03,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 15:53:20] 2025-04-18 19:53:03,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 15:53:20] 2025-04-18 19:53:03,473 | INFO     | aborting loop
[2025-04-18 15:53:20] 2025-04-18 19:53:03,651 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 15:53:20] 2025-04-18 19:53:03,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 15:53:20] 2025-04-18 19:53:03,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 15:53:20] 2025-04-18 19:53:03,806 | INFO     | all job control threads have been joined
[2025-04-18 15:53:20] 2025-04-18 19:53:04,182 | INFO     | all data control threads have been joined
[2025-04-18 15:53:20] 2025-04-18 19:53:04,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 15:53:20] 2025-04-18 19:53:04,477 | INFO     | [job] retrieve thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,478 | INFO     | [job] queue monitor thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,479 | INFO     | [job] job monitor thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,574 | INFO     | [payload] validate_post thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,593 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,794 | INFO     | [payload] failed_post thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,811 | INFO     | [job] control thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:04,837 | INFO     | all payload control threads have been joined
[2025-04-18 15:53:20] 2025-04-18 19:53:04,905 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:05,146 | INFO     | [data] copytool_in thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:05,187 | INFO     | [data] control thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:05,293 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:05,842 | INFO     | [payload] control thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:05,958 | INFO     | [job] validate thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:06,427 | INFO     | [data] copytool_out thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:06,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 15:53:20] 2025-04-18 19:53:10,879 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:13,812 | INFO     | job.realtimelogging is not enabled
[2025-04-18 15:53:20] 2025-04-18 19:53:14,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 15:53:20] 2025-04-18 19:53:14,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571388143424)>', '<ExcThread(monitor, started 140571075122944)>']
[2025-04-18 15:53:20] 2025-04-18 19:53:15,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 15:53:20] 2025-04-18 19:53:15,713 | INFO     | [monitor] control thread has ended
[2025-04-18 15:53:20] 2025-04-18 19:53:19,849 | INFO     | all workflow threads have been joined
[2025-04-18 15:53:20] 2025-04-18 19:53:19,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 15:53:20] 2025-04-18 19:53:19,850 | INFO     | traces error code: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:19,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 15:53:20] 2025-04-18 19:53:19,944 [wrapper] ==== pilot stdout END ====
[2025-04-18 15:53:20] 2025-04-18 19:53:19,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 15:53:20] 2025-04-18 19:53:19,951 [wrapper] pilotpid: 4298
[2025-04-18 15:53:20] 2025-04-18 19:53:19,955 [wrapper] Pilot exit status: 0
[2025-04-18 15:53:20] 2025-04-18 19:53:19,972 [wrapper] pandaids: 6606629394
[2025-04-18 15:53:20] 2025-04-18 19:53:20,011 [wrapper] cleanup supervisor_pilot 27086 4299
[2025-04-18 15:53:20] 2025-04-18 19:53:20,015 [wrapper] Test setup, not cleaning
[2025-04-18 15:53:20] 2025-04-18 19:53:20,019 [wrapper] apfmon messages muted
[2025-04-18 15:53:20] 2025-04-18 19:53:20,023 [wrapper] ==== wrapper stdout END ====
[2025-04-18 15:53:20] 2025-04-18 19:53:20,027 [wrapper] ==== wrapper stderr END ====
[2025-04-18 15:53:20]  *** Error codes and diagnostics ***
[2025-04-18 15:53:20]     "exeErrorCode": 0,
[2025-04-18 15:53:20]     "exeErrorDiag": "",
[2025-04-18 15:53:20]     "pilotErrorCode": 0,
[2025-04-18 15:53:20]     "pilotErrorDiag": "",
[2025-04-18 15:53:20]  *** Listing of results directory ***
[2025-04-18 15:53:20] total 414044
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 10:26 pilot3.tar.gz
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 11:19 queuedata.json
[2025-04-18 15:53:20] -rwx------ 1 boincer umatlas     37140 Apr 18 11:21 runpilot2-wrapper.sh
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas       100 Apr 18 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 15:53:20] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 14:29 run_atlas
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas       105 Apr 18 14:29 job.xml
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas 222104899 Apr 18 14:29 EVNT.44075481._002751.pool.root.1
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 14:29 start_atlas.sh
[2025-04-18 15:53:20] drwxrwx--x 2 boincer umatlas      4096 Apr 18 14:29 shared
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 14:29 input.tar.gz
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas         0 Apr 18 14:29 boinc_lockfile
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 14:29 pandaJob.out
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas       424 Apr 18 14:29 setup.sh.local
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas    991292 Apr 18 14:30 agis_schedconf.cvmfs.json
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas   1618536 Apr 18 14:30 agis_ddmendpoints.agis.ALL.json
[2025-04-18 15:53:20] drwx------ 4 boincer umatlas      4096 Apr 18 14:30 pilot3
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 15:46 init_data.xml
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas        95 Apr 18 15:52 pilot_heartbeat.json
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas 196346984 Apr 18 15:52 HITS.44075483._070831.pool.root.1
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas       529 Apr 18 15:52 boinc_task_state.xml
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas      1049 Apr 18 15:52 memory_monitor_summary.json
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas    363623 Apr 18 15:52 log.44075483._070831.job.log.tgz.1
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas      7750 Apr 18 15:53 heartbeat.json
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 15:53 boinc_mmap_file
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas        27 Apr 18 15:53 wrapper_checkpoint.txt
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas      4425 Apr 18 15:53 pilotlog.txt
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas    471235 Apr 18 15:53 log.44075483._070831.job.log.1
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas       357 Apr 18 15:53 output.list
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas       620 Apr 18 15:53 runtime_log
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas    849920 Apr 18 15:53 result.tar.gz
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 15:53 runtime_log.err
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas       658 Apr 18 15:53 FCbMDmrh2P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhafLDmZpc6Im.diag
[2025-04-18 15:53:20] -rw-r--r-- 1 boincer umatlas     21271 Apr 18 15:53 stderr.txt
[2025-04-18 15:53:20] HITS file was successfully produced:
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas 196346984 Apr 18 15:52 shared/HITS.pool.root.1
[2025-04-18 15:53:20]  *** Contents of shared directory: ***
[2025-04-18 15:53:20] total 410000
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas 222104899 Apr 18 14:29 ATLAS.root_0
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 14:29 start_atlas.sh
[2025-04-18 15:53:20] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 14:29 input.tar.gz
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas 196346984 Apr 18 15:52 HITS.pool.root.1
[2025-04-18 15:53:20] -rw------- 1 boincer umatlas    849920 Apr 18 15:53 result.tar.gz
15:53:21 (313): run_atlas exited; CPU time 46762.574375
15:53:21 (313): called boinc_finish(0)

</stderr_txt>
]]>

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