Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:27:50 (1866244): wrapper (7.7.26015): starting
03:27:50 (1866244): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 03:27:50] Arguments: --nthreads 3
[2025-04-19 03:27:50] Threads: 3
[2025-04-19 03:27:50] Checking for CVMFS
[2025-04-19 03:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:27:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:27:50] 2.9.2.0 850720 2022 64024 145021 1 55 25566979 36864001 0 130560 0 1399449 99.991 405133 15452 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 03:27:50] CVMFS is ok
[2025-04-19 03:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:27:50] Further information can be found at the LHC@home message board.
[2025-04-19 03:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:27:50] Checking for apptainer binary...
[2025-04-19 03:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:27:50] Running /usr/bin/apptainer --version
[2025-04-19 03:27:51] apptainer version 1.3.6-4.1
[2025-04-19 03:27:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:27:51] atlasA219a
[2025-04-19 03:27:51] apptainer works
[2025-04-19 03:27:51] Set ATHENA_PROC_NUMBER=3
[2025-04-19 03:27:51] Set ATHENA_CORE_NUMBER=3
[2025-04-19 03:27:51] Starting ATLAS job with PandaID=6606554960
[2025-04-19 03:27:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:06:06]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:06:06]  mtime=0
[2025-04-19 05:06:06]  protocol_id=None
[2025-04-19 05:06:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 05:06:06]  replicas=None
[2025-04-19 05:06:06]  scope=mc23_13p6TeV
[2025-04-19 05:06:06]  status=None
[2025-04-19 05:06:06]  status_code=0
[2025-04-19 05:06:06]  storage_token=
[2025-04-19 05:06:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606554960/log.44075483._070450.job.log.tgz.1
[2025-04-19 05:06:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/64/log.44075483._070450.job.log.tgz.1
[2025-04-19 05:06:06]  workdir=None
[2025-04-19 05:06:06] ]
[2025-04-19 05:06:06] 2025-04-19 03:05:36,153 | INFO     | transferring file log.44075483._070450.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606554960/log.44075483._070450.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 05:06:06] 2025-04-19 03:05:36,154 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606554960/log.44075483._070450.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0704
[2025-04-19 05:06:06] 2025-04-19 03:05:36,166 | INFO     | adding to output.list: log.44075483._070450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/64/log.44075483._070450.job.log.tg
[2025-04-19 05:06:06] 2025-04-19 03:05:36,166 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:06:06] 2025-04-19 03:05:36,166 | INFO     | summary of transferred files:
[2025-04-19 05:06:06] 2025-04-19 03:05:36,167 | INFO     |  -- lfn=log.44075483._070450.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:06:06] 2025-04-19 03:05:36,167 | INFO     | stage-out finished correctly
[2025-04-19 05:06:06] 2025-04-19 03:05:37,704 | WARNING  | process 1876490 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 05:06:06] 2025-04-19 03:05:37,705 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606554960/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:06:06] 2025-04-19 03:05:37,740 | INFO     | number of running child processes to parent process 1876490: 1
[2025-04-19 05:06:06] 2025-04-19 03:05:37,740 | INFO     | maximum number of monitored processes: 6
[2025-04-19 05:06:06] 2025-04-19 03:05:39,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:06:06] 2025-04-19 03:05:40,243 | INFO     | monitor loop #450: job 0:6606554960 is in state 'finished'
[2025-04-19 05:06:06] 2025-04-19 03:05:40,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:06:06] 2025-04-19 03:05:41,420 | INFO     | job 6606554960 has state=finished
[2025-04-19 05:06:06] 2025-04-19 03:05:41,421 | INFO     | preparing for final server update for job 6606554960 in state='finished'
[2025-04-19 05:06:06] 2025-04-19 03:05:41,422 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:06:06] 2025-04-19 03:05:41,422 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:06:06] 2025-04-19 03:05:41,422 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:06:06] 2025-04-19 03:05:41,422 | INFO     | job 6606554960 has finished - writing final server update
[2025-04-19 05:06:06] 2025-04-19 03:05:41,423 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:06:06] 2025-04-19 03:05:41,425 | INFO     | executing command: lscpu
[2025-04-19 05:06:06] 2025-04-19 03:05:41,439 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:06:06] 2025-04-19 03:05:42,568 | INFO     | PID=1869966 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 05:06:06] 2025-04-19 03:05:42,747 | INFO     | monitor loop #451: job 0:6606554960 is in state 'finished'
[2025-04-19 05:06:06] 2025-04-19 03:05:42,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:06:06] 2025-04-19 03:05:45,251 | INFO     | monitor loop #452: job 0:6606554960 is in state 'finished'
[2025-04-19 05:06:06] 2025-04-19 03:05:45,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:06:06] 2025-04-19 03:05:45,963 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 05:06:06] 2025-04-19 03:05:45,963 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606554960/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:06:06] 2025-04-19 03:05:45,963 | INFO     | extracted standard info from prmon json
[2025-04-19 05:06:06] 2025-04-19 03:05:45,963 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:06:06] 2025-04-19 03:05:45,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:06:06] 2025-04-19 03:05:45,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:06:06] 2025-04-19 03:05:45,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:06:06] 2025-04-19 03:05:45,964 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | sum of square deviations: 218571540.0
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | sum of deviations: 1197329533.0000007
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | mean x: 1745029099.0
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | mean y: 2378320.741573034
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | -- intersect: -9556848265.560934
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | intersect: -9556848265.560934
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | chi2: 1.0202049533942226
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | -- intersect: -9556848265.560934
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | current memory leak: 5.48 B/s (using 89 data points, chi2=1.02)
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | ..............................
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . Timing measurements:
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . get job = 0 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . initial setup = 1 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . payload setup = 6 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . stage-in = 0 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . payload execution = 5826 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,965 | INFO     | . stage-out = 0 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,966 | INFO     | . log creation = 0 s
[2025-04-19 05:06:06] 2025-04-19 03:05:45,966 | INFO     | ..............................
[2025-04-19 05:06:06] 2025-04-19 03:05:46,261 | INFO     | 
[2025-04-19 05:06:06] 2025-04-19 03:05:46,262 | INFO     | job summary report
[2025-04-19 05:06:06] 2025-04-19 03:05:46,262 | INFO     | --------------------------------------------------
[2025-04-19 05:06:06] 2025-04-19 03:05:46,262 | INFO     | PanDA job id: 6606554960
[2025-04-19 05:06:06] 2025-04-19 03:05:46,262 | INFO     | task id: 44075483
[2025-04-19 05:06:06] 2025-04-19 03:05:46,262 | INFO     | errors: (none)
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | pilot state: finished 
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | transexitcode: 0
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | exeerrorcode: 0
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | exeerrordiag: 
[2025-04-19 05:06:06] 2025-04-19 03:05:46,263 | INFO     | exitcode: 0
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | exitmsg: OK
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | cpuconsumptiontime: 15531 s
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | nevents: 400
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | neventsw: 0
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | pid: 1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | pgrp: 1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | corecount: 3
[2025-04-19 05:06:06] 2025-04-19 03:05:46,264 | INFO     | event service: False
[2025-04-19 05:06:06] 2025-04-19 03:05:46,265 | INFO     | sizes: {0: 2426827, 6: 2427033, 11: 2427061, 5836: 2462677, 5839: 2462677, 5846: 2462847}
[2025-04-19 05:06:06] 2025-04-19 03:05:46,265 | INFO     | --------------------------------------------------
[2025-04-19 05:06:06] 2025-04-19 03:05:46,265 | INFO     | 
[2025-04-19 05:06:06] 2025-04-19 03:05:46,265 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 05:06:06] 2025-04-19 03:05:46,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | job 6606554960 has completed (purged errors)
[2025-04-19 05:06:06] 2025-04-19 03:05:46,279 | INFO     | overall cleanup function is called
[2025-04-19 05:06:06] 2025-04-19 03:05:47,286 | INFO     | --- collectZombieJob: --- 10, [1876490]
[2025-04-19 05:06:06] 2025-04-19 03:05:47,286 | INFO     | zombie collector waiting for pid 1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:47,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:06:06] 2025-04-19 03:05:47,287 | INFO     | collected zombie processes
[2025-04-19 05:06:06] 2025-04-19 03:05:47,287 | INFO     | will attempt to kill all subprocesses of pid=1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:47,328 | INFO     | process IDs to be killed: [1876490] (in reverse order)
[2025-04-19 05:06:06] 2025-04-19 03:05:47,355 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:06:06] 2025-04-19 03:05:47,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:06:06] 2025-04-19 03:05:47,356 | INFO     | did not find any defunct processes belonging to 1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:47,357 | INFO     | did not find any defunct processes belonging to 1876490
[2025-04-19 05:06:06] 2025-04-19 03:05:47,357 | INFO     | ready for new job
[2025-04-19 05:06:06] 2025-04-19 03:05:47,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | **************************************
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | **************************************
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | 
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | architecture information:
[2025-04-19 05:06:06] 2025-04-19 03:05:47,358 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:06:06] 2025-04-19 03:05:47,368 | INFO     | cat /etc/os-release:
[2025-04-19 05:06:06] NAME="CentOS Linux"
[2025-04-19 05:06:06] VERSION="7 (Core)"
[2025-04-19 05:06:06] ID="centos"
[2025-04-19 05:06:06] ID_LIKE="rhel fedora"
[2025-04-19 05:06:06] VERSION_ID="7"
[2025-04-19 05:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:06:06] ANSI_COLOR="0;31"
[2025-04-19 05:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:06:06] HOME_URL="https://www.centos.org/"
[2025-04-19 05:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:06:06] 
[2025-04-19 05:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:06:06] 
[2025-04-19 05:06:06] 2025-04-19 03:05:47,368 | INFO     | **************************************
[2025-04-19 05:06:06] 2025-04-19 03:05:47,872 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | INFO     | sufficient remaining disk space (832011501568 B)
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | INFO     | update_server=False
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:06:06] 2025-04-19 03:05:47,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:06:06] 2025-04-19 03:05:48,201 | INFO     | all payload control threads have been joined
[2025-04-19 05:06:06] 2025-04-19 03:05:48,223 | INFO     | all job control threads have been joined
[2025-04-19 05:06:06] 2025-04-19 03:05:48,586 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:06:06] 2025-04-19 03:05:48,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:06:06] 2025-04-19 03:05:48,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:06:06] 2025-04-19 03:05:48,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:06:06] 2025-04-19 03:05:48,761 | INFO     | aborting loop
[2025-04-19 05:06:06] 2025-04-19 03:05:48,892 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:48,892 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:48,989 | INFO     | all data control threads have been joined
[2025-04-19 05:06:06] 2025-04-19 03:05:49,116 | INFO     | [job] validate thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,139 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,206 | INFO     | [payload] control thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:06:06] 2025-04-19 03:05:49,228 | INFO     | [job] control thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,338 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:06:06] 2025-04-19 03:05:49,691 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,766 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,793 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:49,995 | INFO     | [data] control thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:50,218 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:50,356 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:51,224 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:53,692 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:05:58,408 | INFO     | job.realtimelogging is not enabled
[2025-04-19 05:06:06] 2025-04-19 03:05:59,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:06:06] 2025-04-19 03:06:01,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483649013568)>', '<ExcThread(monitor, started 140482927646464)>']
[2025-04-19 05:06:06] 2025-04-19 03:06:01,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:06:06] 2025-04-19 03:06:01,656 | INFO     | [monitor] control thread has ended
[2025-04-19 05:06:06] 2025-04-19 03:06:06,496 | INFO     | all workflow threads have been joined
[2025-04-19 05:06:06] 2025-04-19 03:06:06,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:06:06] 2025-04-19 03:06:06,497 | INFO     | traces error code: 0
[2025-04-19 05:06:06] 2025-04-19 03:06:06,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:06:06] 2025-04-19 03:06:06,583 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:06:06] 2025-04-19 03:06:06,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:06:06] 2025-04-19 03:06:06,589 [wrapper] pilotpid: 1869966
[2025-04-19 05:06:06] 2025-04-19 03:06:06,592 [wrapper] Pilot exit status: 0
[2025-04-19 05:06:06] 2025-04-19 03:06:06,599 [wrapper] pandaids: 6606554960
[2025-04-19 05:06:06] 2025-04-19 03:06:06,617 [wrapper] cleanup supervisor_pilot 1909605 1869967
[2025-04-19 05:06:06] 2025-04-19 03:06:06,620 [wrapper] Test setup, not cleaning
[2025-04-19 05:06:06] 2025-04-19 03:06:06,622 [wrapper] apfmon messages muted
[2025-04-19 05:06:06] 2025-04-19 03:06:06,625 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:06:06] 2025-04-19 03:06:06,628 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:06:06]  *** Error codes and diagnostics ***
[2025-04-19 05:06:06]     "exeErrorCode": 0,
[2025-04-19 05:06:06]     "exeErrorDiag": "",
[2025-04-19 05:06:06]     "pilotErrorCode": 0,
[2025-04-19 05:06:06]     "pilotErrorDiag": "",
[2025-04-19 05:06:06]  *** Listing of results directory ***
[2025-04-19 05:06:06] total 411248
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc    495897 Apr 18 16:26 pilot3.tar.gz
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc      5111 Apr 18 16:47 queuedata.json
[2025-04-19 05:06:06] -rwx------ 1 boinc boinc     37140 Apr 18 16:49 runpilot2-wrapper.sh
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc       100 Apr 19 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:06:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 03:27 run_atlas
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc       105 Apr 19 03:27 job.xml
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc 224994829 Apr 19 03:27 EVNT.44075481._002737.pool.root.1
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc      6681 Apr 19 03:27 init_data.xml
[2025-04-19 05:06:06] drwxrwx--x 2 boinc boinc      4096 Apr 19 03:27 shared
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc    508893 Apr 19 03:27 input.tar.gz
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:27 start_atlas.sh
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc         0 Apr 19 03:27 boinc_lockfile
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc      2579 Apr 19 03:27 pandaJob.out
[2025-04-19 05:06:06] -rw------- 1 boinc boinc       424 Apr 19 03:27 setup.sh.local
[2025-04-19 05:06:06] -rw------- 1 boinc boinc    991292 Apr 19 03:28 agis_schedconf.cvmfs.json
[2025-04-19 05:06:06] -rw------- 1 boinc boinc   1618536 Apr 19 03:28 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:06:06] drwx------ 4 boinc boinc      4096 Apr 19 03:28 pilot3
[2025-04-19 05:06:06] -rw------- 1 boinc boinc 190649135 Apr 19 05:05 HITS.44075483._070450.pool.root.1
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc       529 Apr 19 05:05 boinc_task_state.xml
[2025-04-19 05:06:06] -rw------- 1 boinc boinc        95 Apr 19 05:05 pilot_heartbeat.json
[2025-04-19 05:06:06] -rw------- 1 boinc boinc      1016 Apr 19 05:05 memory_monitor_summary.json
[2025-04-19 05:06:06] -rw------- 1 boinc boinc    239628 Apr 19 05:05 log.44075483._070450.job.log.tgz.1
[2025-04-19 05:06:06] -rw------- 1 boinc boinc      7663 Apr 19 05:05 heartbeat.json
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc      8192 Apr 19 05:06 boinc_mmap_file
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc        27 Apr 19 05:06 wrapper_checkpoint.txt
[2025-04-19 05:06:06] -rw------- 1 boinc boinc      4429 Apr 19 05:06 pilotlog.txt
[2025-04-19 05:06:06] -rw------- 1 boinc boinc    561963 Apr 19 05:06 log.44075483._070450.job.log.1
[2025-04-19 05:06:06] -rw------- 1 boinc boinc       357 Apr 19 05:06 output.list
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc       620 Apr 19 05:06 runtime_log
[2025-04-19 05:06:06] -rw------- 1 boinc boinc    819200 Apr 19 05:06 result.tar.gz
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc     11119 Apr 19 05:06 runtime_log.err
[2025-04-19 05:06:06] -rw------- 1 boinc boinc       662 Apr 19 05:06 firLDmsC2P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvVfLDm18KGVn.diag
[2025-04-19 05:06:06] -rw-r--r-- 1 boinc boinc     21720 Apr 19 05:06 stderr.txt
[2025-04-19 05:06:06] HITS file was successfully produced:
[2025-04-19 05:06:06] -rw------- 1 boinc boinc 190649135 Apr 19 05:05 shared/HITS.pool.root.1
[2025-04-19 05:06:06]  *** Contents of shared directory: ***
[2025-04-19 05:06:06] total 407236
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc 224994829 Apr 19 03:27 ATLAS.root_0
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc    508893 Apr 19 03:27 input.tar.gz
[2025-04-19 05:06:06] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:27 start_atlas.sh
[2025-04-19 05:06:06] -rw------- 1 boinc boinc 190649135 Apr 19 05:05 HITS.pool.root.1
[2025-04-19 05:06:06] -rw------- 1 boinc boinc    819200 Apr 19 05:06 result.tar.gz
05:06:08 (1866244): run_atlas exited; CPU time 15562.607900
05:06:08 (1866244): called boinc_finish(0)

</stderr_txt>
]]>

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