Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:03 (16109): wrapper (7.7.26015): starting
13:52:03 (16109): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 13:52:03] Arguments: --nthreads 8
[2025-04-18 13:52:03] Threads: 8
[2025-04-18 13:52:03] Checking for CVMFS
[2025-04-18 13:52:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 13:52:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 13:52:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 13:52:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 13:52:03] 2.11.2.0 2776 160734 115984 145010 1 56 10868311 20275200 1 130560 0 19763436 99.964 7851999 45702 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 13:52:03] CVMFS is ok
[2025-04-18 13:52:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 13:52:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 13:52:03] Further information can be found at the LHC@home message board.
[2025-04-18 13:52:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 13:52:03] Checking for apptainer binary...
[2025-04-18 13:52:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 13:52:04] Running /usr/bin/apptainer --version
[2025-04-18 13:52:04] apptainer version 1.3.2-1.el7
[2025-04-18 13:52:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 13:52:05] c-204-36.aglt2.org
[2025-04-18 13:52:05] apptainer works
[2025-04-18 13:52:05] Set ATHENA_PROC_NUMBER=8
[2025-04-18 13:52:05] Set ATHENA_CORE_NUMBER=8
[2025-04-18 13:52:05] Starting ATLAS job with PandaID=6606554704
[2025-04-18 13:52:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 16:01:55]  *** The last 200 lines of the pilot log: ***
[2025-04-18 16:01:55] 2025-04-18 20:01:41,242 | INFO     | extracted standard info from prmon json
[2025-04-18 16:01:55] 2025-04-18 20:01:41,242 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 16:01:55] 2025-04-18 20:01:41,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 16:01:55] 2025-04-18 20:01:41,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 16:01:55] 2025-04-18 20:01:41,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 16:01:55] 2025-04-18 20:01:41,247 | INFO     | fitting pss+swap vs Time
[2025-04-18 16:01:55] 2025-04-18 20:01:41,247 | INFO     | sum of square deviations: 635130048.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,248 | INFO     | sum of deviations: 16772358516.999994
[2025-04-18 16:01:55] 2025-04-18 20:01:41,248 | INFO     | mean x: 1745002614.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,248 | INFO     | mean y: 2481296.31496063
[2025-04-18 16:01:55] 2025-04-18 20:01:41,248 | INFO     | -- intersect: -46079119703.784706
[2025-04-18 16:01:55] 2025-04-18 20:01:41,249 | INFO     | intersect: -46079119703.784706
[2025-04-18 16:01:55] 2025-04-18 20:01:41,249 | INFO     | chi2: 2.5552022560248266
[2025-04-18 16:01:55] 2025-04-18 20:01:41,249 | INFO     | sum of square deviations: 563026370.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,250 | INFO     | sum of deviations: 16237193317.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,250 | INFO     | mean x: 1745002461.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,250 | INFO     | mean y: 2480163.901639344
[2025-04-18 16:01:55] 2025-04-18 20:01:41,250 | INFO     | -- intersect: -50321880808.48792
[2025-04-18 16:01:55] 2025-04-18 20:01:41,251 | INFO     | intersect: -50321880808.48792
[2025-04-18 16:01:55] 2025-04-18 20:01:41,251 | INFO     | chi2: 2.5608781551985804
[2025-04-18 16:01:55] 2025-04-18 20:01:41,251 | INFO     | current chi2=2.5608781551985804 (change=-0.22213111155372375 %)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,251 | INFO     | right removable region: 121
[2025-04-18 16:01:55] 2025-04-18 20:01:41,252 | INFO     | sum of square deviations: 563026370.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,252 | INFO     | sum of deviations: -12742785899.500015
[2025-04-18 16:01:55] 2025-04-18 20:01:41,252 | INFO     | mean x: 1745002766.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,253 | INFO     | mean y: 2543390.7622950817
[2025-04-18 16:01:55] 2025-04-18 20:01:41,253 | INFO     | -- intersect: 39496602306.329056
[2025-04-18 16:01:55] 2025-04-18 20:01:41,253 | INFO     | intersect: 39496602306.329056
[2025-04-18 16:01:55] 2025-04-18 20:01:41,253 | INFO     | chi2: 0.2336954797596654
[2025-04-18 16:01:55] 2025-04-18 20:01:41,253 | INFO     | current chi2=0.2336954797596654 (change=90.854129875291 %)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,254 | INFO     | sum of square deviations: 496597218.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,254 | INFO     | sum of deviations: -16700622211.999996
[2025-04-18 16:01:55] 2025-04-18 20:01:41,255 | INFO     | mean x: 1745002919.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,255 | INFO     | mean y: 2552245.418803419
[2025-04-18 16:01:55] 2025-04-18 20:01:41,255 | INFO     | -- intersect: 58687203412.86902
[2025-04-18 16:01:55] 2025-04-18 20:01:41,255 | INFO     | intersect: 58687203412.86902
[2025-04-18 16:01:55] 2025-04-18 20:01:41,256 | INFO     | chi2: 0.11672920696610108
[2025-04-18 16:01:55] 2025-04-18 20:01:41,256 | INFO     | current chi2=0.11672920696610108 (change=50.05072109818022 %)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,256 | INFO     | sum of square deviations: 435610028.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,257 | INFO     | sum of deviations: -13265549616.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,257 | INFO     | mean x: 1745003071.5
[2025-04-18 16:01:55] 2025-04-18 20:01:41,257 | INFO     | mean y: 2543636.4375
[2025-04-18 16:01:55] 2025-04-18 20:01:41,257 | INFO     | -- intersect: 53142791422.30378
[2025-04-18 16:01:55] 2025-04-18 20:01:41,257 | INFO     | intersect: 53142791422.30378
[2025-04-18 16:01:55] 2025-04-18 20:01:41,258 | INFO     | chi2: 0.1116014553541885
[2025-04-18 16:01:55] 2025-04-18 20:01:41,258 | INFO     | current chi2=0.1116014553541885 (change=4.39286083165262 %)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,258 | INFO     | left removable region: 30
[2025-04-18 16:01:55] 2025-04-18 20:01:41,258 | INFO     | sum of square deviations: 233641590.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,259 | INFO     | sum of deviations: -1501554040.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,259 | INFO     | mean x: 1745003346.0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,259 | INFO     | mean y: 2507987.263736264
[2025-04-18 16:01:55] 2025-04-18 20:01:41,259 | INFO     | -- intersect: 11217192941.25595
[2025-04-18 16:01:55] 2025-04-18 20:01:41,259 | INFO     | intersect: 11217192941.25595
[2025-04-18 16:01:55] 2025-04-18 20:01:41,260 | INFO     | chi2: 0.03594802001290667
[2025-04-18 16:01:55] 2025-04-18 20:01:41,260 | INFO     | -- intersect: 11217192941.25595
[2025-04-18 16:01:55] 2025-04-18 20:01:41,260 | INFO     | current memory leak: -6.43 B/s (using 91 data points, chi2=0.04)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,260 | INFO     | ..............................
[2025-04-18 16:01:55] 2025-04-18 20:01:41,260 | INFO     | . Timing measurements:
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . get job = 0 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . initial setup = 2 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . payload setup = 8 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . stage-in = 0 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . payload execution = 7726 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . stage-out = 0 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | . log creation = 0 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,261 | INFO     | ..............................
[2025-04-18 16:01:55] 2025-04-18 20:01:41,356 | INFO     | 
[2025-04-18 16:01:55] 2025-04-18 20:01:41,356 | INFO     | job summary report
[2025-04-18 16:01:55] 2025-04-18 20:01:41,356 | INFO     | --------------------------------------------------
[2025-04-18 16:01:55] 2025-04-18 20:01:41,356 | INFO     | PanDA job id: 6606554704
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | task id: 44075483
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | errors: (none)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | pilot state: finished 
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | transexitcode: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | exeerrorcode: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | exeerrordiag: 
[2025-04-18 16:01:55] 2025-04-18 20:01:41,357 | INFO     | exitcode: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | exitmsg: OK
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | cpuconsumptiontime: 55915 s
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | nevents: 400
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | neventsw: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | pid: 26151
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | pgrp: 26151
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | corecount: 8
[2025-04-18 16:01:55] 2025-04-18 20:01:41,358 | INFO     | event service: False
[2025-04-18 16:01:55] 2025-04-18 20:01:41,359 | INFO     | sizes: {0: 2426823, 6: 2427029, 11: 2427057, 7738: 2454484, 7739: 2463425, 7740: 2463481, 7745: 2463779}
[2025-04-18 16:01:55] 2025-04-18 20:01:41,359 | INFO     | --------------------------------------------------
[2025-04-18 16:01:55] 2025-04-18 20:01:41,359 | INFO     | 
[2025-04-18 16:01:55] 2025-04-18 20:01:41,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 16:01:55] 2025-04-18 20:01:41,386 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,386 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 16:01:55] 2025-04-18 20:01:41,390 | INFO     | job 6606554704 has completed (purged errors)
[2025-04-18 16:01:55] 2025-04-18 20:01:41,390 | INFO     | overall cleanup function is called
[2025-04-18 16:01:55] 2025-04-18 20:01:42,398 | INFO     | --- collectZombieJob: --- 10, [26151]
[2025-04-18 16:01:55] 2025-04-18 20:01:42,399 | INFO     | zombie collector waiting for pid 26151
[2025-04-18 16:01:55] 2025-04-18 20:01:42,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 16:01:55] 2025-04-18 20:01:42,399 | INFO     | collected zombie processes
[2025-04-18 16:01:55] 2025-04-18 20:01:42,399 | INFO     | will attempt to kill all subprocesses of pid=26151
[2025-04-18 16:01:55] 2025-04-18 20:01:42,620 | INFO     | PID=19710 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 16:01:55] 2025-04-18 20:01:42,624 | INFO     | process IDs to be killed: [26151] (in reverse order)
[2025-04-18 16:01:55] 2025-04-18 20:01:42,681 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 16:01:55] 2025-04-18 20:01:42,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 16:01:55] 2025-04-18 20:01:42,686 | INFO     | did not find any defunct processes belonging to 26151
[2025-04-18 16:01:55] 2025-04-18 20:01:42,690 | INFO     | did not find any defunct processes belonging to 26151
[2025-04-18 16:01:55] 2025-04-18 20:01:42,690 | INFO     | ready for new job
[2025-04-18 16:01:55] 2025-04-18 20:01:42,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 16:01:55] 2025-04-18 20:01:42,692 | INFO     | **************************************
[2025-04-18 16:01:55] 2025-04-18 20:01:42,692 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 16:01:55] 2025-04-18 20:01:42,692 | INFO     | **************************************
[2025-04-18 16:01:55] 2025-04-18 20:01:42,692 | INFO     | 
[2025-04-18 16:01:55] 2025-04-18 20:01:42,693 | INFO     | architecture information:
[2025-04-18 16:01:55] 2025-04-18 20:01:42,693 | INFO     | executing command: cat /etc/os-release
[2025-04-18 16:01:55] 2025-04-18 20:01:42,711 | INFO     | cat /etc/os-release:
[2025-04-18 16:01:55] NAME="CentOS Linux"
[2025-04-18 16:01:55] VERSION="7 (Core)"
[2025-04-18 16:01:55] ID="centos"
[2025-04-18 16:01:55] ID_LIKE="rhel fedora"
[2025-04-18 16:01:55] VERSION_ID="7"
[2025-04-18 16:01:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 16:01:55] ANSI_COLOR="0;31"
[2025-04-18 16:01:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 16:01:55] HOME_URL="https://www.centos.org/"
[2025-04-18 16:01:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 16:01:55] 
[2025-04-18 16:01:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 16:01:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 16:01:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 16:01:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 16:01:55] 
[2025-04-18 16:01:55] 2025-04-18 20:01:42,711 | INFO     | **************************************
[2025-04-18 16:01:55] 2025-04-18 20:01:43,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 16:01:55] 2025-04-18 20:01:43,234 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-04-18 16:01:55] 2025-04-18 20:01:43,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 16:01:55] 2025-04-18 20:01:43,234 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 16:01:55] 2025-04-18 20:01:43,235 | INFO     | update_server=False
[2025-04-18 16:01:55] 2025-04-18 20:01:43,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 16:01:55] 2025-04-18 20:01:43,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:01:55] 2025-04-18 20:01:43,235 | INFO     | aborting loop
[2025-04-18 16:01:55] 2025-04-18 20:01:43,236 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 16:01:55] 2025-04-18 20:01:43,236 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 16:01:55] 2025-04-18 20:01:43,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 16:01:55] 2025-04-18 20:01:43,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 16:01:55] 2025-04-18 20:01:43,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:01:55] 2025-04-18 20:01:43,289 | INFO     | all payload control threads have been joined
[2025-04-18 16:01:55] 2025-04-18 20:01:43,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 16:01:55] 2025-04-18 20:01:44,008 | INFO     | all data control threads have been joined
[2025-04-18 16:01:55] 2025-04-18 20:01:44,240 | INFO     | [job] job monitor thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,241 | INFO     | [job] retrieve thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,242 | INFO     | [job] queue monitor thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,271 | INFO     | all job control threads have been joined
[2025-04-18 16:01:55] 2025-04-18 20:01:44,294 | INFO     | [payload] control thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,604 | INFO     | [payload] failed_post thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,758 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:44,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,001 | INFO     | [data] copytool_in thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,013 | INFO     | [data] control thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,276 | INFO     | [job] control thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,402 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,404 | INFO     | [job] validate thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,519 | INFO     | [payload] validate_post thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,642 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:45,885 | INFO     | [data] copytool_out thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:46,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 16:01:55] 2025-04-18 20:01:50,469 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 16:01:55] 2025-04-18 20:01:50,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341237454656)>', '<ExcThread(monitor, started 140340061267712)>']
[2025-04-18 16:01:55] 2025-04-18 20:01:51,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 16:01:55] 2025-04-18 20:01:51,278 | INFO     | [monitor] control thread has ended
[2025-04-18 16:01:55] 2025-04-18 20:01:55,534 | INFO     | all workflow threads have been joined
[2025-04-18 16:01:55] 2025-04-18 20:01:55,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 16:01:55] 2025-04-18 20:01:55,536 | INFO     | traces error code: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:55,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 16:01:55] 2025-04-18 20:01:55,643 [wrapper] ==== pilot stdout END ====
[2025-04-18 16:01:55] 2025-04-18 20:01:55,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 16:01:55] 2025-04-18 20:01:55,651 [wrapper] pilotpid: 19710
[2025-04-18 16:01:55] 2025-04-18 20:01:55,655 [wrapper] Pilot exit status: 0
[2025-04-18 16:01:55] 2025-04-18 20:01:55,673 [wrapper] pandaids: 6606554704
[2025-04-18 16:01:55] 2025-04-18 20:01:55,716 [wrapper] cleanup supervisor_pilot 11959 19711
[2025-04-18 16:01:55] 2025-04-18 20:01:55,721 [wrapper] Test setup, not cleaning
[2025-04-18 16:01:55] 2025-04-18 20:01:55,725 [wrapper] apfmon messages muted
[2025-04-18 16:01:55] 2025-04-18 20:01:55,730 [wrapper] ==== wrapper stdout END ====
[2025-04-18 16:01:55] 2025-04-18 20:01:55,734 [wrapper] ==== wrapper stderr END ====
[2025-04-18 16:01:55]  *** Error codes and diagnostics ***
[2025-04-18 16:01:55]     "exeErrorCode": 0,
[2025-04-18 16:01:55]     "exeErrorDiag": "",
[2025-04-18 16:01:55]     "pilotErrorCode": 0,
[2025-04-18 16:01:55]     "pilotErrorDiag": "",
[2025-04-18 16:01:55]  *** Listing of results directory ***
[2025-04-18 16:01:55] total 416492
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 10:26 pilot3.tar.gz
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 10:47 queuedata.json
[2025-04-18 16:01:55] -rwx------ 1 boincer umatlas     37140 Apr 18 10:48 runpilot2-wrapper.sh
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas       100 Apr 18 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 16:01:55] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 13:52 run_atlas
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas       105 Apr 18 13:52 job.xml
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas 225131554 Apr 18 13:52 EVNT.44075481._002736.pool.root.1
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:52 start_atlas.sh
[2025-04-18 16:01:55] drwxrwx--x 2 boincer umatlas      4096 Apr 18 13:52 shared
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas    508897 Apr 18 13:52 input.tar.gz
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas         0 Apr 18 13:52 boinc_lockfile
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 13:52 pandaJob.out
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas       462 Apr 18 13:52 setup.sh.local
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas    991292 Apr 18 13:52 agis_schedconf.cvmfs.json
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas   1618536 Apr 18 13:52 agis_ddmendpoints.agis.ALL.json
[2025-04-18 16:01:55] drwx------ 4 boincer umatlas      4096 Apr 18 13:52 pilot3
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas      5905 Apr 18 16:00 init_data.xml
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas 195417936 Apr 18 16:01 HITS.44075483._070416.pool.root.1
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas        95 Apr 18 16:01 pilot_heartbeat.json
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas       529 Apr 18 16:01 boinc_task_state.xml
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas      1048 Apr 18 16:01 memory_monitor_summary.json
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas    326317 Apr 18 16:01 log.44075483._070416.job.log.tgz.1
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas      7748 Apr 18 16:01 heartbeat.json
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 16:01 boinc_mmap_file
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas        27 Apr 18 16:01 wrapper_checkpoint.txt
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas      4476 Apr 18 16:01 pilotlog.txt
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas    709628 Apr 18 16:01 log.44075483._070416.job.log.1
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas       357 Apr 18 16:01 output.list
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas       620 Apr 18 16:01 runtime_log
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas   1054720 Apr 18 16:01 result.tar.gz
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas       659 Apr 18 16:01 zbNNDm0B2P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnVfLDmA23Uem.diag
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas     11388 Apr 18 16:01 runtime_log.err
[2025-04-18 16:01:55] -rw-r--r-- 1 boincer umatlas     20865 Apr 18 16:01 stderr.txt
[2025-04-18 16:01:55] HITS file was successfully produced:
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas 195417936 Apr 18 16:01 shared/HITS.pool.root.1
[2025-04-18 16:01:55]  *** Contents of shared directory: ***
[2025-04-18 16:01:55] total 412252
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas 225131554 Apr 18 13:52 ATLAS.root_0
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:52 start_atlas.sh
[2025-04-18 16:01:55] -rw-r--r-- 2 boincer umatlas    508897 Apr 18 13:52 input.tar.gz
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas 195417936 Apr 18 16:01 HITS.pool.root.1
[2025-04-18 16:01:55] -rw------- 1 boincer umatlas   1054720 Apr 18 16:01 result.tar.gz
16:01:57 (16109): run_atlas exited; CPU time 55853.540509
16:01:57 (16109): called boinc_finish(0)

</stderr_txt>
]]>

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