Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:42:09 (1810637): wrapper (7.7.26015): starting
03:42:09 (1810637): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 03:42:09] Arguments: --nthreads 3
[2025-04-19 03:42:09] Threads: 3
[2025-04-19 03:42:09] Checking for CVMFS
[2025-04-19 03:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:42:09] 2.9.2.0 4036 5878 84844 145021 0 65 19719199 36864000 0 130560 0 4372201 99.991 1364771 7503 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 03:42:09] CVMFS is ok
[2025-04-19 03:42:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:42:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:42:09] Further information can be found at the LHC@home message board.
[2025-04-19 03:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:42:09] Checking for apptainer binary...
[2025-04-19 03:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:42:09] Running /usr/bin/apptainer --version
[2025-04-19 03:42:09] apptainer version 1.3.6-6.1
[2025-04-19 03:42:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:42:09] atlasA215c
[2025-04-19 03:42:09] apptainer works
[2025-04-19 03:42:09] Set ATHENA_PROC_NUMBER=3
[2025-04-19 03:42:09] Set ATHENA_CORE_NUMBER=3
[2025-04-19 03:42:09] Starting ATLAS job with PandaID=6606554428
[2025-04-19 03:42:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:14:57]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:14:57]  lfn=log.44075483._070161.job.log.tgz.1
[2025-04-19 05:14:57]  mtime=0
[2025-04-19 05:14:57]  protocol_id=None
[2025-04-19 05:14:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 05:14:57]  replicas=None
[2025-04-19 05:14:57]  scope=mc23_13p6TeV
[2025-04-19 05:14:57]  status=None
[2025-04-19 05:14:57]  status_code=0
[2025-04-19 05:14:57]  storage_token=
[2025-04-19 05:14:57]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606554428/log.44075483._070161.job.log.tgz.1
[2025-04-19 05:14:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/ff/log.44075483._070161.job.log.tgz.1
[2025-04-19 05:14:57]  workdir=None
[2025-04-19 05:14:57] ]
[2025-04-19 05:14:57] 2025-04-19 03:14:32,808 | INFO     | transferring file log.44075483._070161.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606554428/log.44075483._070161.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 05:14:57] 2025-04-19 03:14:32,808 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606554428/log.44075483._070161.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0701
[2025-04-19 05:14:57] 2025-04-19 03:14:32,821 | INFO     | adding to output.list: log.44075483._070161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/ff/log.44075483._070161.job.log.tg
[2025-04-19 05:14:57] 2025-04-19 03:14:32,822 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:14:57] 2025-04-19 03:14:32,822 | INFO     | summary of transferred files:
[2025-04-19 05:14:57] 2025-04-19 03:14:32,822 | INFO     |  -- lfn=log.44075483._070161.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:14:57] 2025-04-19 03:14:32,822 | INFO     | stage-out finished correctly
[2025-04-19 05:14:57] 2025-04-19 03:14:32,913 | WARNING  | process 1820713 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 05:14:57] 2025-04-19 03:14:32,913 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606554428/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:14:57] 2025-04-19 03:14:32,949 | INFO     | number of running child processes to parent process 1820713: 1
[2025-04-19 05:14:57] 2025-04-19 03:14:32,949 | INFO     | maximum number of monitored processes: 6
[2025-04-19 05:14:57] 2025-04-19 03:14:35,453 | INFO     | monitor loop #425: job 0:6606554428 is in state 'finished'
[2025-04-19 05:14:57] 2025-04-19 03:14:35,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:14:57] 2025-04-19 03:14:35,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:14:57] 2025-04-19 03:14:36,255 | INFO     | job 6606554428 has state=finished
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | preparing for final server update for job 6606554428 in state='finished'
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | job 6606554428 has finished - writing final server update
[2025-04-19 05:14:57] 2025-04-19 03:14:36,256 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:14:57] 2025-04-19 03:14:36,257 | INFO     | executing command: lscpu
[2025-04-19 05:14:57] 2025-04-19 03:14:36,274 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:14:57] 2025-04-19 03:14:37,956 | INFO     | monitor loop #426: job 0:6606554428 is in state 'finished'
[2025-04-19 05:14:57] 2025-04-19 03:14:37,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,568 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 05:14:57] 2025-04-19 03:14:38,568 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606554428/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,569 | INFO     | extracted standard info from prmon json
[2025-04-19 05:14:57] 2025-04-19 03:14:38,569 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:14:57] 2025-04-19 03:14:38,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:14:57] 2025-04-19 03:14:38,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:14:57] 2025-04-19 03:14:38,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | sum of square deviations: 183761585.0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | sum of deviations: 4889865835.000001
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | mean x: 1745029790.5
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | mean y: 2352604.904761905
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | -- intersect: -46432605787.64044
[2025-04-19 05:14:57] 2025-04-19 03:14:38,570 | INFO     | intersect: -46432605787.64044
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | chi2: 0.9380997161335309
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | -- intersect: -46432605787.64044
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | current memory leak: 26.61 B/s (using 84 data points, chi2=0.94)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | ..............................
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . Timing measurements:
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . get job = 0 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . initial setup = 1 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . payload setup = 2 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . stage-in = 0 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . payload execution = 5518 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . stage-out = 0 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | . log creation = 0 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,571 | INFO     | ..............................
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | 
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | job summary report
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | --------------------------------------------------
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | PanDA job id: 6606554428
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | task id: 44075483
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | errors: (none)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | pilot state: finished 
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | transexitcode: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | exeerrorcode: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | exeerrordiag: 
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | exitcode: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | exitmsg: OK
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | cpuconsumptiontime: 14529 s
[2025-04-19 05:14:57] 2025-04-19 03:14:38,603 | INFO     | nevents: 400
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | neventsw: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | pid: 1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | pgrp: 1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | corecount: 3
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | event service: False
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | sizes: {0: 2426821, 2: 2427027, 11: 2427055, 5524: 2453693, 5525: 2462640, 5527: 2462696, 5531: 2462994}
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | --------------------------------------------------
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | 
[2025-04-19 05:14:57] 2025-04-19 03:14:38,604 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | job 6606554428 has completed (purged errors)
[2025-04-19 05:14:57] 2025-04-19 03:14:38,617 | INFO     | overall cleanup function is called
[2025-04-19 05:14:57] 2025-04-19 03:14:39,622 | INFO     | --- collectZombieJob: --- 10, [1820713]
[2025-04-19 05:14:57] 2025-04-19 03:14:39,622 | INFO     | zombie collector waiting for pid 1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:39,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:14:57] 2025-04-19 03:14:39,622 | INFO     | collected zombie processes
[2025-04-19 05:14:57] 2025-04-19 03:14:39,622 | INFO     | will attempt to kill all subprocesses of pid=1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:39,663 | INFO     | process IDs to be killed: [1820713] (in reverse order)
[2025-04-19 05:14:57] 2025-04-19 03:14:39,687 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:14:57] 2025-04-19 03:14:39,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:14:57] 2025-04-19 03:14:39,689 | INFO     | did not find any defunct processes belonging to 1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | did not find any defunct processes belonging to 1820713
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | ready for new job
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | **************************************
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | **************************************
[2025-04-19 05:14:57] 2025-04-19 03:14:39,690 | INFO     | 
[2025-04-19 05:14:57] 2025-04-19 03:14:39,691 | INFO     | architecture information:
[2025-04-19 05:14:57] 2025-04-19 03:14:39,691 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:14:57] 2025-04-19 03:14:39,700 | INFO     | cat /etc/os-release:
[2025-04-19 05:14:57] NAME="CentOS Linux"
[2025-04-19 05:14:57] VERSION="7 (Core)"
[2025-04-19 05:14:57] ID="centos"
[2025-04-19 05:14:57] ID_LIKE="rhel fedora"
[2025-04-19 05:14:57] VERSION_ID="7"
[2025-04-19 05:14:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:14:57] ANSI_COLOR="0;31"
[2025-04-19 05:14:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:14:57] HOME_URL="https://www.centos.org/"
[2025-04-19 05:14:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:14:57] 
[2025-04-19 05:14:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:14:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:14:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:14:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:14:57] 
[2025-04-19 05:14:57] 2025-04-19 03:14:39,700 | INFO     | **************************************
[2025-04-19 05:14:57] 2025-04-19 03:14:40,203 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | INFO     | sufficient remaining disk space (340461092864 B)
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | INFO     | update_server=False
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:14:57] 2025-04-19 03:14:40,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:14:57] 2025-04-19 03:14:40,411 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:14:57] 2025-04-19 03:14:40,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:14:57] 2025-04-19 03:14:40,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:14:57] 2025-04-19 03:14:40,460 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 05:14:57] 2025-04-19 03:14:40,461 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 05:14:57] 2025-04-19 03:14:40,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:14:57] 2025-04-19 03:14:40,461 | INFO     | will abort loop
[2025-04-19 05:14:57] 2025-04-19 03:14:40,464 | INFO     | all payload control threads have been joined
[2025-04-19 05:14:57] 2025-04-19 03:14:40,599 | INFO     | all job control threads have been joined
[2025-04-19 05:14:57] 2025-04-19 03:14:40,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:14:57] 2025-04-19 03:14:41,222 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,223 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,230 | INFO     | all data control threads have been joined
[2025-04-19 05:14:57] 2025-04-19 03:14:41,466 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,469 | INFO     | [payload] control thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:14:57] 2025-04-19 03:14:41,544 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,551 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:41,605 | INFO     | [job] control thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,099 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,100 | INFO     | [job] validate thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,221 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,227 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,236 | INFO     | [data] control thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,527 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:42,872 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:45,534 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:51,264 | INFO     | job.realtimelogging is not enabled
[2025-04-19 05:14:57] 2025-04-19 03:14:52,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:14:57] 2025-04-19 03:14:52,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938081597248)>', '<ExcThread(monitor, started 139937575839488)>']
[2025-04-19 05:14:57] 2025-04-19 03:14:52,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:14:57] 2025-04-19 03:14:52,474 | INFO     | [monitor] control thread has ended
[2025-04-19 05:14:57] 2025-04-19 03:14:57,383 | INFO     | all workflow threads have been joined
[2025-04-19 05:14:57] 2025-04-19 03:14:57,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:14:57] 2025-04-19 03:14:57,383 | INFO     | traces error code: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:57,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:14:57] 2025-04-19 03:14:57,437 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:14:57] 2025-04-19 03:14:57,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:14:57] 2025-04-19 03:14:57,442 [wrapper] pilotpid: 1814289
[2025-04-19 05:14:57] 2025-04-19 03:14:57,444 [wrapper] Pilot exit status: 0
[2025-04-19 05:14:57] 2025-04-19 03:14:57,451 [wrapper] pandaids: 6606554428
[2025-04-19 05:14:57] 2025-04-19 03:14:57,466 [wrapper] cleanup supervisor_pilot 1832674 1814290
[2025-04-19 05:14:57] 2025-04-19 03:14:57,468 [wrapper] Test setup, not cleaning
[2025-04-19 05:14:57] 2025-04-19 03:14:57,471 [wrapper] apfmon messages muted
[2025-04-19 05:14:57] 2025-04-19 03:14:57,473 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:14:57] 2025-04-19 03:14:57,475 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:14:57]  *** Error codes and diagnostics ***
[2025-04-19 05:14:57]     "exeErrorCode": 0,
[2025-04-19 05:14:57]     "exeErrorDiag": "",
[2025-04-19 05:14:57]     "pilotErrorCode": 0,
[2025-04-19 05:14:57]     "pilotErrorDiag": "",
[2025-04-19 05:14:57]  *** Listing of results directory ***
[2025-04-19 05:14:57] total 414724
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc    495897 Apr 18 16:12 pilot3.tar.gz
[2025-04-19 05:14:57] -rwx------ 1 boinc boinc     37140 Apr 18 16:21 runpilot2-wrapper.sh
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc      5111 Apr 18 16:21 queuedata.json
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc       100 Apr 19 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:14:57] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 03:42 run_atlas
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc       105 Apr 19 03:42 job.xml
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc 225282157 Apr 19 03:42 EVNT.44075481._002726.pool.root.1
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc      6926 Apr 19 03:42 init_data.xml
[2025-04-19 05:14:57] drwxrwx--x 2 boinc boinc      4096 Apr 19 03:42 shared
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc    508884 Apr 19 03:42 input.tar.gz
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:42 start_atlas.sh
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc         0 Apr 19 03:42 boinc_lockfile
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc      2576 Apr 19 03:42 pandaJob.out
[2025-04-19 05:14:57] -rw------- 1 boinc boinc       424 Apr 19 03:42 setup.sh.local
[2025-04-19 05:14:57] -rw------- 1 boinc boinc    991292 Apr 19 03:42 agis_schedconf.cvmfs.json
[2025-04-19 05:14:57] -rw------- 1 boinc boinc   1618536 Apr 19 03:42 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:14:57] drwx------ 4 boinc boinc      4096 Apr 19 03:42 pilot3
[2025-04-19 05:14:57] -rw------- 1 boinc boinc        95 Apr 19 05:13 pilot_heartbeat.json
[2025-04-19 05:14:57] -rw------- 1 boinc boinc 194014014 Apr 19 05:14 HITS.44075483._070161.pool.root.1
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc       530 Apr 19 05:14 boinc_task_state.xml
[2025-04-19 05:14:57] -rw------- 1 boinc boinc      1033 Apr 19 05:14 memory_monitor_summary.json
[2025-04-19 05:14:57] -rw------- 1 boinc boinc    220096 Apr 19 05:14 log.44075483._070161.job.log.tgz.1
[2025-04-19 05:14:57] -rw------- 1 boinc boinc      7666 Apr 19 05:14 heartbeat.json
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc      8192 Apr 19 05:14 boinc_mmap_file
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc        27 Apr 19 05:14 wrapper_checkpoint.txt
[2025-04-19 05:14:57] -rw------- 1 boinc boinc      4615 Apr 19 05:14 pilotlog.txt
[2025-04-19 05:14:57] -rw------- 1 boinc boinc    535366 Apr 19 05:14 log.44075483._070161.job.log.1
[2025-04-19 05:14:57] -rw------- 1 boinc boinc       357 Apr 19 05:14 output.list
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc       620 Apr 19 05:14 runtime_log
[2025-04-19 05:14:57] -rw------- 1 boinc boinc    778240 Apr 19 05:14 result.tar.gz
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc     11119 Apr 19 05:14 runtime_log.err
[2025-04-19 05:14:57] -rw------- 1 boinc boinc       663 Apr 19 05:14 QMeKDmnl1P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXSfLDmwUUpWn.diag
[2025-04-19 05:14:57] -rw-r--r-- 1 boinc boinc     21545 Apr 19 05:14 stderr.txt
[2025-04-19 05:14:57] HITS file was successfully produced:
[2025-04-19 05:14:57] -rw------- 1 boinc boinc 194014014 Apr 19 05:14 shared/HITS.pool.root.1
[2025-04-19 05:14:57]  *** Contents of shared directory: ***
[2025-04-19 05:14:57] total 410760
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc 225282157 Apr 19 03:42 ATLAS.root_0
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc    508884 Apr 19 03:42 input.tar.gz
[2025-04-19 05:14:57] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:42 start_atlas.sh
[2025-04-19 05:14:57] -rw------- 1 boinc boinc 194014014 Apr 19 05:14 HITS.pool.root.1
[2025-04-19 05:14:57] -rw------- 1 boinc boinc    778240 Apr 19 05:14 result.tar.gz
05:14:58 (1810637): run_atlas exited; CPU time 14546.291158
05:14:58 (1810637): called boinc_finish(0)

</stderr_txt>
]]>

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