Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:13:34 (40345): wrapper (7.7.26015): starting
13:13:34 (40345): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 13:13:34] Arguments: --nthreads 10
[2025-04-18 13:13:34] Threads: 10
[2025-04-18 13:13:34] Checking for CVMFS
[2025-04-18 13:13:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 13:13:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 13:13:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 13:13:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 13:13:36] 2.11.2.0 4584 14019 189428 145009 2 254 10240950 18432000 5853 130560 0 14621335 99.519 22214207 50435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 13:13:36] CVMFS is ok
[2025-04-18 13:13:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 13:13:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 13:13:36] Further information can be found at the LHC@home message board.
[2025-04-18 13:13:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 13:13:36] Checking for apptainer binary...
[2025-04-18 13:13:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 13:13:36] Running /usr/bin/apptainer --version
[2025-04-18 13:13:36] apptainer version 1.3.2-1.el7
[2025-04-18 13:13:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 13:13:45] c-211-26.aglt2.org
[2025-04-18 13:13:45] apptainer works
[2025-04-18 13:13:45] Set ATHENA_PROC_NUMBER=10
[2025-04-18 13:13:45] Set ATHENA_CORE_NUMBER=10
[2025-04-18 13:13:46] Starting ATLAS job with PandaID=6606554157
[2025-04-18 13:13:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 21:21:39]  *** The last 200 lines of the pilot log: ***
[2025-04-18 21:21:39] 2025-04-19 01:21:20,912 | INFO     | mean x: 1745011018.5074627
[2025-04-18 21:21:39] 2025-04-19 01:21:20,913 | INFO     | mean y: 2542496.5031982944
[2025-04-18 21:21:39] 2025-04-19 01:21:20,913 | INFO     | -- intersect: -18195599851.354633
[2025-04-18 21:21:39] 2025-04-19 01:21:20,913 | INFO     | intersect: -18195599851.354633
[2025-04-18 21:21:39] 2025-04-19 01:21:20,914 | INFO     | chi2: 8.17605835934457
[2025-04-18 21:21:39] 2025-04-19 01:21:20,914 | INFO     | current chi2=8.17605835934457 (change=8.840057499204876 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,914 | INFO     | right removable region: 468
[2025-04-18 21:21:39] 2025-04-19 01:21:20,915 | INFO     | sum of square deviations: 31988485091.223934
[2025-04-18 21:21:39] 2025-04-19 01:21:20,922 | INFO     | sum of deviations: 145636551471.67172
[2025-04-18 21:21:39] 2025-04-19 01:21:20,922 | INFO     | mean x: 1745011323.5074627
[2025-04-18 21:21:39] 2025-04-19 01:21:20,922 | INFO     | mean y: 2561293.5223880596
[2025-04-18 21:21:39] 2025-04-19 01:21:20,922 | INFO     | -- intersect: -7942092250.085633
[2025-04-18 21:21:39] 2025-04-19 01:21:20,922 | INFO     | intersect: -7942092250.085633
[2025-04-18 21:21:39] 2025-04-19 01:21:20,923 | INFO     | chi2: 4.902602706254186
[2025-04-18 21:21:39] 2025-04-19 01:21:20,923 | INFO     | current chi2=4.902602706254186 (change=45.33784359604285 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,924 | INFO     | sum of square deviations: 30976188869.92239
[2025-04-18 21:21:39] 2025-04-19 01:21:20,930 | INFO     | sum of deviations: 39546482111.19835
[2025-04-18 21:21:39] 2025-04-19 01:21:20,930 | INFO     | mean x: 1745011476.012931
[2025-04-18 21:21:39] 2025-04-19 01:21:20,930 | INFO     | mean y: 2577270.6336206896
[2025-04-18 21:21:39] 2025-04-19 01:21:20,931 | INFO     | -- intersect: -2225232787.271482
[2025-04-18 21:21:39] 2025-04-19 01:21:20,931 | INFO     | intersect: -2225232787.271482
[2025-04-18 21:21:39] 2025-04-19 01:21:20,932 | INFO     | chi2: 3.1252711391334542
[2025-04-18 21:21:39] 2025-04-19 01:21:20,932 | INFO     | current chi2=3.1252711391334542 (change=36.25281658767522 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,933 | INFO     | sum of square deviations: 29985474448.592552
[2025-04-18 21:21:39] 2025-04-19 01:21:20,938 | INFO     | sum of deviations: -53462769774.48146
[2025-04-18 21:21:39] 2025-04-19 01:21:20,939 | INFO     | mean x: 1745011628.5185184
[2025-04-18 21:21:39] 2025-04-19 01:21:20,939 | INFO     | mean y: 2591587.9978213506
[2025-04-18 21:21:39] 2025-04-19 01:21:20,939 | INFO     | -- intersect: 3113869854.053654
[2025-04-18 21:21:39] 2025-04-19 01:21:20,939 | INFO     | intersect: 3113869854.053654
[2025-04-18 21:21:39] 2025-04-19 01:21:20,940 | INFO     | chi2: 1.7652654909365613
[2025-04-18 21:21:39] 2025-04-19 01:21:20,940 | INFO     | current chi2=1.7652654909365613 (change=43.516405062185505 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,941 | INFO     | sum of square deviations: 29016109264.733658
[2025-04-18 21:21:39] 2025-04-19 01:21:20,946 | INFO     | sum of deviations: -107726683653.68285
[2025-04-18 21:21:39] 2025-04-19 01:21:20,947 | INFO     | mean x: 1745011781.024229
[2025-04-18 21:21:39] 2025-04-19 01:21:20,947 | INFO     | mean y: 2600104.334801762
[2025-04-18 21:21:39] 2025-04-19 01:21:20,947 | INFO     | -- intersect: 6481219632.240427
[2025-04-18 21:21:39] 2025-04-19 01:21:20,947 | INFO     | intersect: 6481219632.240427
[2025-04-18 21:21:39] 2025-04-19 01:21:20,948 | INFO     | chi2: 1.206766453813621
[2025-04-18 21:21:39] 2025-04-19 01:21:20,948 | INFO     | current chi2=1.206766453813621 (change=31.638245917707753 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,949 | INFO     | sum of square deviations: 28067860755.844128
[2025-04-18 21:21:39] 2025-04-19 01:21:20,955 | INFO     | sum of deviations: -123582111579.8508
[2025-04-18 21:21:39] 2025-04-19 01:21:20,955 | INFO     | mean x: 1745011933.5300667
[2025-04-18 21:21:39] 2025-04-19 01:21:20,955 | INFO     | mean y: 2602650.692650334
[2025-04-18 21:21:39] 2025-04-19 01:21:20,955 | INFO     | -- intersect: 7685847959.396202
[2025-04-18 21:21:39] 2025-04-19 01:21:20,955 | INFO     | intersect: 7685847959.396202
[2025-04-18 21:21:39] 2025-04-19 01:21:20,956 | INFO     | chi2: 1.1470226046466767
[2025-04-18 21:21:39] 2025-04-19 01:21:20,956 | INFO     | current chi2=1.1470226046466767 (change=4.950738312135028 %)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,957 | INFO     | left removable region: 50
[2025-04-18 21:21:39] 2025-04-19 01:21:20,957 | INFO     | sum of square deviations: 22646030228.98832
[2025-04-18 21:21:39] 2025-04-19 01:21:20,962 | INFO     | sum of deviations: -15469285867.47143
[2025-04-18 21:21:39] 2025-04-19 01:21:20,963 | INFO     | mean x: 1745012513.069378
[2025-04-18 21:21:39] 2025-04-19 01:21:20,963 | INFO     | mean y: 2594781.533492823
[2025-04-18 21:21:39] 2025-04-19 01:21:20,963 | INFO     | -- intersect: 1194596078.6275334
[2025-04-18 21:21:39] 2025-04-19 01:21:20,963 | INFO     | intersect: 1194596078.6275334
[2025-04-18 21:21:39] 2025-04-19 01:21:20,964 | INFO     | chi2: 0.15755110160437658
[2025-04-18 21:21:39] 2025-04-19 01:21:20,964 | INFO     | -- intersect: 1194596078.6275334
[2025-04-18 21:21:39] 2025-04-19 01:21:20,964 | INFO     | current memory leak: -0.68 B/s (using 418 data points, chi2=0.16)
[2025-04-18 21:21:39] 2025-04-19 01:21:20,965 | INFO     | ..............................
[2025-04-18 21:21:39] 2025-04-19 01:21:20,965 | INFO     | . Timing measurements:
[2025-04-18 21:21:39] 2025-04-19 01:21:20,965 | INFO     | . get job = 0 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,965 | INFO     | . initial setup = 5 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | . payload setup = 63 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | . stage-in = 0 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | . payload execution = 28960 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | . stage-out = 4 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | . log creation = 0 s
[2025-04-18 21:21:39] 2025-04-19 01:21:20,966 | INFO     | ..............................
[2025-04-18 21:21:39] 2025-04-19 01:21:21,110 | INFO     | 
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | job summary report
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | --------------------------------------------------
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | PanDA job id: 6606554157
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | task id: 44075483
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | errors: (none)
[2025-04-18 21:21:39] 2025-04-19 01:21:21,111 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | pilot state: finished 
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | transexitcode: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | exeerrorcode: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | exeerrordiag: 
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | exitcode: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | exitmsg: OK
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | cpuconsumptiontime: 81754 s
[2025-04-18 21:21:39] 2025-04-19 01:21:21,112 | INFO     | nevents: 400
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | neventsw: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | pid: 8763
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | pgrp: 8763
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | corecount: 10
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | event service: False
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | sizes: {0: 2426546, 1: 2426801, 2: 2426801, 13: 2426829, 23: 2426885, 34: 2426913, 36: 2427275, 45: 2427303, 29028: 2463707, 29033: 2472648, 29034: 2472704, 29072:
[2025-04-18 21:21:39] 2025-04-19 01:21:21,113 | INFO     | --------------------------------------------------
[2025-04-18 21:21:39] 2025-04-19 01:21:21,114 | INFO     | 
[2025-04-18 21:21:39] 2025-04-19 01:21:21,114 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 21:21:39] 2025-04-19 01:21:21,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 21:21:39] 2025-04-19 01:21:21,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 21:21:39] 2025-04-19 01:21:21,216 | INFO     | job 6606554157 has completed (purged errors)
[2025-04-18 21:21:39] 2025-04-19 01:21:21,216 | INFO     | overall cleanup function is called
[2025-04-18 21:21:39] 2025-04-19 01:21:22,226 | INFO     | --- collectZombieJob: --- 10, [8763]
[2025-04-18 21:21:39] 2025-04-19 01:21:22,226 | INFO     | zombie collector waiting for pid 8763
[2025-04-18 21:21:39] 2025-04-19 01:21:22,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 21:21:39] 2025-04-19 01:21:22,227 | INFO     | collected zombie processes
[2025-04-18 21:21:39] 2025-04-19 01:21:22,227 | INFO     | will attempt to kill all subprocesses of pid=8763
[2025-04-18 21:21:39] 2025-04-19 01:21:22,626 | INFO     | process IDs to be killed: [8763] (in reverse order)
[2025-04-18 21:21:39] 2025-04-19 01:21:23,095 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 21:21:39] 2025-04-19 01:21:23,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 21:21:39] 2025-04-19 01:21:23,104 | INFO     | did not find any defunct processes belonging to 8763
[2025-04-18 21:21:39] 2025-04-19 01:21:23,113 | INFO     | did not find any defunct processes belonging to 8763
[2025-04-18 21:21:39] 2025-04-19 01:21:23,113 | INFO     | ready for new job
[2025-04-18 21:21:39] 2025-04-19 01:21:23,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 21:21:39] 2025-04-19 01:21:23,116 | INFO     | **************************************
[2025-04-18 21:21:39] 2025-04-19 01:21:23,117 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 21:21:39] 2025-04-19 01:21:23,117 | INFO     | **************************************
[2025-04-18 21:21:39] 2025-04-19 01:21:23,117 | INFO     | 
[2025-04-18 21:21:39] 2025-04-19 01:21:23,119 | INFO     | architecture information:
[2025-04-18 21:21:39] 2025-04-19 01:21:23,127 | INFO     | executing command: cat /etc/os-release
[2025-04-18 21:21:39] 2025-04-19 01:21:23,257 | INFO     | cat /etc/os-release:
[2025-04-18 21:21:39] NAME="CentOS Linux"
[2025-04-18 21:21:39] VERSION="7 (Core)"
[2025-04-18 21:21:39] ID="centos"
[2025-04-18 21:21:39] ID_LIKE="rhel fedora"
[2025-04-18 21:21:39] VERSION_ID="7"
[2025-04-18 21:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 21:21:39] ANSI_COLOR="0;31"
[2025-04-18 21:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 21:21:39] HOME_URL="https://www.centos.org/"
[2025-04-18 21:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 21:21:39] 
[2025-04-18 21:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 21:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 21:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 21:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 21:21:39] 
[2025-04-18 21:21:39] 2025-04-19 01:21:23,257 | INFO     | **************************************
[2025-04-18 21:21:39] 2025-04-19 01:21:23,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 21:21:39] 2025-04-19 01:21:23,886 | INFO     | sufficient remaining disk space (57242812416 B)
[2025-04-18 21:21:39] 2025-04-19 01:21:23,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 21:21:39] 2025-04-19 01:21:23,887 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 21:21:39] 2025-04-19 01:21:23,887 | INFO     | update_server=False
[2025-04-18 21:21:39] 2025-04-19 01:21:23,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 21:21:39] 2025-04-19 01:21:23,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 21:21:39] 2025-04-19 01:21:23,888 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 21:21:39] 2025-04-19 01:21:23,888 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 21:21:39] 2025-04-19 01:21:23,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 21:21:39] 2025-04-19 01:21:23,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 21:21:39] 2025-04-19 01:21:24,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:21:39] 2025-04-19 01:21:24,020 | INFO     | aborting loop
[2025-04-18 21:21:39] 2025-04-19 01:21:24,201 | INFO     | all payload control threads have been joined
[2025-04-18 21:21:39] 2025-04-19 01:21:24,278 | INFO     | all job control threads have been joined
[2025-04-18 21:21:39] 2025-04-19 01:21:24,580 | INFO     | all data control threads have been joined
[2025-04-18 21:21:39] 2025-04-19 01:21:24,893 | INFO     | [job] retrieve thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:24,919 | INFO     | [payload] validate_post thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,026 | INFO     | [job] job monitor thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,175 | INFO     | [job] validate thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,207 | INFO     | [payload] control thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,221 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,231 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,284 | INFO     | [job] control thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,312 | INFO     | [payload] failed_post thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 21:21:39] 2025-04-19 01:21:25,586 | INFO     | [data] control thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,691 | INFO     | [data] copytool_in thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:25,894 | INFO     | [data] copytool_out thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:26,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:21:39] 2025-04-19 01:21:26,281 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:27,133 | INFO     | [job] queue monitor thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:29,331 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 21:21:39] 2025-04-19 01:21:31,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896522401600)>', '<ExcThread(monitor, started 139895943198464)>']
[2025-04-18 21:21:39] 2025-04-19 01:21:31,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 21:21:39] 2025-04-19 01:21:31,956 | INFO     | [monitor] control thread has ended
[2025-04-18 21:21:39] 2025-04-19 01:21:36,330 | INFO     | all workflow threads have been joined
[2025-04-18 21:21:39] 2025-04-19 01:21:36,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 21:21:39] 2025-04-19 01:21:36,330 | INFO     | traces error code: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:36,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 21:21:39] 2025-04-19 01:21:36,726 [wrapper] ==== pilot stdout END ====
[2025-04-18 21:21:39] 2025-04-19 01:21:36,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 21:21:39] 2025-04-19 01:21:36,752 [wrapper] pilotpid: 46076
[2025-04-18 21:21:39] 2025-04-19 01:21:36,755 [wrapper] Pilot exit status: 0
[2025-04-18 21:21:39] 2025-04-19 01:21:36,904 [wrapper] pandaids: 6606554157
[2025-04-18 21:21:39] 2025-04-19 01:21:37,441 [wrapper] cleanup supervisor_pilot 30226 46078
[2025-04-18 21:21:39] 2025-04-19 01:21:37,478 [wrapper] Test setup, not cleaning
[2025-04-18 21:21:39] 2025-04-19 01:21:37,483 [wrapper] apfmon messages muted
[2025-04-18 21:21:39] 2025-04-19 01:21:37,486 [wrapper] ==== wrapper stdout END ====
[2025-04-18 21:21:39] 2025-04-19 01:21:37,488 [wrapper] ==== wrapper stderr END ====
[2025-04-18 21:21:39]  *** Error codes and diagnostics ***
[2025-04-18 21:21:39]     "exeErrorCode": 0,
[2025-04-18 21:21:39]     "exeErrorDiag": "",
[2025-04-18 21:21:39]     "pilotErrorCode": 0,
[2025-04-18 21:21:39]     "pilotErrorDiag": "",
[2025-04-18 21:21:39]  *** Listing of results directory ***
[2025-04-18 21:21:39] total 419852
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 09:46 pilot3.tar.gz
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 10:07 queuedata.json
[2025-04-18 21:21:39] -rwx------ 1 boincer umatlas     37140 Apr 18 10:07 runpilot2-wrapper.sh
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas       100 Apr 18 13:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 21:21:39] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 13:13 run_atlas
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas       105 Apr 18 13:13 job.xml
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas 224255192 Apr 18 13:13 EVNT.44075481._002721.pool.root.1
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:13 start_atlas.sh
[2025-04-18 21:21:39] drwxrwx--x 2 boincer umatlas      4096 Apr 18 13:13 shared
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 13:13 input.tar.gz
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas         0 Apr 18 13:13 boinc_lockfile
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 13:13 pandaJob.out
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas       467 Apr 18 13:14 setup.sh.local
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas    990596 Apr 18 13:15 agis_schedconf.cvmfs.json
[2025-04-18 21:21:39] drwx------ 4 boincer umatlas      4096 Apr 18 13:15 pilot3
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas 195935077 Apr 18 21:19 HITS.44075483._070045.pool.root.1
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas       530 Apr 18 21:19 boinc_task_state.xml
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas      1058 Apr 18 21:20 memory_monitor_summary.json
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas   1618536 Apr 18 21:20 agis_ddmendpoints.agis.ALL.json
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas    550872 Apr 18 21:20 log.44075483._070045.job.log.tgz.1
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas      6035 Apr 18 21:20 init_data.xml
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas        95 Apr 18 21:21 pilot_heartbeat.json
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas      7749 Apr 18 21:21 heartbeat.json
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas        28 Apr 18 21:21 wrapper_checkpoint.txt
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 21:21 boinc_mmap_file
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas      4476 Apr 18 21:21 pilotlog.txt
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas   2387206 Apr 18 21:21 log.44075483._070045.job.log.1
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas       357 Apr 18 21:21 output.list
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas       620 Apr 18 21:21 runtime_log
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas   2959360 Apr 18 21:21 result.tar.gz
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas     11421 Apr 18 21:21 runtime_log.err
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas       662 Apr 18 21:21 59MMDmkY1P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRRfLDmW6Econ.diag
[2025-04-18 21:21:39] -rw-r--r-- 1 boincer umatlas     20877 Apr 18 21:21 stderr.txt
[2025-04-18 21:21:39] HITS file was successfully produced:
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas 195935077 Apr 18 21:19 shared/HITS.pool.root.1
[2025-04-18 21:21:39]  *** Contents of shared directory: ***
[2025-04-18 21:21:39] total 413760
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas 224255192 Apr 18 13:13 ATLAS.root_0
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:13 start_atlas.sh
[2025-04-18 21:21:39] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 13:13 input.tar.gz
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas 195935077 Apr 18 21:19 HITS.pool.root.1
[2025-04-18 21:21:39] -rw------- 1 boincer umatlas   2959360 Apr 18 21:21 result.tar.gz
21:21:41 (40345): run_atlas exited; CPU time 82397.278593
21:21:41 (40345): called boinc_finish(0)

</stderr_txt>
]]>

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