Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 13:06:31 (19320): Detected: vboxwrapper 26206
2025-04-18 13:06:31 (19320): Detected: BOINC client v8.0.2
2025-04-18 13:06:33 (19320): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-18 13:06:33 (19320): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 13:06:34 (19320): Create VM. (boinc_7be35e6303dfabba, slot#5)
2025-04-18 13:06:34 (19320): Setting Memory Size for VM. (4800MB)
2025-04-18 13:06:35 (19320): Setting CPU Count for VM. (8)
2025-04-18 13:06:35 (19320): Setting Chipset Options for VM.
2025-04-18 13:06:35 (19320): Setting Graphics Controller Options for VM.
2025-04-18 13:06:35 (19320): Setting Boot Options for VM.
2025-04-18 13:06:36 (19320): Setting Network Configuration for NAT.
2025-04-18 13:06:36 (19320): Enabling VM Network Access.
2025-04-18 13:06:36 (19320): Disabling USB Support for VM.
2025-04-18 13:06:37 (19320): Disabling COM Port Support for VM.
2025-04-18 13:06:37 (19320): Disabling LPT Port Support for VM.
2025-04-18 13:06:37 (19320): Disabling Audio Support for VM.
2025-04-18 13:06:38 (19320): Disabling Clipboard Support for VM.
2025-04-18 13:06:38 (19320): Disabling Drag and Drop Support for VM.
2025-04-18 13:06:38 (19320): Adding storage controller(s) to VM.
2025-04-18 13:06:38 (19320): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 13:06:42 (19320): Adding VirtualBox Guest Additions to VM.
2025-04-18 13:06:43 (19320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 13:06:43 (19320): forwarding host port 55943 to guest port 80
2025-04-18 13:06:44 (19320): Enabling remote desktop for VM.
2025-04-18 13:06:44 (19320): Required extension pack not installed, remote desktop not enabled.
2025-04-18 13:06:44 (19320): Enabling shared directory for VM.
2025-04-18 13:06:45 (19320): Starting VM using VBoxManage interface. (boinc_7be35e6303dfabba, slot#5)
2025-04-18 13:06:55 (19320): Successfully started VM. (PID = '16516')
2025-04-18 13:06:55 (19320): Reporting VM Process ID to BOINC.
2025-04-18 13:06:55 (19320): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-18 13:06:55 (19320): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 13:06:55 (19320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 13:06:55 (19320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 13:06:55 (19320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 13:06:55 (19320): Detected: Web Application Enabled (http://localhost:55943)
2025-04-18 13:06:55 (19320): Preference change detected
2025-04-18 13:06:55 (19320): Setting CPU throttle for VM. (90%)
2025-04-18 13:06:55 (19320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 13:06:57 (19320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 13:06:57 (19320): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 13:07:01 (19320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 13:07:01 (19320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 13:07:01 (19320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 13:07:09 (19320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 13:07:09 (19320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 13:07:20 (19320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000259 main     Log opened 2025-04-18T13:07:18.246028000Z
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000533 main     OS Product: Linux
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000586 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000623 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000661 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000662 main     Process ID: 1370
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.000663 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 13:07:20 (19320): Guest Log: 00:00:00.002059 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 13:07:20 (19320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 13:07:20 (19320): Guest Log: [INFO] Mounting shared directory
2025-04-18 13:07:20 (19320): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 13:07:22 (19320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 13:07:22 (19320): Guest Log: [INFO] Detected branch: prod
2025-04-18 13:07:23 (19320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 13:07:23 (19320): Guest Log: Copying input files
2025-04-18 13:07:25 (19320): Guest Log: Copied input files into RunAtlas.
2025-04-18 13:07:25 (19320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 13:07:25 (19320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 13:07:25 (19320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 13:07:25 (19320): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 13:07:30 (19320): Guest Log: 00:00:10.011070 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 507 488 000ns (GuestNow=1 744 996 049 758 639 000 ns GuestLast=1 744 981 638 251 151 000 ns fSetTimeLastLoop=true )
2025-04-18 13:07:33 (19320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 13:07:33 (19320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 13:07:33 (19320): Guest Log: 2.6.3.0 1651 0 32036 145009 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 13:07:34 (19320): Guest Log: copied the webapp to /var/www
2025-04-18 13:07:34 (19320): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 13:07:34 (19320): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 13:07:35 (19320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 13:07:35 (19320): Guest Log:  *** Starting ATLAS job. (PandaID=6606554140 taskID=44075483) ***
2025-04-18 13:11:51 (19320): Guest Log:  *** Job finished ***
2025-04-18 13:11:51 (19320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:41,921 | INFO     | [payload] execute_payloads thread has finished
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:42,088 | INFO     | [data] copytool_in thread has finished
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:43,761 | INFO     | [data] queue_monitor thread has finished
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:44,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520748914496)>', '<ExcThread(monitor, started 140520147887872)>']
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:44,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:44,747 | INFO     | [monitor] control thread has ended
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,487 | INFO     | all workflow threads have been joined
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,487 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,487 | INFO     | traces error code: 0
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,541 [wrapper] ==== pilot stdout END ====
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,545 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,549 [wrapper] pilotpid: 5991
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,553 [wrapper] Pilot exit status: 0
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,634 [wrapper] pandaids: 6606554140
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,664 [wrapper] cleanup supervisor_pilot  5997 5992
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,670 [wrapper] Test setup, not cleaning
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,674 [wrapper] apfmon messages muted
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,678 [wrapper] ==== wrapper stdout END ====
2025-04-18 13:11:51 (19320): Guest Log: 2025-04-18 17:11:49,683 [wrapper] ==== wrapper stderr END ====
2025-04-18 13:11:51 (19320): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 13:11:51 (19320): Guest Log:     "exeErrorCode": 65,
2025-04-18 13:11:51 (19320): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-18 13:11:51 (19320): Guest Log:     "pilotErrorCode": 1305,
2025-04-18 13:11:51 (19320): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-18 13:11:51 (19320): Guest Log:  *** Listing of results directory ***
2025-04-18 13:11:51 (19320): Guest Log: total 3892
2025-04-18 13:11:51 (19320): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 18 13:46 pilot3.tar.gz
2025-04-18 13:11:51 (19320): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 18 14:00 queuedata.json
2025-04-18 13:11:51 (19320): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 18 14:01 runpilot2-wrapper.sh
2025-04-18 13:11:51 (19320): Guest Log: -rwxr-xr-x. 1 atlas atlas    9259 Apr 18 17:07 init_data.xml
2025-04-18 13:11:51 (19320): Guest Log: -rwxr-xr-x. 1 atlas atlas  508892 Apr 18 17:07 input.tar.gz
2025-04-18 13:11:51 (19320): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 18 17:07 start_atlas.sh
2025-04-18 13:11:51 (19320): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 18 17:07 EVNT.44075481._002720.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 13:11:51 (19320): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 18 17:07 pandaJob.out
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas     424 Apr 18 17:07 setup.sh.local
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas  990596 Apr 18 17:08 agis_schedconf.cvmfs.json
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 18 17:08 agis_ddmendpoints.agis.ALL.json
2025-04-18 13:11:51 (19320): Guest Log: drwx------. 4 atlas atlas    4096 Apr 18 17:08 pilot3
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas     953 Apr 18 17:09 memory_monitor_summary.json
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas   19775 Apr 18 17:09 log.44075483._070028.job.log.tgz.1
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas      95 Apr 18 17:11 pilot_heartbeat.json
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas    8338 Apr 18 17:11 heartbeat.json
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 18 17:11 pilotlog.txt
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas   75862 Apr 18 17:11 log.44075483._070028.job.log.1
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas     188 Apr 18 17:11 output.list
2025-04-18 13:11:51 (19320): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 18 17:11 runtime_log
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas  112640 Apr 18 17:11 result.tar.gz
2025-04-18 13:11:51 (19320): Guest Log: -rw-r--r--. 1 atlas atlas   10827 Apr 18 17:11 runtime_log.err
2025-04-18 13:11:51 (19320): Guest Log: -rw-------. 1 atlas atlas     655 Apr 18 17:11 EEcMDmiS1P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmME5KDmhvqItn.diag
2025-04-18 13:11:51 (19320): Guest Log: Looking for outputfile HITS.44075483._070028.pool.root.1
2025-04-18 13:11:51 (19320): Guest Log: No HITS file was produced
2025-04-18 13:11:51 (19320): Guest Log: Successfully finished the ATLAS job!
2025-04-18 13:11:51 (19320): Guest Log: Copying the results back to the shared directory!
2025-04-18 13:11:51 (19320): Guest Log:  *** Contents of shared directory: ***
2025-04-18 13:11:52 (19320): Guest Log: total 217984
2025-04-18 13:11:52 (19320): Guest Log: -rwxrwxrwx. 1 root root 222555554 Apr 18 17:06 ATLAS.root_0
2025-04-18 13:11:52 (19320): Guest Log: -rwxrwxrwx. 1 root root      9259 Apr 18 17:06 init_data.xml
2025-04-18 13:11:52 (19320): Guest Log: -rwxrwxrwx. 1 root root    508892 Apr 18 17:06 input.tar.gz
2025-04-18 13:11:52 (19320): Guest Log: -rwxrwxrwx. 1 root root    112640 Apr 18 17:11 result.tar.gz
2025-04-18 13:11:52 (19320): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 17:06 start_atlas.sh
2025-04-18 13:11:52 (19320): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 13:11:52 (19320): VM Completion File Detected.
2025-04-18 13:11:52 (19320): Powering off VM.
2025-04-18 13:11:53 (19320): Successfully stopped VM.
2025-04-18 13:11:53 (19320): Deregistering VM. (boinc_7be35e6303dfabba, slot#5)
2025-04-18 13:11:53 (19320): Removing network bandwidth throttle group from VM.
2025-04-18 13:11:53 (19320): Removing VM from VirtualBox.
13:11:58 (19320): called boinc_finish(0)

</stderr_txt>
]]>

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