Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:09:20 (8973): wrapper (7.7.26015): starting
13:09:20 (8973): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 13:09:20] Arguments: --nthreads 12
[2025-04-18 13:09:20] Threads: 12
[2025-04-18 13:09:20] Checking for CVMFS
[2025-04-18 13:09:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 13:09:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 13:09:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 13:09:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 13:09:21] 2.11.2.0 3078 57521 148960 145009 3 58 18578349 20275201 1 130560 0 24620782 99.985 7137095 58461 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 13:09:21] CVMFS is ok
[2025-04-18 13:09:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 13:09:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 13:09:21] Further information can be found at the LHC@home message board.
[2025-04-18 13:09:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 13:09:21] Checking for apptainer binary...
[2025-04-18 13:09:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 13:09:21] Running /usr/bin/apptainer --version
[2025-04-18 13:09:21] apptainer version 1.3.2-1.el7
[2025-04-18 13:09:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 13:09:22] c-115-41.aglt2.org
[2025-04-18 13:09:22] apptainer works
[2025-04-18 13:09:22] Set ATHENA_PROC_NUMBER=12
[2025-04-18 13:09:22] Set ATHENA_CORE_NUMBER=12
[2025-04-18 13:09:22] Starting ATLAS job with PandaID=6603694774
[2025-04-18 13:09:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 14:25:29]  *** The last 200 lines of the pilot log: ***
[2025-04-18 14:25:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 14:25:29]  is_altstaged=None
[2025-04-18 14:25:29]  is_tar=False
[2025-04-18 14:25:29]  lfn=log.44075483._032449.job.log.tgz.1
[2025-04-18 14:25:29]  mtime=0
[2025-04-18 14:25:29]  protocol_id=None
[2025-04-18 14:25:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 14:25:29]  replicas=None
[2025-04-18 14:25:29]  scope=mc23_13p6TeV
[2025-04-18 14:25:29]  status=None
[2025-04-18 14:25:29]  status_code=0
[2025-04-18 14:25:29]  storage_token=
[2025-04-18 14:25:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603694774/log.44075483._032449.job.log.tgz.1
[2025-04-18 14:25:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/96/log.44075483._032449.job.log.tgz.1
[2025-04-18 14:25:29]  workdir=None
[2025-04-18 14:25:29] ]
[2025-04-18 14:25:29] 2025-04-18 18:25:01,199 | INFO     | transferring file log.44075483._032449.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603694774/log.44075483._032449.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 14:25:29] 2025-04-18 18:25:01,199 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603694774/log.44075483._032449.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._032449.job
[2025-04-18 14:25:29] 2025-04-18 18:25:01,221 | INFO     | adding to output.list: log.44075483._032449.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/96/log.44075483._032449.job.log.tg
[2025-04-18 14:25:29] 2025-04-18 18:25:01,222 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 14:25:29] 2025-04-18 18:25:01,222 | INFO     | summary of transferred files:
[2025-04-18 14:25:29] 2025-04-18 18:25:01,222 | INFO     |  -- lfn=log.44075483._032449.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 14:25:29] 2025-04-18 18:25:01,223 | INFO     | stage-out finished correctly
[2025-04-18 14:25:29] 2025-04-18 18:25:02,637 | INFO     | monitor loop #340: job 0:6603694774 is in state 'finished'
[2025-04-18 14:25:29] 2025-04-18 18:25:02,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 14:25:29] 2025-04-18 18:25:04,191 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 14:25:29] 2025-04-18 18:25:04,863 | INFO     | job 6603694774 has state=finished
[2025-04-18 14:25:29] 2025-04-18 18:25:04,863 | INFO     | preparing for final server update for job 6603694774 in state='finished'
[2025-04-18 14:25:29] 2025-04-18 18:25:04,864 | INFO     | this job has now completed (state=finished)
[2025-04-18 14:25:29] 2025-04-18 18:25:04,864 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 14:25:29] 2025-04-18 18:25:04,864 | INFO     | log transfer has been attempted: DONE
[2025-04-18 14:25:29] 2025-04-18 18:25:04,864 | INFO     | job 6603694774 has finished - writing final server update
[2025-04-18 14:25:29] 2025-04-18 18:25:04,865 | INFO     | total number of processed events: 400 (read)
[2025-04-18 14:25:29] 2025-04-18 18:25:04,867 | INFO     | executing command: lscpu
[2025-04-18 14:25:29] 2025-04-18 18:25:04,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 14:25:29] 2025-04-18 18:25:05,140 | INFO     | monitor loop #341: job 0:6603694774 is in state 'finished'
[2025-04-18 14:25:29] 2025-04-18 18:25:05,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 14:25:29] 2025-04-18 18:25:07,654 | INFO     | monitor loop #342: job 0:6603694774 is in state 'finished'
[2025-04-18 14:25:29] 2025-04-18 18:25:07,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,847 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 14:25:29] 2025-04-18 18:25:09,848 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603694774/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,849 | INFO     | extracted standard info from prmon json
[2025-04-18 14:25:29] 2025-04-18 18:25:09,849 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 14:25:29] 2025-04-18 18:25:09,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 14:25:29] 2025-04-18 18:25:09,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 14:25:29] 2025-04-18 18:25:09,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 14:25:29] 2025-04-18 18:25:09,853 | INFO     | fitting pss+swap vs Time
[2025-04-18 14:25:29] 2025-04-18 18:25:09,853 | INFO     | sum of square deviations: 93240818.0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,854 | INFO     | sum of deviations: 26205931962.000004
[2025-04-18 14:25:29] 2025-04-18 18:25:09,854 | INFO     | mean x: 1744998522.0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,854 | INFO     | mean y: 2568459.895522388
[2025-04-18 14:25:29] 2025-04-18 18:25:09,854 | INFO     | -- intersect: -490440496307.32446
[2025-04-18 14:25:29] 2025-04-18 18:25:09,854 | INFO     | intersect: -490440496307.32446
[2025-04-18 14:25:29] 2025-04-18 18:25:09,855 | INFO     | chi2: 2.3292733356243684
[2025-04-18 14:25:29] 2025-04-18 18:25:09,855 | INFO     | -- intersect: -490440496307.32446
[2025-04-18 14:25:29] 2025-04-18 18:25:09,855 | INFO     | current memory leak: 281.06 B/s (using 67 data points, chi2=2.33)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | ..............................
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | . Timing measurements:
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | . get job = 0 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | . initial setup = 2 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | . payload setup = 7 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,856 | INFO     | . stage-in = 0 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,857 | INFO     | . payload execution = 4498 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,857 | INFO     | . stage-out = 0 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,857 | INFO     | . log creation = 0 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,857 | INFO     | ..............................
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | 
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | job summary report
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | --------------------------------------------------
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | PanDA job id: 6603694774
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | task id: 44075483
[2025-04-18 14:25:29] 2025-04-18 18:25:09,935 | INFO     | errors: (none)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | pilot state: finished 
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | transexitcode: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | exeerrorcode: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | exeerrordiag: 
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | exitcode: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | exitmsg: OK
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | cpuconsumptiontime: 41507 s
[2025-04-18 14:25:29] 2025-04-18 18:25:09,936 | INFO     | nevents: 400
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | neventsw: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | pid: 19036
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | pgrp: 19036
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | corecount: 12
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | event service: False
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | sizes: {0: 2426823, 5: 2427029, 11: 2427085, 4509: 2453066, 4510: 2462007, 4513: 2462063, 4518: 2462361}
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | --------------------------------------------------
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | 
[2025-04-18 14:25:29] 2025-04-18 18:25:09,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 14:25:29] 2025-04-18 18:25:09,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,965 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 14:25:29] 2025-04-18 18:25:09,965 | INFO     | job 6603694774 has completed (purged errors)
[2025-04-18 14:25:29] 2025-04-18 18:25:09,965 | INFO     | overall cleanup function is called
[2025-04-18 14:25:29] 2025-04-18 18:25:10,973 | INFO     | --- collectZombieJob: --- 10, [19036]
[2025-04-18 14:25:29] 2025-04-18 18:25:10,973 | INFO     | zombie collector waiting for pid 19036
[2025-04-18 14:25:29] 2025-04-18 18:25:10,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 14:25:29] 2025-04-18 18:25:10,974 | INFO     | collected zombie processes
[2025-04-18 14:25:29] 2025-04-18 18:25:10,974 | INFO     | will attempt to kill all subprocesses of pid=19036
[2025-04-18 14:25:29] 2025-04-18 18:25:11,062 | INFO     | process IDs to be killed: [19036] (in reverse order)
[2025-04-18 14:25:29] 2025-04-18 18:25:11,117 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 14:25:29] 2025-04-18 18:25:11,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 14:25:29] 2025-04-18 18:25:11,121 | INFO     | did not find any defunct processes belonging to 19036
[2025-04-18 14:25:29] 2025-04-18 18:25:11,124 | INFO     | did not find any defunct processes belonging to 19036
[2025-04-18 14:25:29] 2025-04-18 18:25:11,125 | INFO     | ready for new job
[2025-04-18 14:25:29] 2025-04-18 18:25:11,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 14:25:29] 2025-04-18 18:25:11,126 | INFO     | **************************************
[2025-04-18 14:25:29] 2025-04-18 18:25:11,126 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 14:25:29] 2025-04-18 18:25:11,126 | INFO     | **************************************
[2025-04-18 14:25:29] 2025-04-18 18:25:11,127 | INFO     | 
[2025-04-18 14:25:29] 2025-04-18 18:25:11,127 | INFO     | architecture information:
[2025-04-18 14:25:29] 2025-04-18 18:25:11,128 | INFO     | executing command: cat /etc/os-release
[2025-04-18 14:25:29] 2025-04-18 18:25:11,144 | INFO     | cat /etc/os-release:
[2025-04-18 14:25:29] NAME="CentOS Linux"
[2025-04-18 14:25:29] VERSION="7 (Core)"
[2025-04-18 14:25:29] ID="centos"
[2025-04-18 14:25:29] ID_LIKE="rhel fedora"
[2025-04-18 14:25:29] VERSION_ID="7"
[2025-04-18 14:25:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 14:25:29] ANSI_COLOR="0;31"
[2025-04-18 14:25:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 14:25:29] HOME_URL="https://www.centos.org/"
[2025-04-18 14:25:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 14:25:29] 
[2025-04-18 14:25:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 14:25:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 14:25:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 14:25:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 14:25:29] 
[2025-04-18 14:25:29] 2025-04-18 18:25:11,144 | INFO     | **************************************
[2025-04-18 14:25:29] 2025-04-18 18:25:11,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 14:25:29] 2025-04-18 18:25:11,665 | INFO     | sufficient remaining disk space (18615369728 B)
[2025-04-18 14:25:29] 2025-04-18 18:25:11,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 14:25:29] 2025-04-18 18:25:11,666 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 14:25:29] 2025-04-18 18:25:11,666 | INFO     | update_server=False
[2025-04-18 14:25:29] 2025-04-18 18:25:11,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 14:25:29] 2025-04-18 18:25:11,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 14:25:29] 2025-04-18 18:25:11,667 | INFO     | aborting loop
[2025-04-18 14:25:29] 2025-04-18 18:25:11,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 14:25:29] 2025-04-18 18:25:11,667 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 14:25:29] 2025-04-18 18:25:11,668 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 14:25:29] 2025-04-18 18:25:11,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 14:25:29] 2025-04-18 18:25:11,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 14:25:29] 2025-04-18 18:25:11,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 14:25:29] 2025-04-18 18:25:11,961 | INFO     | all data control threads have been joined
[2025-04-18 14:25:29] 2025-04-18 18:25:12,254 | INFO     | all payload control threads have been joined
[2025-04-18 14:25:29] 2025-04-18 18:25:12,671 | INFO     | [job] retrieve thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:12,672 | INFO     | [job] job monitor thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:12,673 | INFO     | [job] queue monitor thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:12,734 | INFO     | [payload] validate_post thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:12,966 | INFO     | [data] control thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,005 | INFO     | [job] validate thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,090 | INFO     | all job control threads have been joined
[2025-04-18 14:25:29] 2025-04-18 18:25:13,259 | INFO     | [payload] control thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,268 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,389 | INFO     | [payload] failed_post thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,449 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,450 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,822 | INFO     | [data] copytool_out thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:13,904 | INFO     | [data] copytool_in thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:14,095 | INFO     | [job] control thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:14,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 14:25:29] 2025-04-18 18:25:18,782 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:22,352 | INFO     | job.realtimelogging is not enabled
[2025-04-18 14:25:29] 2025-04-18 18:25:23,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 14:25:29] 2025-04-18 18:25:24,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413077137216)>', '<ExcThread(monitor, started 140412203296512)>']
[2025-04-18 14:25:29] 2025-04-18 18:25:24,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 14:25:29] 2025-04-18 18:25:24,735 | INFO     | [monitor] control thread has ended
[2025-04-18 14:25:29] 2025-04-18 18:25:29,589 | INFO     | all workflow threads have been joined
[2025-04-18 14:25:29] 2025-04-18 18:25:29,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 14:25:29] 2025-04-18 18:25:29,595 | INFO     | traces error code: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:29,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 14:25:29] 2025-04-18 18:25:29,674 [wrapper] ==== pilot stdout END ====
[2025-04-18 14:25:29] 2025-04-18 18:25:29,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 14:25:29] 2025-04-18 18:25:29,682 [wrapper] pilotpid: 12576
[2025-04-18 14:25:29] 2025-04-18 18:25:29,685 [wrapper] Pilot exit status: 0
[2025-04-18 14:25:29] 2025-04-18 18:25:29,700 [wrapper] pandaids: 6603694774
[2025-04-18 14:25:29] 2025-04-18 18:25:29,736 [wrapper] cleanup supervisor_pilot 21999 12577
[2025-04-18 14:25:29] 2025-04-18 18:25:29,740 [wrapper] Test setup, not cleaning
[2025-04-18 14:25:29] 2025-04-18 18:25:29,744 [wrapper] apfmon messages muted
[2025-04-18 14:25:29] 2025-04-18 18:25:29,749 [wrapper] ==== wrapper stdout END ====
[2025-04-18 14:25:29] 2025-04-18 18:25:29,752 [wrapper] ==== wrapper stderr END ====
[2025-04-18 14:25:29]  *** Error codes and diagnostics ***
[2025-04-18 14:25:29]     "exeErrorCode": 0,
[2025-04-18 14:25:29]     "exeErrorDiag": "",
[2025-04-18 14:25:29]     "pilotErrorCode": 0,
[2025-04-18 14:25:29]     "pilotErrorDiag": "",
[2025-04-18 14:25:29]  *** Listing of results directory ***
[2025-04-18 14:25:29] total 414424
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 17:34 pilot3.tar.gz
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 17:45 queuedata.json
[2025-04-18 14:25:29] -rwx------ 1 boincer umatlas     37140 Apr 15 17:46 runpilot2-wrapper.sh
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas       100 Apr 18 13:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 14:25:29] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 13:09 run_atlas
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas       105 Apr 18 13:09 job.xml
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas 226664873 Apr 18 13:09 EVNT.44075481._001272.pool.root.1
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:09 start_atlas.sh
[2025-04-18 14:25:29] drwxrwx--x 2 boincer umatlas      4096 Apr 18 13:09 shared
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas    508897 Apr 18 13:09 input.tar.gz
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas         0 Apr 18 13:09 boinc_lockfile
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 13:09 pandaJob.out
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas       424 Apr 18 13:09 setup.sh.local
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas    990596 Apr 18 13:09 agis_schedconf.cvmfs.json
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas   1618536 Apr 18 13:09 agis_ddmendpoints.agis.ALL.json
[2025-04-18 14:25:29] drwx------ 4 boincer umatlas      4096 Apr 18 13:09 pilot3
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas      5869 Apr 18 14:21 init_data.xml
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas       529 Apr 18 14:24 boinc_task_state.xml
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas        95 Apr 18 14:24 pilot_heartbeat.json
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas 192266054 Apr 18 14:24 HITS.44075483._032449.pool.root.1
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas      1049 Apr 18 14:24 memory_monitor_summary.json
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas    355066 Apr 18 14:25 log.44075483._032449.job.log.tgz.1
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas      7750 Apr 18 14:25 heartbeat.json
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas        27 Apr 18 14:25 wrapper_checkpoint.txt
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 14:25 boinc_mmap_file
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas      4548 Apr 18 14:25 pilotlog.txt
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas    436508 Apr 18 14:25 log.44075483._032449.job.log.1
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas       357 Apr 18 14:25 output.list
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas       620 Apr 18 14:25 runtime_log
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas    808960 Apr 18 14:25 result.tar.gz
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas       658 Apr 18 14:25 TBANDmyH3O7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdr1KDmekk4Qm.diag
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 14:25 runtime_log.err
[2025-04-18 14:25:29] -rw-r--r-- 1 boincer umatlas     21336 Apr 18 14:25 stderr.txt
[2025-04-18 14:25:29] HITS file was successfully produced:
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas 192266054 Apr 18 14:24 shared/HITS.pool.root.1
[2025-04-18 14:25:29]  *** Contents of shared directory: ***
[2025-04-18 14:25:29] total 410428
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas 226664873 Apr 18 13:09 ATLAS.root_0
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 13:09 start_atlas.sh
[2025-04-18 14:25:29] -rw-r--r-- 2 boincer umatlas    508897 Apr 18 13:09 input.tar.gz
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas 192266054 Apr 18 14:24 HITS.pool.root.1
[2025-04-18 14:25:29] -rw------- 1 boincer umatlas    808960 Apr 18 14:25 result.tar.gz
14:25:31 (8973): run_atlas exited; CPU time 41518.286499
14:25:31 (8973): called boinc_finish(0)

</stderr_txt>
]]>

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