Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:04:26 (3789709): wrapper (7.7.26015): starting
19:04:26 (3789709): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 19:04:26] Arguments: --nthreads 12
[2025-04-18 19:04:26] Threads: 12
[2025-04-18 19:04:26] Checking for CVMFS
[2025-04-18 19:04:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 19:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 19:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 19:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 19:04:26] 2.12.6.0 4038419 10946 127448 145012 1 234 2216700 4096001 14205 130560 0 103058705 99.984 3196278 382 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-18 19:04:26] CVMFS is ok
[2025-04-18 19:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 19:04:26] Checking for apptainer binary...
[2025-04-18 19:04:26] apptainer is not installed, using version from CVMFS
[2025-04-18 19:04:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 19:04:26] epyc7v12
[2025-04-18 19:04:26] apptainer works
[2025-04-18 19:04:26] Set ATHENA_PROC_NUMBER=12
[2025-04-18 19:04:26] Set ATHENA_CORE_NUMBER=12
[2025-04-18 19:04:26] Starting ATLAS job with PandaID=6606239558
[2025-04-18 19:04:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 21:23:35]  *** The last 200 lines of the pilot log: ***
[2025-04-18 21:23:35] 2025-04-18 21:23:22,185 | INFO     | sum of square deviations: 697046395.725191
[2025-04-18 21:23:35] 2025-04-18 21:23:22,185 | INFO     | sum of deviations: 44656153172.816765
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | mean x: 1745007375.0458016
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | mean y: 2581358.0305343512
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | -- intersect: -111791005274.99197
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | intersect: -111791005274.99197
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | chi2: 2.201606038627826
[2025-04-18 21:23:35] 2025-04-18 21:23:22,186 | INFO     | current chi2=2.201606038627826 (change=56.582742609171476 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,187 | INFO     | sum of square deviations: 620233823.2142874
[2025-04-18 21:23:35] 2025-04-18 21:23:22,187 | INFO     | sum of deviations: 12979938071.952385
[2025-04-18 21:23:35] 2025-04-18 21:23:22,187 | INFO     | mean x: 1745007527.547619
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | mean y: 2644277.1746031744
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | -- intersect: -36515985947.27441
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | intersect: -36515985947.27441
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | chi2: 0.27861322711445713
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | current chi2=0.27861322711445713 (change=87.34500077551996 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | sum of square deviations: 549281825.7024808
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | sum of deviations: 1971586850.7603302
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | mean x: 1745007680.0495868
[2025-04-18 21:23:35] 2025-04-18 21:23:22,188 | INFO     | mean y: 2667692.2066115704
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | -- intersect: -6260845927.712556
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | intersect: -6260845927.712556
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | chi2: 0.002053336591730269
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | current chi2=0.002053336591730269 (change=99.26301539485533 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | sum of square deviations: 483957840.68965524
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | sum of deviations: 930361180.3103447
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | mean x: 1745007832.5517242
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | mean y: 2670109.6982758623
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | -- intersect: -3351935209.703301
[2025-04-18 21:23:35] 2025-04-18 21:23:22,189 | INFO     | intersect: -3351935209.703301
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | chi2: 0.0003040101331381829
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | current chi2=0.0003040101331381829 (change=85.1943351926532 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | sum of square deviations: 424029305.6756762
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | sum of deviations: 615819652.9729729
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | mean x: 1745007985.054054
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | mean y: 2670902.5045045046
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | -- intersect: -2531611981.737893
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | intersect: -2531611981.737893
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | chi2: 0.0001557495854367058
[2025-04-18 21:23:35] 2025-04-18 21:23:22,190 | INFO     | current chi2=0.0001557495854367058 (change=48.76829142865697 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | sum of square deviations: 369270184.2641514
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | sum of deviations: 445875596.86792463
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | mean x: 1745008137.54717
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | mean y: 2671374.7264150945
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | -- intersect: -2104340179.4792714
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | intersect: -2104340179.4792714
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | chi2: 0.00013077741574361713
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | current chi2=0.00013077741574361713 (change=16.033538466936697 %)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | left removable region: 60
[2025-04-18 21:23:35] 2025-04-18 21:23:22,191 | INFO     | sum of square deviations: 106331817.37142862
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | sum of deviations: -16997086.057142854
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | mean x: 1745008869.5428572
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | mean y: 2672943.685714286
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | -- intersect: 281611709.7042774
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | intersect: 281611709.7042774
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | chi2: 3.725189275956414e-05
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | -- intersect: 281611709.7042774
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | current memory leak: -0.16 B/s (using 70 data points, chi2=0.00)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | ..............................
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | . Timing measurements:
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | . get job = 0 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | . initial setup = 1 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,192 | INFO     | . payload setup = 6 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,193 | INFO     | . stage-in = 0 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,193 | INFO     | . payload execution = 8288 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,193 | INFO     | . stage-out = 0 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,193 | INFO     | . log creation = 0 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,193 | INFO     | ..............................
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | 
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | job summary report
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | --------------------------------------------------
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | PanDA job id: 6606239558
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | task id: 44075483
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | errors: (none)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | pilot state: finished 
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | transexitcode: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:22,253 | INFO     | exeerrorcode: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | exeerrordiag: 
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | exitcode: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | exitmsg: OK
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | cpuconsumptiontime: 47370 s
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | nevents: 400
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | neventsw: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | pid: 3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | pgrp: 3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | corecount: 12
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | event service: False
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | sizes: {0: 2426677, 1: 2426876, 6: 2427082, 11: 2427110, 8298: 2454940, 8299: 2463929, 8302: 2464141, 8309: 2464311}
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | --------------------------------------------------
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | 
[2025-04-18 21:23:35] 2025-04-18 21:23:22,254 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/21
[2025-04-18 21:23:35] 2025-04-18 21:23:22,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 21:23:35] 2025-04-18 21:23:22,279 | INFO     | job 6606239558 has completed (purged errors)
[2025-04-18 21:23:35] 2025-04-18 21:23:22,279 | INFO     | overall cleanup function is called
[2025-04-18 21:23:35] 2025-04-18 21:23:23,287 | INFO     | --- collectZombieJob: --- 10, [3817777]
[2025-04-18 21:23:35] 2025-04-18 21:23:23,287 | INFO     | zombie collector waiting for pid 3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:23,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 21:23:35] 2025-04-18 21:23:23,287 | INFO     | collected zombie processes
[2025-04-18 21:23:35] 2025-04-18 21:23:23,287 | INFO     | will attempt to kill all subprocesses of pid=3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:23,638 | INFO     | process IDs to be killed: [3817777] (in reverse order)
[2025-04-18 21:23:35] 2025-04-18 21:23:23,805 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 21:23:35] 2025-04-18 21:23:23,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 21:23:35] 2025-04-18 21:23:23,818 | INFO     | did not find any defunct processes belonging to 3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:23,828 | INFO     | did not find any defunct processes belonging to 3817777
[2025-04-18 21:23:35] 2025-04-18 21:23:23,828 | INFO     | ready for new job
[2025-04-18 21:23:35] 2025-04-18 21:23:23,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 21:23:35] 2025-04-18 21:23:23,829 | INFO     | **************************************
[2025-04-18 21:23:35] 2025-04-18 21:23:23,829 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 21:23:35] 2025-04-18 21:23:23,829 | INFO     | **************************************
[2025-04-18 21:23:35] 2025-04-18 21:23:23,829 | INFO     | 
[2025-04-18 21:23:35] 2025-04-18 21:23:23,857 | INFO     | architecture information:
[2025-04-18 21:23:35] 2025-04-18 21:23:23,858 | INFO     | executing command: cat /etc/os-release
[2025-04-18 21:23:35] 2025-04-18 21:23:23,876 | INFO     | cat /etc/os-release:
[2025-04-18 21:23:35] NAME="CentOS Linux"
[2025-04-18 21:23:35] VERSION="7 (Core)"
[2025-04-18 21:23:35] ID="centos"
[2025-04-18 21:23:35] ID_LIKE="rhel fedora"
[2025-04-18 21:23:35] VERSION_ID="7"
[2025-04-18 21:23:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 21:23:35] ANSI_COLOR="0;31"
[2025-04-18 21:23:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 21:23:35] HOME_URL="https://www.centos.org/"
[2025-04-18 21:23:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 21:23:35] 
[2025-04-18 21:23:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 21:23:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 21:23:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 21:23:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 21:23:35] 
[2025-04-18 21:23:35] 2025-04-18 21:23:23,877 | INFO     | **************************************
[2025-04-18 21:23:35] 2025-04-18 21:23:24,379 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/21
[2025-04-18 21:23:35] 2025-04-18 21:23:24,395 | INFO     | sufficient remaining disk space (312173658112 B)
[2025-04-18 21:23:35] 2025-04-18 21:23:24,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 21:23:35] 2025-04-18 21:23:24,396 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 21:23:35] 2025-04-18 21:23:24,396 | INFO     | update_server=False
[2025-04-18 21:23:35] 2025-04-18 21:23:24,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 21:23:35] 2025-04-18 21:23:24,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:23:35] 2025-04-18 21:23:24,396 | INFO     | aborting loop
[2025-04-18 21:23:35] 2025-04-18 21:23:24,478 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 21:23:35] 2025-04-18 21:23:24,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 21:23:35] 2025-04-18 21:23:24,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 21:23:35] 2025-04-18 21:23:24,481 | INFO     | all payload control threads have been joined
[2025-04-18 21:23:35] 2025-04-18 21:23:24,491 | INFO     | all data control threads have been joined
[2025-04-18 21:23:35] 2025-04-18 21:23:24,713 | INFO     | all job control threads have been joined
[2025-04-18 21:23:35] 2025-04-18 21:23:25,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 21:23:35] 2025-04-18 21:23:25,399 | INFO     | [job] retrieve thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,402 | INFO     | [job] job monitor thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,451 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,486 | INFO     | [payload] control thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,495 | INFO     | [data] control thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,719 | INFO     | [job] control thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:25,941 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,180 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 21:23:35] 2025-04-18 21:23:26,600 | INFO     | [payload] failed_post thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,608 | INFO     | [job] validate thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,871 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,883 | INFO     | [data] copytool_in thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:26,934 | INFO     | [payload] validate_post thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:27,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:23:35] 2025-04-18 21:23:27,371 | INFO     | [data] copytool_out thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:28,263 | INFO     | [job] queue monitor thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:30,219 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 21:23:35] 2025-04-18 21:23:30,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490940266304)>', '<ExcThread(monitor, started 140490510948096)>']
[2025-04-18 21:23:35] 2025-04-18 21:23:30,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 21:23:35] 2025-04-18 21:23:30,509 | INFO     | [monitor] control thread has ended
[2025-04-18 21:23:35] 2025-04-18 21:23:35,434 | INFO     | all workflow threads have been joined
[2025-04-18 21:23:35] 2025-04-18 21:23:35,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 21:23:35] 2025-04-18 21:23:35,434 | INFO     | traces error code: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:35,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 21:23:35] 2025-04-18 21:23:35,517 [wrapper] ==== pilot stdout END ====
[2025-04-18 21:23:35] 2025-04-18 21:23:35,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 21:23:35] 2025-04-18 21:23:35,525 [wrapper] pilotpid: 3799513
[2025-04-18 21:23:35] 2025-04-18 21:23:35,529 [wrapper] Pilot exit status: 0
[2025-04-18 21:23:35] 2025-04-18 21:23:35,540 [wrapper] pandaids: 6606239558
[2025-04-18 21:23:35] 2025-04-18 21:23:35,625 [wrapper] cleanup supervisor_pilot   88728 3799514
[2025-04-18 21:23:35] 2025-04-18 21:23:35,629 [wrapper] Test setup, not cleaning
[2025-04-18 21:23:35] 2025-04-18 21:23:35,632 [wrapper] apfmon messages muted
[2025-04-18 21:23:35] 2025-04-18 21:23:35,636 [wrapper] ==== wrapper stdout END ====
[2025-04-18 21:23:35] 2025-04-18 21:23:35,640 [wrapper] ==== wrapper stderr END ====
[2025-04-18 21:23:35]  *** Error codes and diagnostics ***
[2025-04-18 21:23:35]     "exeErrorCode": 0,
[2025-04-18 21:23:35]     "exeErrorDiag": "",
[2025-04-18 21:23:35]     "pilotErrorCode": 0,
[2025-04-18 21:23:35]     "pilotErrorDiag": "",
[2025-04-18 21:23:35]  *** Listing of results directory ***
[2025-04-18 21:23:35] total 424744
[2025-04-18 21:23:35] -rw-r--r-- 1 boinc boinc    495897 Apr 18 07:25 pilot3.tar.gz
[2025-04-18 21:23:35] -rw-r--r-- 1 boinc boinc      5111 Apr 18 07:27 queuedata.json
[2025-04-18 21:23:35] -rwx------ 1 boinc boinc     37140 Apr 18 07:27 runpilot2-wrapper.sh
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc       100 Apr 18 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 21:23:35] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 19:04 run_atlas
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc       105 Apr 18 19:04 job.xml
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc     17569 Apr 18 19:04 start_atlas.sh
[2025-04-18 21:23:35] drwxrwx--x 2 boinc boinc      4096 Apr 18 19:04 shared
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc    508895 Apr 18 19:04 input.tar.gz
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc      6942 Apr 18 19:04 init_data.xml
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc 226752632 Apr 18 19:04 EVNT.44075481._002566.pool.root.1
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc         0 Apr 18 19:04 boinc_lockfile
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc      2579 Apr 18 19:04 pandaJob.out
[2025-04-18 21:23:35] -rw------- 1 boinc boinc       424 Apr 18 19:04 setup.sh.local
[2025-04-18 21:23:35] -rw------- 1 boinc boinc    991292 Apr 18 19:04 agis_schedconf.cvmfs.json
[2025-04-18 21:23:35] -rw------- 1 boinc boinc   1618536 Apr 18 19:04 agis_ddmendpoints.agis.ALL.json
[2025-04-18 21:23:35] drwx------ 4 boinc boinc      4096 Apr 18 19:04 pilot3
[2025-04-18 21:23:35] -rw------- 1 boinc boinc 201980017 Apr 18 21:22 HITS.44075483._066051.pool.root.1
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc       530 Apr 18 21:22 boinc_task_state.xml
[2025-04-18 21:23:35] -rw------- 1 boinc boinc      1024 Apr 18 21:23 memory_monitor_summary.json
[2025-04-18 21:23:35] -rw------- 1 boinc boinc    409986 Apr 18 21:23 log.44075483._066051.job.log.tgz.1
[2025-04-18 21:23:35] -rw------- 1 boinc boinc        95 Apr 18 21:23 pilot_heartbeat.json
[2025-04-18 21:23:35] -rw------- 1 boinc boinc      7644 Apr 18 21:23 heartbeat.json
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc        27 Apr 18 21:23 wrapper_checkpoint.txt
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc      8192 Apr 18 21:23 boinc_mmap_file
[2025-04-18 21:23:35] -rw------- 1 boinc boinc      4378 Apr 18 21:23 pilotlog.txt
[2025-04-18 21:23:35] -rw------- 1 boinc boinc    755178 Apr 18 21:23 log.44075483._066051.job.log.1
[2025-04-18 21:23:35] -rw------- 1 boinc boinc       357 Apr 18 21:23 output.list
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc       620 Apr 18 21:23 runtime_log
[2025-04-18 21:23:35] -rw------- 1 boinc boinc   1187840 Apr 18 21:23 result.tar.gz
[2025-04-18 21:23:35] -rw------- 1 boinc boinc       652 Apr 18 21:23 w4uMDmZJvP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8jeLDmH6acYn.diag
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc     11427 Apr 18 21:23 runtime_log.err
[2025-04-18 21:23:35] -rw-rw-r-- 1 boinc boinc     20642 Apr 18 21:23 stderr.txt
[2025-04-18 21:23:35] HITS file was successfully produced:
[2025-04-18 21:23:35] -rw------- 1 boinc boinc 201980017 Apr 18 21:22 shared/HITS.pool.root.1
[2025-04-18 21:23:35]  *** Contents of shared directory: ***
[2025-04-18 21:23:35] total 420376
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc     17569 Apr 18 19:04 start_atlas.sh
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc    508895 Apr 18 19:04 input.tar.gz
[2025-04-18 21:23:35] -rw-r--r-- 2 boinc boinc 226752632 Apr 18 19:04 ATLAS.root_0
[2025-04-18 21:23:35] -rw------- 1 boinc boinc 201980017 Apr 18 21:22 HITS.pool.root.1
[2025-04-18 21:23:35] -rw------- 1 boinc boinc   1187840 Apr 18 21:23 result.tar.gz
21:23:37 (3789709): run_atlas exited; CPU time 47826.285578
21:23:37 (3789709): called boinc_finish(0)

</stderr_txt>
]]>

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