Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:39:46 (1440148): wrapper (7.7.26015): starting
04:39:46 (1440148): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 04:39:46] Arguments: --nthreads 4
[2025-04-19 04:39:46] Threads: 4
[2025-04-19 04:39:46] Checking for CVMFS
[2025-04-19 04:39:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:39:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:39:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:39:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:39:46] 2.9.2.0 2972 4033 94072 145023 2 56 23618810 36864000 0 130560 0 3223991 99.991 944616 13304 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 04:39:46] CVMFS is ok
[2025-04-19 04:39:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:39:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:39:46] Further information can be found at the LHC@home message board.
[2025-04-19 04:39:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:39:46] Checking for apptainer binary...
[2025-04-19 04:39:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:39:46] Running /usr/bin/apptainer --version
[2025-04-19 04:39:46] apptainer version 1.3.6-6.1
[2025-04-19 04:39:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:39:46] madmaxA277
[2025-04-19 04:39:46] apptainer works
[2025-04-19 04:39:46] Set ATHENA_PROC_NUMBER=4
[2025-04-19 04:39:46] Set ATHENA_CORE_NUMBER=4
[2025-04-19 04:39:46] Starting ATLAS job with PandaID=6606553471
[2025-04-19 04:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:00:57]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:00:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 06:00:57]  is_altstaged=None
[2025-04-19 06:00:57]  is_tar=False
[2025-04-19 06:00:57]  lfn=log.44075483._069786.job.log.tgz.1
[2025-04-19 06:00:57]  mtime=0
[2025-04-19 06:00:57]  protocol_id=None
[2025-04-19 06:00:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 06:00:57]  replicas=None
[2025-04-19 06:00:57]  scope=mc23_13p6TeV
[2025-04-19 06:00:57]  status=None
[2025-04-19 06:00:57]  status_code=0
[2025-04-19 06:00:57]  storage_token=
[2025-04-19 06:00:57]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606553471/log.44075483._069786.job.log.tgz.1
[2025-04-19 06:00:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/50/log.44075483._069786.job.log.tgz.1
[2025-04-19 06:00:57]  workdir=None
[2025-04-19 06:00:57] ]
[2025-04-19 06:00:57] 2025-04-19 04:00:34,041 | INFO     | transferring file log.44075483._069786.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606553471/log.44075483._069786.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 06:00:57] 2025-04-19 04:00:34,041 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606553471/log.44075483._069786.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0697
[2025-04-19 06:00:57] 2025-04-19 04:00:34,060 | INFO     | adding to output.list: log.44075483._069786.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/50/log.44075483._069786.job.log.tg
[2025-04-19 06:00:57] 2025-04-19 04:00:34,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 06:00:57] 2025-04-19 04:00:34,061 | INFO     | summary of transferred files:
[2025-04-19 06:00:57] 2025-04-19 04:00:34,061 | INFO     |  -- lfn=log.44075483._069786.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 06:00:57] 2025-04-19 04:00:34,061 | INFO     | stage-out finished correctly
[2025-04-19 06:00:57] 2025-04-19 04:00:37,360 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 06:00:57] 2025-04-19 04:00:39,299 | INFO     | job 6606553471 has state=finished
[2025-04-19 06:00:57] 2025-04-19 04:00:39,299 | INFO     | preparing for final server update for job 6606553471 in state='finished'
[2025-04-19 06:00:57] 2025-04-19 04:00:39,300 | INFO     | this job has now completed (state=finished)
[2025-04-19 06:00:57] 2025-04-19 04:00:39,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 06:00:57] 2025-04-19 04:00:39,300 | INFO     | log transfer has been attempted: DONE
[2025-04-19 06:00:57] 2025-04-19 04:00:39,300 | INFO     | job 6606553471 has finished - writing final server update
[2025-04-19 06:00:57] 2025-04-19 04:00:39,300 | INFO     | total number of processed events: 400 (read)
[2025-04-19 06:00:57] 2025-04-19 04:00:39,301 | INFO     | executing command: lscpu
[2025-04-19 06:00:57] 2025-04-19 04:00:39,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 06:00:57] 2025-04-19 04:00:40,174 | WARNING  | process 1450469 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 06:00:57] 2025-04-19 04:00:40,174 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606553471/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:00:57] 2025-04-19 04:00:40,247 | INFO     | number of running child processes to parent process 1450469: 1
[2025-04-19 06:00:57] 2025-04-19 04:00:40,247 | INFO     | maximum number of monitored processes: 6
[2025-04-19 06:00:57] 2025-04-19 04:00:41,862 | INFO     | PID=1443895 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 06:00:57] 2025-04-19 04:00:42,750 | INFO     | monitor loop #372: job 0:6606553471 is in state 'finished'
[2025-04-19 06:00:57] 2025-04-19 04:00:42,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,295 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 06:00:57] 2025-04-19 04:00:44,295 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606553471/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,296 | INFO     | extracted standard info from prmon json
[2025-04-19 06:00:57] 2025-04-19 04:00:44,296 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 06:00:57] 2025-04-19 04:00:44,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 06:00:57] 2025-04-19 04:00:44,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 06:00:57] 2025-04-19 04:00:44,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | fitting pss+swap vs Time
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | sum of square deviations: 115715658.0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | sum of deviations: 532619608.99999946
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | mean x: 1745032888.5
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | mean y: 2466164.222222222
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | -- intersect: -8029625177.858809
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | intersect: -8029625177.858809
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | chi2: 1.2089568507141488
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | -- intersect: -8029625177.858809
[2025-04-19 06:00:57] 2025-04-19 04:00:44,297 | INFO     | current memory leak: 4.60 B/s (using 72 data points, chi2=1.21)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | ..............................
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . Timing measurements:
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . get job = 0 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . initial setup = 1 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . payload setup = 4 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . stage-in = 0 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . payload execution = 4817 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . stage-out = 0 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | . log creation = 0 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,298 | INFO     | ..............................
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | 
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | job summary report
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | --------------------------------------------------
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | PanDA job id: 6606553471
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | task id: 44075483
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | errors: (none)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | pilot state: finished 
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | transexitcode: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | exeerrorcode: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | exeerrordiag: 
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | exitcode: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | exitmsg: OK
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | cpuconsumptiontime: 16506 s
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | nevents: 400
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | neventsw: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | pid: 1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | pgrp: 1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | corecount: 4
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | event service: False
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | sizes: {0: 2426770, 4: 2426976, 11: 2427004, 4825: 2462213, 4829: 2462213, 4836: 2462383}
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | --------------------------------------------------
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | 
[2025-04-19 06:00:57] 2025-04-19 04:00:44,340 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | job 6606553471 has completed (purged errors)
[2025-04-19 06:00:57] 2025-04-19 04:00:44,361 | INFO     | overall cleanup function is called
[2025-04-19 06:00:57] 2025-04-19 04:00:45,367 | INFO     | --- collectZombieJob: --- 10, [1450469]
[2025-04-19 06:00:57] 2025-04-19 04:00:45,368 | INFO     | zombie collector waiting for pid 1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:45,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:00:57] 2025-04-19 04:00:45,368 | INFO     | collected zombie processes
[2025-04-19 06:00:57] 2025-04-19 04:00:45,368 | INFO     | will attempt to kill all subprocesses of pid=1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:45,424 | INFO     | process IDs to be killed: [1450469] (in reverse order)
[2025-04-19 06:00:57] 2025-04-19 04:00:45,462 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:00:57] 2025-04-19 04:00:45,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:00:57] 2025-04-19 04:00:45,465 | INFO     | did not find any defunct processes belonging to 1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:45,467 | INFO     | did not find any defunct processes belonging to 1450469
[2025-04-19 06:00:57] 2025-04-19 04:00:45,467 | INFO     | ready for new job
[2025-04-19 06:00:57] 2025-04-19 04:00:45,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:00:57] 2025-04-19 04:00:45,467 | INFO     | **************************************
[2025-04-19 06:00:57] 2025-04-19 04:00:45,468 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:00:57] 2025-04-19 04:00:45,468 | INFO     | **************************************
[2025-04-19 06:00:57] 2025-04-19 04:00:45,468 | INFO     | 
[2025-04-19 06:00:57] 2025-04-19 04:00:45,468 | INFO     | architecture information:
[2025-04-19 06:00:57] 2025-04-19 04:00:45,468 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:00:57] 2025-04-19 04:00:45,483 | INFO     | cat /etc/os-release:
[2025-04-19 06:00:57] NAME="CentOS Linux"
[2025-04-19 06:00:57] VERSION="7 (Core)"
[2025-04-19 06:00:57] ID="centos"
[2025-04-19 06:00:57] ID_LIKE="rhel fedora"
[2025-04-19 06:00:57] VERSION_ID="7"
[2025-04-19 06:00:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:00:57] ANSI_COLOR="0;31"
[2025-04-19 06:00:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:00:57] HOME_URL="https://www.centos.org/"
[2025-04-19 06:00:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:00:57] 
[2025-04-19 06:00:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:00:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:00:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:00:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:00:57] 
[2025-04-19 06:00:57] 2025-04-19 04:00:45,483 | INFO     | **************************************
[2025-04-19 06:00:57] 2025-04-19 04:00:45,986 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | INFO     | sufficient remaining disk space (331688706048 B)
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | INFO     | update_server=False
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:00:57] 2025-04-19 04:00:46,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:00:57] 2025-04-19 04:00:46,006 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:00:57] 2025-04-19 04:00:46,006 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:00:57] 2025-04-19 04:00:46,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:00:57] 2025-04-19 04:00:46,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:00:57] 2025-04-19 04:00:46,132 | INFO     | all data control threads have been joined
[2025-04-19 06:00:57] 2025-04-19 04:00:46,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:00:57] 2025-04-19 04:00:46,260 | INFO     | aborting loop
[2025-04-19 06:00:57] 2025-04-19 04:00:46,607 | INFO     | all job control threads have been joined
[2025-04-19 06:00:57] 2025-04-19 04:00:47,011 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,011 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:00:57] 2025-04-19 04:00:47,138 | INFO     | [data] control thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,158 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,266 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,350 | INFO     | all payload control threads have been joined
[2025-04-19 06:00:57] 2025-04-19 04:00:47,504 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,613 | INFO     | [job] control thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,857 | INFO     | [job] validate thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,909 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:47,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:00:57] 2025-04-19 04:00:48,009 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:48,063 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:48,155 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:48,356 | INFO     | [payload] control thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:48,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:49,128 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:51,921 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:00:57] 2025-04-19 04:00:52,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407575979840)>', '<ExcThread(monitor, started 140406499043072)>']
[2025-04-19 06:00:57] 2025-04-19 04:00:53,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:00:57] 2025-04-19 04:00:53,041 | INFO     | [monitor] control thread has ended
[2025-04-19 06:00:57] 2025-04-19 04:00:57,442 | INFO     | all workflow threads have been joined
[2025-04-19 06:00:57] 2025-04-19 04:00:57,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:00:57] 2025-04-19 04:00:57,443 | INFO     | traces error code: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:57,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:00:57] 2025-04-19 04:00:57,527 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:00:57] 2025-04-19 04:00:57,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:00:57] 2025-04-19 04:00:57,536 [wrapper] pilotpid: 1443895
[2025-04-19 06:00:57] 2025-04-19 04:00:57,540 [wrapper] Pilot exit status: 0
[2025-04-19 06:00:57] 2025-04-19 04:00:57,553 [wrapper] pandaids: 6606553471
[2025-04-19 06:00:57] 2025-04-19 04:00:57,578 [wrapper] cleanup supervisor_pilot 1466001 1443896
[2025-04-19 06:00:57] 2025-04-19 04:00:57,582 [wrapper] Test setup, not cleaning
[2025-04-19 06:00:57] 2025-04-19 04:00:57,586 [wrapper] apfmon messages muted
[2025-04-19 06:00:57] 2025-04-19 04:00:57,590 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:00:57] 2025-04-19 04:00:57,595 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:00:57]  *** Error codes and diagnostics ***
[2025-04-19 06:00:57]     "exeErrorCode": 0,
[2025-04-19 06:00:57]     "exeErrorDiag": "",
[2025-04-19 06:00:57]     "pilotErrorCode": 0,
[2025-04-19 06:00:57]     "pilotErrorDiag": "",
[2025-04-19 06:00:57]  *** Listing of results directory ***
[2025-04-19 06:00:57] total 409424
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc      5111 Apr 18 15:30 queuedata.json
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc    495897 Apr 18 15:30 pilot3.tar.gz
[2025-04-19 06:00:57] -rwx------ 1 boinc boinc     37140 Apr 18 15:31 runpilot2-wrapper.sh
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc       100 Apr 19 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:00:57] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 04:39 run_atlas
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc       105 Apr 19 04:39 job.xml
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc 221170266 Apr 19 04:39 EVNT.44075481._002711.pool.root.1
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc      6856 Apr 19 04:39 init_data.xml
[2025-04-19 06:00:57] drwxrwx--x 2 boinc boinc      4096 Apr 19 04:39 shared
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc    508893 Apr 19 04:39 input.tar.gz
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:39 start_atlas.sh
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc         0 Apr 19 04:39 boinc_lockfile
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc      2575 Apr 19 04:39 pandaJob.out
[2025-04-19 06:00:57] -rw------- 1 boinc boinc       424 Apr 19 04:39 setup.sh.local
[2025-04-19 06:00:57] -rw------- 1 boinc boinc    991292 Apr 19 04:39 agis_schedconf.cvmfs.json
[2025-04-19 06:00:57] -rw------- 1 boinc boinc   1618536 Apr 19 04:39 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:00:57] drwx------ 4 boinc boinc      4096 Apr 19 04:39 pilot3
[2025-04-19 06:00:57] -rw------- 1 boinc boinc 192811106 Apr 19 06:00 HITS.44075483._069786.pool.root.1
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc       529 Apr 19 06:00 boinc_task_state.xml
[2025-04-19 06:00:57] -rw------- 1 boinc boinc        95 Apr 19 06:00 pilot_heartbeat.json
[2025-04-19 06:00:57] -rw------- 1 boinc boinc      1021 Apr 19 06:00 memory_monitor_summary.json
[2025-04-19 06:00:57] -rw------- 1 boinc boinc    227669 Apr 19 06:00 log.44075483._069786.job.log.tgz.1
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc      8192 Apr 19 06:00 boinc_mmap_file
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc        27 Apr 19 06:00 wrapper_checkpoint.txt
[2025-04-19 06:00:57] -rw------- 1 boinc boinc      7667 Apr 19 06:00 heartbeat.json
[2025-04-19 06:00:57] -rw------- 1 boinc boinc      4480 Apr 19 06:00 pilotlog.txt
[2025-04-19 06:00:57] -rw------- 1 boinc boinc    472864 Apr 19 06:00 log.44075483._069786.job.log.1
[2025-04-19 06:00:57] -rw------- 1 boinc boinc       357 Apr 19 06:00 output.list
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc       620 Apr 19 06:00 runtime_log
[2025-04-19 06:00:57] -rw------- 1 boinc boinc    716800 Apr 19 06:00 result.tar.gz
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc     11119 Apr 19 06:00 runtime_log.err
[2025-04-19 06:00:57] -rw------- 1 boinc boinc       662 Apr 19 06:00 LPjMDmWz0P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmhC5KDmkXtq5n.diag
[2025-04-19 06:00:57] -rw-r--r-- 1 boinc boinc     21470 Apr 19 06:00 stderr.txt
[2025-04-19 06:00:57] HITS file was successfully produced:
[2025-04-19 06:00:57] -rw------- 1 boinc boinc 192811106 Apr 19 06:00 shared/HITS.pool.root.1
[2025-04-19 06:00:57]  *** Contents of shared directory: ***
[2025-04-19 06:00:57] total 405512
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc 221170266 Apr 19 04:39 ATLAS.root_0
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc    508893 Apr 19 04:39 input.tar.gz
[2025-04-19 06:00:57] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:39 start_atlas.sh
[2025-04-19 06:00:57] -rw------- 1 boinc boinc 192811106 Apr 19 06:00 HITS.pool.root.1
[2025-04-19 06:00:57] -rw------- 1 boinc boinc    716800 Apr 19 06:00 result.tar.gz
06:01:19 (1440148): run_atlas exited; CPU time 16527.526287
06:01:19 (1440148): called boinc_finish(0)

</stderr_txt>
]]>

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