Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:48 (28634): wrapper (7.7.26015): starting
12:19:48 (28634): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 12:19:48] Arguments: --nthreads 12
[2025-04-18 12:19:48] Threads: 12
[2025-04-18 12:19:48] Checking for CVMFS
[2025-04-18 12:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 12:19:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 12:19:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 12:19:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 12:19:48] 2.11.2.0 2994 217483 166324 145009 1 55 10815438 20275201 1 130560 0 23466839 99.950 8099967 49400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 12:19:48] CVMFS is ok
[2025-04-18 12:19:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 12:19:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 12:19:48] Further information can be found at the LHC@home message board.
[2025-04-18 12:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 12:19:48] Checking for apptainer binary...
[2025-04-18 12:19:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 12:19:48] Running /usr/bin/apptainer --version
[2025-04-18 12:19:48] apptainer version 1.3.2-1.el7
[2025-04-18 12:19:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 12:19:50] c-205-21.aglt2.org
[2025-04-18 12:19:50] apptainer works
[2025-04-18 12:19:50] Set ATHENA_PROC_NUMBER=12
[2025-04-18 12:19:50] Set ATHENA_CORE_NUMBER=12
[2025-04-18 12:19:50] Starting ATLAS job with PandaID=6606508773
[2025-04-18 12:19:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 13:42:27]  *** The last 200 lines of the pilot log: ***
[2025-04-18 13:42:28] ]
[2025-04-18 13:42:28] 2025-04-18 17:41:58,141 | INFO     | transferring file log.44075483._069450.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/log.44075483._069450.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 13:42:28] 2025-04-18 17:41:58,142 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/log.44075483._069450.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._069450.job
[2025-04-18 13:42:28] 2025-04-18 17:41:58,163 | INFO     | adding to output.list: log.44075483._069450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/93/log.44075483._069450.job.log.tg
[2025-04-18 13:42:28] 2025-04-18 17:41:58,164 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 13:42:28] 2025-04-18 17:41:58,164 | INFO     | summary of transferred files:
[2025-04-18 13:42:28] 2025-04-18 17:41:58,164 | INFO     |  -- lfn=log.44075483._069450.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 13:42:28] 2025-04-18 17:41:58,165 | INFO     | stage-out finished correctly
[2025-04-18 13:42:28] 2025-04-18 17:42:00,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 13:42:28] 2025-04-18 17:42:01,916 | WARNING  | process 8186 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 13:42:28] 2025-04-18 17:42:01,916 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,917 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,918 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3881826 B
[2025-04-18 13:42:28] 2025-04-18 17:42:01,918 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16269 B
[2025-04-18 13:42:28] 2025-04-18 17:42:01,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 13:42:28] 2025-04-18 17:42:01,934 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,934 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,935 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6606508773: 4183105 B (within 2537553920 B limit)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,936 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6606508773/HITS.44075483._069450.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,936 | INFO     | total size of present files: 0 B (workdir size: 4183105 B)
[2025-04-18 13:42:28] 2025-04-18 17:42:01,936 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/HITS.44075483._069450.pool.root.1 since it does not exist
[2025-04-18 13:42:28] 2025-04-18 17:42:02,030 | INFO     | number of running child processes to parent process 8186: 1
[2025-04-18 13:42:28] 2025-04-18 17:42:02,030 | INFO     | maximum number of monitored processes: 6
[2025-04-18 13:42:28] 2025-04-18 17:42:02,535 | INFO     | job 6606508773 has state=finished
[2025-04-18 13:42:28] 2025-04-18 17:42:02,535 | INFO     | preparing for final server update for job 6606508773 in state='finished'
[2025-04-18 13:42:28] 2025-04-18 17:42:02,536 | INFO     | this job has now completed (state=finished)
[2025-04-18 13:42:28] 2025-04-18 17:42:02,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 13:42:28] 2025-04-18 17:42:02,536 | INFO     | log transfer has been attempted: DONE
[2025-04-18 13:42:28] 2025-04-18 17:42:02,536 | INFO     | job 6606508773 has finished - writing final server update
[2025-04-18 13:42:28] 2025-04-18 17:42:02,536 | INFO     | total number of processed events: 400 (read)
[2025-04-18 13:42:28] 2025-04-18 17:42:02,538 | INFO     | executing command: lscpu
[2025-04-18 13:42:28] 2025-04-18 17:42:02,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 13:42:28] 2025-04-18 17:42:04,533 | INFO     | monitor loop #367: job 0:6606508773 is in state 'finished'
[2025-04-18 13:42:28] 2025-04-18 17:42:04,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,034 | INFO     | monitor loop #368: job 0:6606508773 is in state 'finished'
[2025-04-18 13:42:28] 2025-04-18 17:42:07,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,264 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 13:42:28] 2025-04-18 17:42:07,264 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606508773/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,265 | INFO     | extracted standard info from prmon json
[2025-04-18 13:42:28] 2025-04-18 17:42:07,265 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 13:42:28] 2025-04-18 17:42:07,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 13:42:28] 2025-04-18 17:42:07,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 13:42:28] 2025-04-18 17:42:07,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 13:42:28] 2025-04-18 17:42:07,268 | INFO     | fitting pss+swap vs Time
[2025-04-18 13:42:28] 2025-04-18 17:42:07,269 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 13:42:28] 2025-04-18 17:42:07,269 | INFO     | sum of deviations: 18257509382.5
[2025-04-18 13:42:28] 2025-04-18 17:42:07,270 | INFO     | mean x: 1744995764.5
[2025-04-18 13:42:28] 2025-04-18 17:42:07,270 | INFO     | mean y: 2658987.581081081
[2025-04-18 13:42:28] 2025-04-18 17:42:07,270 | INFO     | -- intersect: -253592899190.7799
[2025-04-18 13:42:28] 2025-04-18 17:42:07,270 | INFO     | intersect: -253592899190.7799
[2025-04-18 13:42:28] 2025-04-18 17:42:07,271 | INFO     | chi2: 2.4068007899870016
[2025-04-18 13:42:28] 2025-04-18 17:42:07,271 | INFO     | -- intersect: -253592899190.7799
[2025-04-18 13:42:28] 2025-04-18 17:42:07,271 | INFO     | current memory leak: 145.33 B/s (using 74 data points, chi2=2.41)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,272 | INFO     | ..............................
[2025-04-18 13:42:28] 2025-04-18 17:42:07,272 | INFO     | . Timing measurements:
[2025-04-18 13:42:28] 2025-04-18 17:42:07,272 | INFO     | . get job = 0 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,272 | INFO     | . initial setup = 2 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | . payload setup = 7 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | . stage-in = 0 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | . payload execution = 4886 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | . stage-out = 0 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | . log creation = 0 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,273 | INFO     | ..............................
[2025-04-18 13:42:28] 2025-04-18 17:42:07,409 | INFO     | PID=32266 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,711 | INFO     | 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,711 | INFO     | job summary report
[2025-04-18 13:42:28] 2025-04-18 17:42:07,725 | INFO     | --------------------------------------------------
[2025-04-18 13:42:28] 2025-04-18 17:42:07,725 | INFO     | PanDA job id: 6606508773
[2025-04-18 13:42:28] 2025-04-18 17:42:07,725 | INFO     | task id: 44075483
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | errors: (none)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | pilot state: finished 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | transexitcode: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | exeerrorcode: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:07,726 | INFO     | exeerrordiag: 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | exitcode: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | exitmsg: OK
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | cpuconsumptiontime: 45972 s
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | nevents: 400
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | neventsw: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | pid: 8186
[2025-04-18 13:42:28] 2025-04-18 17:42:07,727 | INFO     | pgrp: 8186
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | corecount: 12
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | event service: False
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | sizes: {0: 2426773, 1: 2426773, 5: 2427007, 11: 2427063, 4897: 2453156, 4898: 2462280, 4901: 2462280, 4908: 2462478}
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | --------------------------------------------------
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | 
[2025-04-18 13:42:28] 2025-04-18 17:42:07,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 13:42:28] 2025-04-18 17:42:07,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,753 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 13:42:28] 2025-04-18 17:42:07,756 | INFO     | job 6606508773 has completed (purged errors)
[2025-04-18 13:42:28] 2025-04-18 17:42:07,756 | INFO     | overall cleanup function is called
[2025-04-18 13:42:28] 2025-04-18 17:42:08,765 | INFO     | --- collectZombieJob: --- 10, [8186]
[2025-04-18 13:42:28] 2025-04-18 17:42:08,765 | INFO     | zombie collector waiting for pid 8186
[2025-04-18 13:42:28] 2025-04-18 17:42:08,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 13:42:28] 2025-04-18 17:42:08,765 | INFO     | collected zombie processes
[2025-04-18 13:42:28] 2025-04-18 17:42:08,765 | INFO     | will attempt to kill all subprocesses of pid=8186
[2025-04-18 13:42:28] 2025-04-18 17:42:08,858 | INFO     | process IDs to be killed: [8186] (in reverse order)
[2025-04-18 13:42:28] 2025-04-18 17:42:08,911 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 13:42:28] 2025-04-18 17:42:08,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 13:42:28] 2025-04-18 17:42:08,915 | INFO     | did not find any defunct processes belonging to 8186
[2025-04-18 13:42:28] 2025-04-18 17:42:08,918 | INFO     | did not find any defunct processes belonging to 8186
[2025-04-18 13:42:28] 2025-04-18 17:42:08,918 | INFO     | ready for new job
[2025-04-18 13:42:28] 2025-04-18 17:42:08,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 13:42:28] 2025-04-18 17:42:08,920 | INFO     | **************************************
[2025-04-18 13:42:28] 2025-04-18 17:42:08,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 13:42:28] 2025-04-18 17:42:08,920 | INFO     | **************************************
[2025-04-18 13:42:28] 2025-04-18 17:42:08,920 | INFO     | 
[2025-04-18 13:42:28] 2025-04-18 17:42:08,921 | INFO     | architecture information:
[2025-04-18 13:42:28] 2025-04-18 17:42:08,922 | INFO     | executing command: cat /etc/os-release
[2025-04-18 13:42:28] 2025-04-18 17:42:08,937 | INFO     | cat /etc/os-release:
[2025-04-18 13:42:28] NAME="CentOS Linux"
[2025-04-18 13:42:28] VERSION="7 (Core)"
[2025-04-18 13:42:28] ID="centos"
[2025-04-18 13:42:28] ID_LIKE="rhel fedora"
[2025-04-18 13:42:28] VERSION_ID="7"
[2025-04-18 13:42:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 13:42:28] ANSI_COLOR="0;31"
[2025-04-18 13:42:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 13:42:28] HOME_URL="https://www.centos.org/"
[2025-04-18 13:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 13:42:28] 
[2025-04-18 13:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 13:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 13:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 13:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 13:42:28] 
[2025-04-18 13:42:28] 2025-04-18 17:42:08,938 | INFO     | **************************************
[2025-04-18 13:42:28] 2025-04-18 17:42:09,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 13:42:28] 2025-04-18 17:42:09,459 | INFO     | sufficient remaining disk space (29389488128 B)
[2025-04-18 13:42:28] 2025-04-18 17:42:09,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 13:42:28] 2025-04-18 17:42:09,459 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 13:42:28] 2025-04-18 17:42:09,459 | INFO     | update_server=False
[2025-04-18 13:42:28] 2025-04-18 17:42:09,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 13:42:28] 2025-04-18 17:42:09,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 13:42:28] 2025-04-18 17:42:09,460 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 13:42:28] 2025-04-18 17:42:09,461 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 13:42:28] 2025-04-18 17:42:09,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 13:42:28] 2025-04-18 17:42:09,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 13:42:28] 2025-04-18 17:42:09,536 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 13:42:28] 2025-04-18 17:42:09,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 13:42:28] 2025-04-18 17:42:09,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:42:28] 2025-04-18 17:42:09,537 | INFO     | will abort loop
[2025-04-18 13:42:28] 2025-04-18 17:42:09,571 | INFO     | all data control threads have been joined
[2025-04-18 13:42:28] 2025-04-18 17:42:10,465 | INFO     | [job] retrieve thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:10,540 | INFO     | [job] job monitor thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:10,576 | INFO     | [data] control thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:10,639 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:10,640 | INFO     | [payload] failed_post thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:10,641 | INFO     | all payload control threads have been joined
[2025-04-18 13:42:28] 2025-04-18 17:42:11,050 | INFO     | [data] copytool_in thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,160 | INFO     | all job control threads have been joined
[2025-04-18 13:42:28] 2025-04-18 17:42:11,221 | INFO     | [payload] validate_post thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,465 | INFO     | [data] copytool_out thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 13:42:28] 2025-04-18 17:42:11,646 | INFO     | [payload] control thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,654 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,656 | INFO     | [job] validate thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:11,806 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:12,166 | INFO     | [job] control thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:12,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:42:28] 2025-04-18 17:42:13,373 | INFO     | [job] queue monitor thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:15,495 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:20,366 | INFO     | job.realtimelogging is not enabled
[2025-04-18 13:42:28] 2025-04-18 17:42:21,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 13:42:28] 2025-04-18 17:42:22,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134582269760)>', '<ExcThread(monitor, started 140133676332800)>']
[2025-04-18 13:42:28] 2025-04-18 17:42:23,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 13:42:28] 2025-04-18 17:42:23,528 | INFO     | [monitor] control thread has ended
[2025-04-18 13:42:28] 2025-04-18 17:42:27,711 | INFO     | all workflow threads have been joined
[2025-04-18 13:42:28] 2025-04-18 17:42:27,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 13:42:28] 2025-04-18 17:42:27,711 | INFO     | traces error code: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:27,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 13:42:28] 2025-04-18 17:42:27,800 [wrapper] ==== pilot stdout END ====
[2025-04-18 13:42:28] 2025-04-18 17:42:27,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 13:42:28] 2025-04-18 17:42:27,808 [wrapper] pilotpid: 32266
[2025-04-18 13:42:28] 2025-04-18 17:42:27,812 [wrapper] Pilot exit status: 0
[2025-04-18 13:42:28] 2025-04-18 17:42:27,827 [wrapper] pandaids: 6606508773
[2025-04-18 13:42:28] 2025-04-18 17:42:27,862 [wrapper] cleanup supervisor_pilot 31567 32267
[2025-04-18 13:42:28] 2025-04-18 17:42:27,866 [wrapper] Test setup, not cleaning
[2025-04-18 13:42:28] 2025-04-18 17:42:27,870 [wrapper] apfmon messages muted
[2025-04-18 13:42:28] 2025-04-18 17:42:27,874 [wrapper] ==== wrapper stdout END ====
[2025-04-18 13:42:28] 2025-04-18 17:42:27,878 [wrapper] ==== wrapper stderr END ====
[2025-04-18 13:42:28]  *** Error codes and diagnostics ***
[2025-04-18 13:42:28]     "exeErrorCode": 0,
[2025-04-18 13:42:28]     "exeErrorDiag": "",
[2025-04-18 13:42:28]     "pilotErrorCode": 0,
[2025-04-18 13:42:28]     "pilotErrorDiag": "",
[2025-04-18 13:42:28]  *** Listing of results directory ***
[2025-04-18 13:42:28] total 418960
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 08:26 pilot3.tar.gz
[2025-04-18 13:42:28] -rwx------ 1 boincer umatlas     37140 Apr 18 08:57 runpilot2-wrapper.sh
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 08:57 queuedata.json
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas       100 Apr 18 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 13:42:28] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 12:19 run_atlas
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas       105 Apr 18 12:19 job.xml
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 12:19 input.tar.gz
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas 222724801 Apr 18 12:19 EVNT.44075481._002698.pool.root.1
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 12:19 start_atlas.sh
[2025-04-18 13:42:28] drwxrwx--x 2 boincer umatlas      4096 Apr 18 12:19 shared
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas         0 Apr 18 12:19 boinc_lockfile
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 12:19 pandaJob.out
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas       424 Apr 18 12:19 setup.sh.local
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas    990596 Apr 18 12:20 agis_schedconf.cvmfs.json
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas   1618536 Apr 18 12:20 agis_ddmendpoints.agis.ALL.json
[2025-04-18 13:42:28] drwx------ 4 boincer umatlas      4096 Apr 18 12:20 pilot3
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 13:40 init_data.xml
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas 200768497 Apr 18 13:41 HITS.44075483._069450.pool.root.1
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas       529 Apr 18 13:41 boinc_task_state.xml
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas      1048 Apr 18 13:41 memory_monitor_summary.json
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas    357440 Apr 18 13:41 log.44075483._069450.job.log.tgz.1
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 13:42 boinc_mmap_file
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas        95 Apr 18 13:42 pilot_heartbeat.json
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas        27 Apr 18 13:42 wrapper_checkpoint.txt
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas      7747 Apr 18 13:42 heartbeat.json
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas      4734 Apr 18 13:42 pilotlog.txt
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas    468036 Apr 18 13:42 log.44075483._069450.job.log.1
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas       357 Apr 18 13:42 output.list
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas       620 Apr 18 13:42 runtime_log
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas    849920 Apr 18 13:42 result.tar.gz
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas       658 Apr 18 13:42 Z9ELDmDT0P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQB5KDmwUZ9Po.diag
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 13:42 runtime_log.err
[2025-04-18 13:42:28] -rw-r--r-- 1 boincer umatlas     22632 Apr 18 13:42 stderr.txt
[2025-04-18 13:42:28] HITS file was successfully produced:
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas 200768497 Apr 18 13:41 shared/HITS.pool.root.1
[2025-04-18 13:42:28]  *** Contents of shared directory: ***
[2025-04-18 13:42:28] total 414928
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 12:19 input.tar.gz
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas 222724801 Apr 18 12:19 ATLAS.root_0
[2025-04-18 13:42:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 12:19 start_atlas.sh
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas 200768497 Apr 18 13:41 HITS.pool.root.1
[2025-04-18 13:42:28] -rw------- 1 boincer umatlas    849920 Apr 18 13:42 result.tar.gz
13:42:29 (28634): run_atlas exited; CPU time 45960.116854
13:42:29 (28634): called boinc_finish(0)

</stderr_txt>
]]>

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