Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:46:31 (1107462): wrapper (7.7.26015): starting
03:46:31 (1107462): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 03:46:31] Arguments: --nthreads 4
[2025-04-19 03:46:31] Threads: 4
[2025-04-19 03:46:31] Checking for CVMFS
[2025-04-19 03:46:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:46:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:46:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:46:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:46:32] 2.9.2.0 1878138 10418 99172 145021 0 56 25605709 36864001 0 130560 0 8444668 99.993 2295724 9241 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 03:46:32] CVMFS is ok
[2025-04-19 03:46:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:46:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:46:32] Further information can be found at the LHC@home message board.
[2025-04-19 03:46:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:46:32] Checking for apptainer binary...
[2025-04-19 03:46:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:46:32] Running /usr/bin/apptainer --version
[2025-04-19 03:46:32] apptainer version 1.3.6-6.1
[2025-04-19 03:46:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:46:32] thA309
[2025-04-19 03:46:32] apptainer works
[2025-04-19 03:46:32] Set ATHENA_PROC_NUMBER=4
[2025-04-19 03:46:32] Set ATHENA_CORE_NUMBER=4
[2025-04-19 03:46:32] Starting ATLAS job with PandaID=6606461231
[2025-04-19 03:46:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:03:39]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:03:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 05:03:39]  is_altstaged=None
[2025-04-19 05:03:39]  is_tar=False
[2025-04-19 05:03:39]  lfn=log.44075483._069380.job.log.tgz.1
[2025-04-19 05:03:39]  mtime=0
[2025-04-19 05:03:39]  protocol_id=None
[2025-04-19 05:03:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 05:03:39]  replicas=None
[2025-04-19 05:03:39]  scope=mc23_13p6TeV
[2025-04-19 05:03:39]  status=None
[2025-04-19 05:03:39]  status_code=0
[2025-04-19 05:03:39]  storage_token=
[2025-04-19 05:03:39]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606461231/log.44075483._069380.job.log.tgz.1
[2025-04-19 05:03:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/1f/log.44075483._069380.job.log.tgz.1
[2025-04-19 05:03:39]  workdir=None
[2025-04-19 05:03:39] ]
[2025-04-19 05:03:39] 2025-04-19 03:03:19,266 | INFO     | transferring file log.44075483._069380.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606461231/log.44075483._069380.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 05:03:39] 2025-04-19 03:03:19,267 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606461231/log.44075483._069380.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0693
[2025-04-19 05:03:39] 2025-04-19 03:03:19,288 | INFO     | adding to output.list: log.44075483._069380.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/1f/log.44075483._069380.job.log.tg
[2025-04-19 05:03:39] 2025-04-19 03:03:19,288 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:03:39] 2025-04-19 03:03:19,288 | INFO     | summary of transferred files:
[2025-04-19 05:03:39] 2025-04-19 03:03:19,288 | INFO     |  -- lfn=log.44075483._069380.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:03:39] 2025-04-19 03:03:19,288 | INFO     | stage-out finished correctly
[2025-04-19 05:03:39] 2025-04-19 03:03:19,883 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:03:39] 2025-04-19 03:03:20,710 | INFO     | job 6606461231 has state=finished
[2025-04-19 05:03:39] 2025-04-19 03:03:20,710 | INFO     | preparing for final server update for job 6606461231 in state='finished'
[2025-04-19 05:03:39] 2025-04-19 03:03:20,710 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:03:39] 2025-04-19 03:03:20,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:03:39] 2025-04-19 03:03:20,710 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:03:39] 2025-04-19 03:03:20,711 | INFO     | job 6606461231 has finished - writing final server update
[2025-04-19 05:03:39] 2025-04-19 03:03:20,711 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:03:39] 2025-04-19 03:03:20,712 | INFO     | executing command: lscpu
[2025-04-19 05:03:39] 2025-04-19 03:03:20,734 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:03:39] 2025-04-19 03:03:22,827 | INFO     | PID=1111204 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 05:03:39] 2025-04-19 03:03:25,364 | WARNING  | process 1117814 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 05:03:39] 2025-04-19 03:03:25,364 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606461231/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:03:39] 2025-04-19 03:03:25,439 | INFO     | number of running child processes to parent process 1117814: 1
[2025-04-19 05:03:39] 2025-04-19 03:03:25,439 | INFO     | maximum number of monitored processes: 6
[2025-04-19 05:03:39] 2025-04-19 03:03:25,888 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606461231/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | INFO     | extracted standard info from prmon json
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:03:39] 2025-04-19 03:03:25,889 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | sum of square deviations: 97479037.0
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | sum of deviations: 6009160782.5
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | mean x: 1745029571.5
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | mean y: 2352617.3970588236
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | -- intersect: -107571168706.58339
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | intersect: -107571168706.58339
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | chi2: 0.9188983034780268
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | -- intersect: -107571168706.58339
[2025-04-19 05:03:39] 2025-04-19 03:03:25,890 | INFO     | current memory leak: 61.65 B/s (using 68 data points, chi2=0.92)
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | ..............................
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . Timing measurements:
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . get job = 0 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . initial setup = 1 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . payload setup = 4 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . stage-in = 0 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . payload execution = 4576 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . stage-out = 0 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | . log creation = 0 s
[2025-04-19 05:03:39] 2025-04-19 03:03:25,891 | INFO     | ..............................
[2025-04-19 05:03:39] 2025-04-19 03:03:26,045 | INFO     | 
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | job summary report
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | --------------------------------------------------
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | PanDA job id: 6606461231
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | task id: 44075483
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | errors: (none)
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | pilot state: finished 
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | transexitcode: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | exeerrorcode: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | exeerrordiag: 
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | exitcode: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | exitmsg: OK
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | cpuconsumptiontime: 15674 s
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | nevents: 400
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | neventsw: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | pid: 1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | pgrp: 1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | corecount: 4
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | event service: False
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | sizes: {0: 2426826, 4: 2427032, 11: 2427060, 4584: 2462134, 4585: 2462134, 4591: 2462304}
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | --------------------------------------------------
[2025-04-19 05:03:39] 2025-04-19 03:03:26,046 | INFO     | 
[2025-04-19 05:03:39] 2025-04-19 03:03:26,047 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 05:03:39] 2025-04-19 03:03:26,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | job 6606461231 has completed (purged errors)
[2025-04-19 05:03:39] 2025-04-19 03:03:26,068 | INFO     | overall cleanup function is called
[2025-04-19 05:03:39] 2025-04-19 03:03:27,075 | INFO     | --- collectZombieJob: --- 10, [1117814]
[2025-04-19 05:03:39] 2025-04-19 03:03:27,076 | INFO     | zombie collector waiting for pid 1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:27,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:03:39] 2025-04-19 03:03:27,076 | INFO     | collected zombie processes
[2025-04-19 05:03:39] 2025-04-19 03:03:27,076 | INFO     | will attempt to kill all subprocesses of pid=1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:27,128 | INFO     | process IDs to be killed: [1117814] (in reverse order)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,165 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:03:39] 2025-04-19 03:03:27,168 | INFO     | did not find any defunct processes belonging to 1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:27,170 | INFO     | did not find any defunct processes belonging to 1117814
[2025-04-19 05:03:39] 2025-04-19 03:03:27,170 | INFO     | ready for new job
[2025-04-19 05:03:39] 2025-04-19 03:03:27,170 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:03:39] 2025-04-19 03:03:27,170 | INFO     | **************************************
[2025-04-19 05:03:39] 2025-04-19 03:03:27,171 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:03:39] 2025-04-19 03:03:27,171 | INFO     | **************************************
[2025-04-19 05:03:39] 2025-04-19 03:03:27,171 | INFO     | 
[2025-04-19 05:03:39] 2025-04-19 03:03:27,171 | INFO     | architecture information:
[2025-04-19 05:03:39] 2025-04-19 03:03:27,171 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:03:39] 2025-04-19 03:03:27,186 | INFO     | cat /etc/os-release:
[2025-04-19 05:03:39] NAME="CentOS Linux"
[2025-04-19 05:03:39] VERSION="7 (Core)"
[2025-04-19 05:03:39] ID="centos"
[2025-04-19 05:03:39] ID_LIKE="rhel fedora"
[2025-04-19 05:03:39] VERSION_ID="7"
[2025-04-19 05:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:03:39] ANSI_COLOR="0;31"
[2025-04-19 05:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:03:39] HOME_URL="https://www.centos.org/"
[2025-04-19 05:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:03:39] 
[2025-04-19 05:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:03:39] 
[2025-04-19 05:03:39] 2025-04-19 03:03:27,186 | INFO     | **************************************
[2025-04-19 05:03:39] 2025-04-19 03:03:27,689 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | INFO     | sufficient remaining disk space (229542723584 B)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | INFO     | update_server=False
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:03:39] 2025-04-19 03:03:27,709 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,709 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:03:39] 2025-04-19 03:03:27,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:03:39] 2025-04-19 03:03:27,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:03:39] 2025-04-19 03:03:27,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:03:39] 2025-04-19 03:03:27,943 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 05:03:39] 2025-04-19 03:03:27,943 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 05:03:39] 2025-04-19 03:03:27,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:03:39] 2025-04-19 03:03:27,943 | INFO     | will abort loop
[2025-04-19 05:03:39] 2025-04-19 03:03:27,943 | INFO     | all payload control threads have been joined
[2025-04-19 05:03:39] 2025-04-19 03:03:28,268 | INFO     | all data control threads have been joined
[2025-04-19 05:03:39] 2025-04-19 03:03:28,714 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:28,714 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:28,723 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:28,786 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:28,934 | INFO     | all job control threads have been joined
[2025-04-19 05:03:39] 2025-04-19 03:03:28,949 | INFO     | [payload] control thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:28,949 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,274 | INFO     | [data] control thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,274 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,513 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,715 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:29,940 | INFO     | [job] control thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:30,095 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:30,112 | INFO     | [job] validate thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:30,139 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:30,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:03:39] 2025-04-19 03:03:34,445 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:03:39] 2025-04-19 03:03:34,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749102827328)>', '<ExcThread(monitor, started 139748018476800)>']
[2025-04-19 05:03:39] 2025-04-19 03:03:34,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:03:39] 2025-04-19 03:03:34,747 | INFO     | [monitor] control thread has ended
[2025-04-19 05:03:39] 2025-04-19 03:03:39,576 | INFO     | all workflow threads have been joined
[2025-04-19 05:03:39] 2025-04-19 03:03:39,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:03:39] 2025-04-19 03:03:39,577 | INFO     | traces error code: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:39,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:03:39] 2025-04-19 03:03:39,659 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:03:39] 2025-04-19 03:03:39,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:03:39] 2025-04-19 03:03:39,668 [wrapper] pilotpid: 1111204
[2025-04-19 05:03:39] 2025-04-19 03:03:39,672 [wrapper] Pilot exit status: 0
[2025-04-19 05:03:39] 2025-04-19 03:03:39,684 [wrapper] pandaids: 6606461231
[2025-04-19 05:03:39] 2025-04-19 03:03:39,710 [wrapper] cleanup supervisor_pilot 1130061 1111205
[2025-04-19 05:03:39] 2025-04-19 03:03:39,714 [wrapper] Test setup, not cleaning
[2025-04-19 05:03:39] 2025-04-19 03:03:39,719 [wrapper] apfmon messages muted
[2025-04-19 05:03:39] 2025-04-19 03:03:39,723 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:03:39] 2025-04-19 03:03:39,727 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:03:39]  *** Error codes and diagnostics ***
[2025-04-19 05:03:39]     "exeErrorCode": 0,
[2025-04-19 05:03:39]     "exeErrorDiag": "",
[2025-04-19 05:03:39]     "pilotErrorCode": 0,
[2025-04-19 05:03:39]     "pilotErrorDiag": "",
[2025-04-19 05:03:39]  *** Listing of results directory ***
[2025-04-19 05:03:39] total 406832
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc    495897 Apr 18 14:26 pilot3.tar.gz
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc      5111 Apr 18 14:47 queuedata.json
[2025-04-19 05:03:39] -rwx------ 1 boinc boinc     37140 Apr 18 14:48 runpilot2-wrapper.sh
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc       100 Apr 19 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:03:39] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 03:46 run_atlas
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc       105 Apr 19 03:46 job.xml
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc 222988401 Apr 19 03:46 EVNT.44075481._002695.pool.root.1
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc      6860 Apr 19 03:46 init_data.xml
[2025-04-19 05:03:39] drwxrwx--x 2 boinc boinc      4096 Apr 19 03:46 shared
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc    508889 Apr 19 03:46 input.tar.gz
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:46 start_atlas.sh
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc         0 Apr 19 03:46 boinc_lockfile
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc      2578 Apr 19 03:46 pandaJob.out
[2025-04-19 05:03:39] -rw------- 1 boinc boinc       424 Apr 19 03:46 setup.sh.local
[2025-04-19 05:03:39] -rw------- 1 boinc boinc    991292 Apr 19 03:46 agis_schedconf.cvmfs.json
[2025-04-19 05:03:39] -rw------- 1 boinc boinc   1618536 Apr 19 03:46 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:03:39] drwx------ 4 boinc boinc      4096 Apr 19 03:46 pilot3
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc       529 Apr 19 05:02 boinc_task_state.xml
[2025-04-19 05:03:39] -rw------- 1 boinc boinc 188329511 Apr 19 05:02 HITS.44075483._069380.pool.root.1
[2025-04-19 05:03:39] -rw------- 1 boinc boinc        95 Apr 19 05:03 pilot_heartbeat.json
[2025-04-19 05:03:39] -rw------- 1 boinc boinc      1022 Apr 19 05:03 memory_monitor_summary.json
[2025-04-19 05:03:39] -rw------- 1 boinc boinc    253513 Apr 19 05:03 log.44075483._069380.job.log.tgz.1
[2025-04-19 05:03:39] -rw------- 1 boinc boinc      7662 Apr 19 05:03 heartbeat.json
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc        27 Apr 19 05:03 wrapper_checkpoint.txt
[2025-04-19 05:03:39] -rw------- 1 boinc boinc      4666 Apr 19 05:03 pilotlog.txt
[2025-04-19 05:03:39] -rw------- 1 boinc boinc    452481 Apr 19 05:03 log.44075483._069380.job.log.1
[2025-04-19 05:03:39] -rw------- 1 boinc boinc       357 Apr 19 05:03 output.list
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc       620 Apr 19 05:03 runtime_log
[2025-04-19 05:03:39] -rw------- 1 boinc boinc    727040 Apr 19 05:03 result.tar.gz
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc     11099 Apr 19 05:03 runtime_log.err
[2025-04-19 05:03:39] -rw------- 1 boinc boinc       658 Apr 19 05:03 GxDODmEK0P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrJfLDm0Vr8Xn.diag
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc      8192 Apr 19 05:03 boinc_mmap_file
[2025-04-19 05:03:39] -rw-r--r-- 1 boinc boinc     21441 Apr 19 05:03 stderr.txt
[2025-04-19 05:03:39] HITS file was successfully produced:
[2025-04-19 05:03:39] -rw------- 1 boinc boinc 188329511 Apr 19 05:02 shared/HITS.pool.root.1
[2025-04-19 05:03:39]  *** Contents of shared directory: ***
[2025-04-19 05:03:39] total 402916
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc 222988401 Apr 19 03:46 ATLAS.root_0
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc    508889 Apr 19 03:46 input.tar.gz
[2025-04-19 05:03:39] -rw-r--r-- 2 boinc boinc     17569 Apr 19 03:46 start_atlas.sh
[2025-04-19 05:03:39] -rw------- 1 boinc boinc 188329511 Apr 19 05:02 HITS.pool.root.1
[2025-04-19 05:03:39] -rw------- 1 boinc boinc    727040 Apr 19 05:03 result.tar.gz
05:04:01 (1107462): run_atlas exited; CPU time 15693.320850
05:04:01 (1107462): called boinc_finish(0)

</stderr_txt>
]]>

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