Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:31:47 (948099): wrapper (7.7.26015): starting
04:31:47 (948099): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 04:31:47] Arguments: --nthreads 3
[2025-04-19 04:31:47] Threads: 3
[2025-04-19 04:31:47] Checking for CVMFS
[2025-04-19 04:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:31:48] 2.9.2.0 2922 3531 68084 145023 1 55 26239181 36864000 0 130560 0 2448904 99.990 798436 10325 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 04:31:48] CVMFS is ok
[2025-04-19 04:31:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:31:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:31:48] Further information can be found at the LHC@home message board.
[2025-04-19 04:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:31:48] Checking for apptainer binary...
[2025-04-19 04:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:31:48] Running /usr/bin/apptainer --version
[2025-04-19 04:31:48] apptainer version 1.3.6-6.1
[2025-04-19 04:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:31:48] thA361
[2025-04-19 04:31:48] apptainer works
[2025-04-19 04:31:48] Set ATHENA_PROC_NUMBER=3
[2025-04-19 04:31:48] Set ATHENA_CORE_NUMBER=3
[2025-04-19 04:31:48] Starting ATLAS job with PandaID=6606460261
[2025-04-19 04:31:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:11:04]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:11:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 06:11:04]  replicas=None
[2025-04-19 06:11:04]  scope=mc23_13p6TeV
[2025-04-19 06:11:04]  status=None
[2025-04-19 06:11:04]  status_code=0
[2025-04-19 06:11:04]  storage_token=
[2025-04-19 06:11:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606460261/log.44075483._069120.job.log.tgz.1
[2025-04-19 06:11:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/28/log.44075483._069120.job.log.tgz.1
[2025-04-19 06:11:04]  workdir=None
[2025-04-19 06:11:04] ]
[2025-04-19 06:11:04] 2025-04-19 04:10:39,941 | INFO     | transferring file log.44075483._069120.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606460261/log.44075483._069120.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 06:11:04] 2025-04-19 04:10:39,941 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606460261/log.44075483._069120.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0691
[2025-04-19 06:11:04] 2025-04-19 04:10:39,951 | INFO     | monitor loop #455: job 0:6606460261 is in state 'stageout'
[2025-04-19 06:11:04] 2025-04-19 04:10:39,951 | WARNING  | aborting job monitor tasks since payload process 958210 is not running
[2025-04-19 06:11:04] 2025-04-19 04:10:39,953 | INFO     | adding to output.list: log.44075483._069120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/28/log.44075483._069120.job.log.tg
[2025-04-19 06:11:04] 2025-04-19 04:10:39,954 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 06:11:04] 2025-04-19 04:10:39,954 | INFO     | summary of transferred files:
[2025-04-19 06:11:04] 2025-04-19 04:10:39,954 | INFO     |  -- lfn=log.44075483._069120.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 06:11:04] 2025-04-19 04:10:39,954 | INFO     | stage-out finished correctly
[2025-04-19 06:11:04] 2025-04-19 04:10:42,455 | INFO     | monitor loop #456: job 0:6606460261 is in state 'finished'
[2025-04-19 06:11:04] 2025-04-19 04:10:42,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:04] 2025-04-19 04:10:43,300 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 06:11:04] 2025-04-19 04:10:44,959 | INFO     | monitor loop #457: job 0:6606460261 is in state 'finished'
[2025-04-19 06:11:04] 2025-04-19 04:10:44,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:04] 2025-04-19 04:10:45,238 | INFO     | PID=951765 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 06:11:04] 2025-04-19 04:10:46,024 | INFO     | job 6606460261 has state=finished
[2025-04-19 06:11:04] 2025-04-19 04:10:46,024 | INFO     | preparing for final server update for job 6606460261 in state='finished'
[2025-04-19 06:11:04] 2025-04-19 04:10:46,025 | INFO     | this job has now completed (state=finished)
[2025-04-19 06:11:04] 2025-04-19 04:10:46,025 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 06:11:04] 2025-04-19 04:10:46,025 | INFO     | log transfer has been attempted: DONE
[2025-04-19 06:11:04] 2025-04-19 04:10:46,026 | INFO     | job 6606460261 has finished - writing final server update
[2025-04-19 06:11:04] 2025-04-19 04:10:46,026 | INFO     | total number of processed events: 400 (read)
[2025-04-19 06:11:04] 2025-04-19 04:10:46,029 | INFO     | executing command: lscpu
[2025-04-19 06:11:04] 2025-04-19 04:10:46,042 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 06:11:04] 2025-04-19 04:10:47,463 | INFO     | monitor loop #458: job 0:6606460261 is in state 'finished'
[2025-04-19 06:11:04] 2025-04-19 04:10:47,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:04] 2025-04-19 04:10:49,967 | INFO     | monitor loop #459: job 0:6606460261 is in state 'finished'
[2025-04-19 06:11:04] 2025-04-19 04:10:49,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,472 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606460261/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | INFO     | extracted standard info from prmon json
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 06:11:04] 2025-04-19 04:10:50,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | fitting pss+swap vs Time
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | sum of square deviations: 226022842.5
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | sum of deviations: 843322559.9999994
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | mean x: 1745032965.5
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | mean y: 2417417.688888889
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | -- intersect: -6508542498.894988
[2025-04-19 06:11:04] 2025-04-19 04:10:50,474 | INFO     | intersect: -6508542498.894988
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | chi2: 1.0659672738949915
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | -- intersect: -6508542498.894988
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | current memory leak: 3.73 B/s (using 90 data points, chi2=1.07)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | ..............................
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . Timing measurements:
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . get job = 0 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . initial setup = 1 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . payload setup = 5 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . stage-in = 0 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . payload execution = 5892 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . stage-out = 0 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | . log creation = 0 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,475 | INFO     | ..............................
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | 
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | job summary report
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | --------------------------------------------------
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | PanDA job id: 6606460261
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | task id: 44075483
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | errors: (none)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | pilot state: finished 
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | transexitcode: 0
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | exeerrorcode: 0
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | exeerrordiag: 
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | exitcode: 0
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | exitmsg: OK
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | cpuconsumptiontime: 15732 s
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | nevents: 400
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | neventsw: 0
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | pid: 958210
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | pgrp: 958210
[2025-04-19 06:11:04] 2025-04-19 04:10:50,542 | INFO     | corecount: 3
[2025-04-19 06:11:04] 2025-04-19 04:10:50,543 | INFO     | event service: False
[2025-04-19 06:11:04] 2025-04-19 04:10:50,543 | INFO     | sizes: {0: 2426827, 4: 2427033, 11: 2427061, 5901: 2453754, 5902: 2453753, 5903: 2462756, 5906: 2462940, 5913: 2463110}
[2025-04-19 06:11:04] 2025-04-19 04:10:50,543 | INFO     | --------------------------------------------------
[2025-04-19 06:11:04] 2025-04-19 04:10:50,543 | INFO     | 
[2025-04-19 06:11:04] 2025-04-19 04:10:50,543 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 06:11:04] 2025-04-19 04:10:50,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | job 6606460261 has completed (purged errors)
[2025-04-19 06:11:04] 2025-04-19 04:10:50,557 | INFO     | overall cleanup function is called
[2025-04-19 06:11:04] 2025-04-19 04:10:51,563 | INFO     | --- collectZombieJob: --- 10, [958210]
[2025-04-19 06:11:04] 2025-04-19 04:10:51,564 | INFO     | zombie collector waiting for pid 958210
[2025-04-19 06:11:04] 2025-04-19 04:10:51,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:11:04] 2025-04-19 04:10:51,564 | INFO     | collected zombie processes
[2025-04-19 06:11:04] 2025-04-19 04:10:51,565 | INFO     | will attempt to kill all subprocesses of pid=958210
[2025-04-19 06:11:04] 2025-04-19 04:10:51,605 | INFO     | process IDs to be killed: [958210] (in reverse order)
[2025-04-19 06:11:04] 2025-04-19 04:10:51,631 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:11:04] 2025-04-19 04:10:51,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:11:04] 2025-04-19 04:10:51,632 | INFO     | did not find any defunct processes belonging to 958210
[2025-04-19 06:11:04] 2025-04-19 04:10:51,633 | INFO     | did not find any defunct processes belonging to 958210
[2025-04-19 06:11:04] 2025-04-19 04:10:51,633 | INFO     | ready for new job
[2025-04-19 06:11:04] 2025-04-19 04:10:51,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:11:04] 2025-04-19 04:10:51,634 | INFO     | **************************************
[2025-04-19 06:11:04] 2025-04-19 04:10:51,634 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:11:04] 2025-04-19 04:10:51,634 | INFO     | **************************************
[2025-04-19 06:11:04] 2025-04-19 04:10:51,634 | INFO     | 
[2025-04-19 06:11:04] 2025-04-19 04:10:51,635 | INFO     | architecture information:
[2025-04-19 06:11:04] 2025-04-19 04:10:51,635 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:11:04] 2025-04-19 04:10:51,644 | INFO     | cat /etc/os-release:
[2025-04-19 06:11:04] NAME="CentOS Linux"
[2025-04-19 06:11:04] VERSION="7 (Core)"
[2025-04-19 06:11:04] ID="centos"
[2025-04-19 06:11:04] ID_LIKE="rhel fedora"
[2025-04-19 06:11:04] VERSION_ID="7"
[2025-04-19 06:11:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:11:04] ANSI_COLOR="0;31"
[2025-04-19 06:11:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:11:04] HOME_URL="https://www.centos.org/"
[2025-04-19 06:11:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:11:04] 
[2025-04-19 06:11:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:11:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:11:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:11:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:11:04] 
[2025-04-19 06:11:04] 2025-04-19 04:10:51,644 | INFO     | **************************************
[2025-04-19 06:11:04] 2025-04-19 04:10:52,147 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | INFO     | sufficient remaining disk space (830887428096 B)
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | INFO     | update_server=False
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:11:04] 2025-04-19 04:10:52,161 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:11:04] 2025-04-19 04:10:52,162 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:11:04] 2025-04-19 04:10:52,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:11:04] 2025-04-19 04:10:52,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:11:04] 2025-04-19 04:10:52,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:11:04] 2025-04-19 04:10:52,470 | INFO     | all payload control threads have been joined
[2025-04-19 06:11:04] 2025-04-19 04:10:52,472 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 06:11:04] 2025-04-19 04:10:52,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 06:11:04] 2025-04-19 04:10:52,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:11:04] 2025-04-19 04:10:52,472 | INFO     | will abort loop
[2025-04-19 06:11:04] 2025-04-19 04:10:52,891 | INFO     | all data control threads have been joined
[2025-04-19 06:11:04] 2025-04-19 04:10:53,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:11:04] 2025-04-19 04:10:53,167 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,168 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,192 | INFO     | all job control threads have been joined
[2025-04-19 06:11:04] 2025-04-19 04:10:53,299 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,476 | INFO     | [payload] control thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,478 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,702 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:53,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:11:04] 2025-04-19 04:10:53,897 | INFO     | [data] control thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,198 | INFO     | [job] control thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,251 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,497 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,618 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,642 | INFO     | [job] validate thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:54,664 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:55,017 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:57,851 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:11:04] 2025-04-19 04:10:59,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016669263680)>', '<ExcThread(monitor, started 140016026101504)>']
[2025-04-19 06:11:04] 2025-04-19 04:11:00,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:11:04] 2025-04-19 04:11:00,206 | INFO     | [monitor] control thread has ended
[2025-04-19 06:11:04] 2025-04-19 04:11:04,252 | INFO     | all workflow threads have been joined
[2025-04-19 06:11:04] 2025-04-19 04:11:04,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:11:04] 2025-04-19 04:11:04,252 | INFO     | traces error code: 0
[2025-04-19 06:11:04] 2025-04-19 04:11:04,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:11:04] 2025-04-19 04:11:04,312 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:11:04] 2025-04-19 04:11:04,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:11:04] 2025-04-19 04:11:04,318 [wrapper] pilotpid: 951765
[2025-04-19 06:11:04] 2025-04-19 04:11:04,321 [wrapper] Pilot exit status: 0
[2025-04-19 06:11:04] 2025-04-19 04:11:04,329 [wrapper] pandaids: 6606460261
[2025-04-19 06:11:04] 2025-04-19 04:11:04,345 [wrapper] cleanup supervisor_pilot  970347 951766
[2025-04-19 06:11:04] 2025-04-19 04:11:04,348 [wrapper] Test setup, not cleaning
[2025-04-19 06:11:04] 2025-04-19 04:11:04,350 [wrapper] apfmon messages muted
[2025-04-19 06:11:04] 2025-04-19 04:11:04,352 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:11:04] 2025-04-19 04:11:04,355 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:11:04]  *** Error codes and diagnostics ***
[2025-04-19 06:11:04]     "exeErrorCode": 0,
[2025-04-19 06:11:04]     "exeErrorDiag": "",
[2025-04-19 06:11:04]     "pilotErrorCode": 0,
[2025-04-19 06:11:04]     "pilotErrorDiag": "",
[2025-04-19 06:11:04]  *** Listing of results directory ***
[2025-04-19 06:11:04] total 411304
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc    495897 Apr 18 14:20 pilot3.tar.gz
[2025-04-19 06:11:04] -rwx------ 1 boinc boinc     37140 Apr 18 14:23 runpilot2-wrapper.sh
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc      5111 Apr 18 14:23 queuedata.json
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc       100 Apr 19 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:11:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 04:31 run_atlas
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc       105 Apr 19 04:31 job.xml
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc 223252452 Apr 19 04:31 EVNT.44075481._002685.pool.root.1
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc      6679 Apr 19 04:31 init_data.xml
[2025-04-19 06:11:04] drwxrwx--x 2 boinc boinc      4096 Apr 19 04:31 shared
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc    508890 Apr 19 04:31 input.tar.gz
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:31 start_atlas.sh
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc         0 Apr 19 04:31 boinc_lockfile
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc      2579 Apr 19 04:31 pandaJob.out
[2025-04-19 06:11:04] -rw------- 1 boinc boinc       424 Apr 19 04:31 setup.sh.local
[2025-04-19 06:11:04] -rw------- 1 boinc boinc    991292 Apr 19 04:31 agis_schedconf.cvmfs.json
[2025-04-19 06:11:04] -rw------- 1 boinc boinc   1618536 Apr 19 04:31 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:11:04] drwx------ 4 boinc boinc      4096 Apr 19 04:32 pilot3
[2025-04-19 06:11:04] -rw------- 1 boinc boinc 192454444 Apr 19 06:10 HITS.44075483._069120.pool.root.1
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc       529 Apr 19 06:10 boinc_task_state.xml
[2025-04-19 06:11:04] -rw------- 1 boinc boinc        95 Apr 19 06:10 pilot_heartbeat.json
[2025-04-19 06:11:04] -rw------- 1 boinc boinc      1018 Apr 19 06:10 memory_monitor_summary.json
[2025-04-19 06:11:04] -rw------- 1 boinc boinc    237962 Apr 19 06:10 log.44075483._069120.job.log.tgz.1
[2025-04-19 06:11:04] -rw------- 1 boinc boinc      7653 Apr 19 06:10 heartbeat.json
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc      8192 Apr 19 06:11 boinc_mmap_file
[2025-04-19 06:11:04] -rw------- 1 boinc boinc      4666 Apr 19 06:11 pilotlog.txt
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc        27 Apr 19 06:11 wrapper_checkpoint.txt
[2025-04-19 06:11:04] -rw------- 1 boinc boinc    567305 Apr 19 06:11 log.44075483._069120.job.log.1
[2025-04-19 06:11:04] -rw------- 1 boinc boinc       357 Apr 19 06:11 output.list
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc       620 Apr 19 06:11 runtime_log
[2025-04-19 06:11:04] -rw------- 1 boinc boinc    819200 Apr 19 06:11 result.tar.gz
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc     11099 Apr 19 06:11 runtime_log.err
[2025-04-19 06:11:04] -rw------- 1 boinc boinc       658 Apr 19 06:11 MQ0NDmGwzP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYHfLDmEuqsDn.diag
[2025-04-19 06:11:04] -rw-r--r-- 1 boinc boinc     21923 Apr 19 06:11 stderr.txt
[2025-04-19 06:11:04] HITS file was successfully produced:
[2025-04-19 06:11:04] -rw------- 1 boinc boinc 192454444 Apr 19 06:10 shared/HITS.pool.root.1
[2025-04-19 06:11:04]  *** Contents of shared directory: ***
[2025-04-19 06:11:04] total 407288
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc 223252452 Apr 19 04:31 ATLAS.root_0
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc    508890 Apr 19 04:31 input.tar.gz
[2025-04-19 06:11:04] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:31 start_atlas.sh
[2025-04-19 06:11:04] -rw------- 1 boinc boinc 192454444 Apr 19 06:10 HITS.pool.root.1
[2025-04-19 06:11:04] -rw------- 1 boinc boinc    819200 Apr 19 06:11 result.tar.gz
06:11:06 (948099): run_atlas exited; CPU time 15764.835967
06:11:06 (948099): called boinc_finish(0)

</stderr_txt>
]]>

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