Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:07 (27168): wrapper (7.7.26015): starting
11:28:07 (27168): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 11:28:07] Arguments: --nthreads 12
[2025-04-18 11:28:07] Threads: 12
[2025-04-18 11:28:07] Checking for CVMFS
[2025-04-18 11:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 11:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 11:28:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 11:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 11:28:07] 2.11.2.0 10568 276025 164320 145007 1 55 18780964 20275201 1 130560 0 22875964 99.990 7068063 51199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 11:28:07] CVMFS is ok
[2025-04-18 11:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 11:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 11:28:07] Further information can be found at the LHC@home message board.
[2025-04-18 11:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 11:28:07] Checking for apptainer binary...
[2025-04-18 11:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 11:28:07] Running /usr/bin/apptainer --version
[2025-04-18 11:28:07] apptainer version 1.3.2-1.el7
[2025-04-18 11:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 11:28:09] c-205-24.aglt2.org
[2025-04-18 11:28:09] apptainer works
[2025-04-18 11:28:09] Set ATHENA_PROC_NUMBER=12
[2025-04-18 11:28:09] Set ATHENA_CORE_NUMBER=12
[2025-04-18 11:28:09] Starting ATLAS job with PandaID=6606459617
[2025-04-18 11:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 12:53:45]  *** The last 200 lines of the pilot log: ***
[2025-04-18 12:53:45]  is_tar=False
[2025-04-18 12:53:45]  lfn=log.44075483._069031.job.log.tgz.1
[2025-04-18 12:53:45]  mtime=0
[2025-04-18 12:53:45]  protocol_id=None
[2025-04-18 12:53:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 12:53:45]  replicas=None
[2025-04-18 12:53:45]  scope=mc23_13p6TeV
[2025-04-18 12:53:45]  status=None
[2025-04-18 12:53:45]  status_code=0
[2025-04-18 12:53:45]  storage_token=
[2025-04-18 12:53:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606459617/log.44075483._069031.job.log.tgz.1
[2025-04-18 12:53:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/21/log.44075483._069031.job.log.tgz.1
[2025-04-18 12:53:45]  workdir=None
[2025-04-18 12:53:45] ]
[2025-04-18 12:53:45] 2025-04-18 16:53:19,200 | INFO     | transferring file log.44075483._069031.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606459617/log.44075483._069031.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 12:53:45] 2025-04-18 16:53:19,200 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606459617/log.44075483._069031.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._069031.job
[2025-04-18 12:53:45] 2025-04-18 16:53:19,220 | INFO     | adding to output.list: log.44075483._069031.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/21/log.44075483._069031.job.log.tg
[2025-04-18 12:53:45] 2025-04-18 16:53:19,221 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 12:53:45] 2025-04-18 16:53:19,221 | INFO     | summary of transferred files:
[2025-04-18 12:53:45] 2025-04-18 16:53:19,221 | INFO     |  -- lfn=log.44075483._069031.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 12:53:45] 2025-04-18 16:53:19,222 | INFO     | stage-out finished correctly
[2025-04-18 12:53:45] 2025-04-18 16:53:19,638 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 12:53:45] 2025-04-18 16:53:21,738 | INFO     | job 6606459617 has state=finished
[2025-04-18 12:53:45] 2025-04-18 16:53:21,739 | INFO     | preparing for final server update for job 6606459617 in state='finished'
[2025-04-18 12:53:45] 2025-04-18 16:53:21,739 | INFO     | this job has now completed (state=finished)
[2025-04-18 12:53:45] 2025-04-18 16:53:21,739 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 12:53:45] 2025-04-18 16:53:21,740 | INFO     | log transfer has been attempted: DONE
[2025-04-18 12:53:45] 2025-04-18 16:53:21,740 | INFO     | job 6606459617 has finished - writing final server update
[2025-04-18 12:53:45] 2025-04-18 16:53:21,740 | INFO     | total number of processed events: 400 (read)
[2025-04-18 12:53:45] 2025-04-18 16:53:21,742 | INFO     | executing command: lscpu
[2025-04-18 12:53:45] 2025-04-18 16:53:21,771 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 12:53:45] 2025-04-18 16:53:22,358 | INFO     | PID=30766 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 12:53:45] 2025-04-18 16:53:22,581 | WARNING  | process 4828 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 12:53:45] 2025-04-18 16:53:22,581 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606459617/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:53:45] 2025-04-18 16:53:22,669 | INFO     | number of running child processes to parent process 4828: 1
[2025-04-18 12:53:45] 2025-04-18 16:53:22,669 | INFO     | maximum number of monitored processes: 6
[2025-04-18 12:53:45] 2025-04-18 16:53:25,173 | INFO     | monitor loop #382: job 0:6606459617 is in state 'finished'
[2025-04-18 12:53:45] 2025-04-18 16:53:25,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,444 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 12:53:45] 2025-04-18 16:53:26,444 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606459617/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,445 | INFO     | extracted standard info from prmon json
[2025-04-18 12:53:45] 2025-04-18 16:53:26,445 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 12:53:45] 2025-04-18 16:53:26,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 12:53:45] 2025-04-18 16:53:26,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 12:53:45] 2025-04-18 16:53:26,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 12:53:45] 2025-04-18 16:53:26,448 | INFO     | fitting pss+swap vs Time
[2025-04-18 12:53:45] 2025-04-18 16:53:26,448 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,449 | INFO     | sum of deviations: 17938706363.5
[2025-04-18 12:53:45] 2025-04-18 16:53:26,449 | INFO     | mean x: 1744992724.5
[2025-04-18 12:53:45] 2025-04-18 16:53:26,449 | INFO     | mean y: 2609941.75
[2025-04-18 12:53:45] 2025-04-18 16:53:26,449 | INFO     | -- intersect: -230004222324.83438
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | intersect: -230004222324.83438
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | chi2: 2.313321260651326
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | -- intersect: -230004222324.83438
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | current memory leak: 131.81 B/s (using 76 data points, chi2=2.31)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | ..............................
[2025-04-18 12:53:45] 2025-04-18 16:53:26,450 | INFO     | . Timing measurements:
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . get job = 0 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . initial setup = 2 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . payload setup = 7 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . stage-in = 0 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . payload execution = 5067 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . stage-out = 0 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | . log creation = 0 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,451 | INFO     | ..............................
[2025-04-18 12:53:45] 2025-04-18 16:53:26,897 | INFO     | 
[2025-04-18 12:53:45] 2025-04-18 16:53:26,897 | INFO     | job summary report
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | --------------------------------------------------
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | PanDA job id: 6606459617
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | task id: 44075483
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | errors: (none)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 12:53:45] 2025-04-18 16:53:26,898 | INFO     | pilot state: finished 
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | transexitcode: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | exeerrorcode: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | exeerrordiag: 
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | exitcode: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | exitmsg: OK
[2025-04-18 12:53:45] 2025-04-18 16:53:26,899 | INFO     | cpuconsumptiontime: 47690 s
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | nevents: 400
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | neventsw: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | pid: 4828
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | pgrp: 4828
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | corecount: 12
[2025-04-18 12:53:45] 2025-04-18 16:53:26,900 | INFO     | event service: False
[2025-04-18 12:53:45] 2025-04-18 16:53:26,901 | INFO     | sizes: {0: 2426823, 5: 2427029, 11: 2427085, 5078: 2453262, 5079: 2453261, 5080: 2462258, 5081: 2462442, 5088: 2462612}
[2025-04-18 12:53:45] 2025-04-18 16:53:26,901 | INFO     | --------------------------------------------------
[2025-04-18 12:53:45] 2025-04-18 16:53:26,901 | INFO     | 
[2025-04-18 12:53:45] 2025-04-18 16:53:26,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 12:53:45] 2025-04-18 16:53:26,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 12:53:45] 2025-04-18 16:53:26,927 | INFO     | job 6606459617 has completed (purged errors)
[2025-04-18 12:53:45] 2025-04-18 16:53:26,927 | INFO     | overall cleanup function is called
[2025-04-18 12:53:45] 2025-04-18 16:53:27,370 | INFO     | 5107s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-18 12:53:45] 2025-04-18 16:53:27,930 | INFO     | --- collectZombieJob: --- 10, [4828]
[2025-04-18 12:53:45] 2025-04-18 16:53:27,931 | INFO     | zombie collector waiting for pid 4828
[2025-04-18 12:53:45] 2025-04-18 16:53:27,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 12:53:45] 2025-04-18 16:53:27,931 | INFO     | collected zombie processes
[2025-04-18 12:53:45] 2025-04-18 16:53:27,931 | INFO     | will attempt to kill all subprocesses of pid=4828
[2025-04-18 12:53:45] 2025-04-18 16:53:28,028 | INFO     | process IDs to be killed: [4828] (in reverse order)
[2025-04-18 12:53:45] 2025-04-18 16:53:28,080 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 12:53:45] 2025-04-18 16:53:28,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 12:53:45] 2025-04-18 16:53:28,084 | INFO     | did not find any defunct processes belonging to 4828
[2025-04-18 12:53:45] 2025-04-18 16:53:28,088 | INFO     | did not find any defunct processes belonging to 4828
[2025-04-18 12:53:45] 2025-04-18 16:53:28,088 | INFO     | ready for new job
[2025-04-18 12:53:45] 2025-04-18 16:53:28,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 12:53:45] 2025-04-18 16:53:28,090 | INFO     | **************************************
[2025-04-18 12:53:45] 2025-04-18 16:53:28,090 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 12:53:45] 2025-04-18 16:53:28,090 | INFO     | **************************************
[2025-04-18 12:53:45] 2025-04-18 16:53:28,090 | INFO     | 
[2025-04-18 12:53:45] 2025-04-18 16:53:28,091 | INFO     | architecture information:
[2025-04-18 12:53:45] 2025-04-18 16:53:28,091 | INFO     | executing command: cat /etc/os-release
[2025-04-18 12:53:45] 2025-04-18 16:53:28,107 | INFO     | cat /etc/os-release:
[2025-04-18 12:53:45] NAME="CentOS Linux"
[2025-04-18 12:53:45] VERSION="7 (Core)"
[2025-04-18 12:53:45] ID="centos"
[2025-04-18 12:53:45] ID_LIKE="rhel fedora"
[2025-04-18 12:53:45] VERSION_ID="7"
[2025-04-18 12:53:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 12:53:45] ANSI_COLOR="0;31"
[2025-04-18 12:53:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 12:53:45] HOME_URL="https://www.centos.org/"
[2025-04-18 12:53:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 12:53:45] 
[2025-04-18 12:53:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 12:53:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 12:53:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 12:53:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 12:53:45] 
[2025-04-18 12:53:45] 2025-04-18 16:53:28,107 | INFO     | **************************************
[2025-04-18 12:53:45] 2025-04-18 16:53:28,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 12:53:45] 2025-04-18 16:53:28,628 | INFO     | sufficient remaining disk space (29384245248 B)
[2025-04-18 12:53:45] 2025-04-18 16:53:28,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 12:53:45] 2025-04-18 16:53:28,629 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 12:53:45] 2025-04-18 16:53:28,629 | INFO     | update_server=False
[2025-04-18 12:53:45] 2025-04-18 16:53:28,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 12:53:45] 2025-04-18 16:53:28,629 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 12:53:45] 2025-04-18 16:53:28,630 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 12:53:45] 2025-04-18 16:53:28,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 12:53:45] 2025-04-18 16:53:28,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 12:53:45] 2025-04-18 16:53:28,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:53:45] 2025-04-18 16:53:28,681 | INFO     | aborting loop
[2025-04-18 12:53:45] 2025-04-18 16:53:29,355 | INFO     | all job control threads have been joined
[2025-04-18 12:53:45] 2025-04-18 16:53:29,486 | INFO     | all data control threads have been joined
[2025-04-18 12:53:45] 2025-04-18 16:53:29,603 | INFO     | all payload control threads have been joined
[2025-04-18 12:53:45] 2025-04-18 16:53:29,635 | INFO     | [job] retrieve thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:29,687 | INFO     | [job] job monitor thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:29,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 12:53:45] 2025-04-18 16:53:29,855 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:29,872 | INFO     | [payload] validate_post thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,008 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 12:53:45] 2025-04-18 16:53:30,286 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,361 | INFO     | [job] control thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,406 | INFO     | [data] copytool_in thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,489 | INFO     | [data] control thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,609 | INFO     | [payload] control thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,825 | INFO     | [job] validate thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:30,852 | INFO     | [payload] failed_post thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:31,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:53:45] 2025-04-18 16:53:31,821 | INFO     | [data] copytool_out thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:32,542 | INFO     | [job] queue monitor thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:34,236 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:38,957 | INFO     | job.realtimelogging is not enabled
[2025-04-18 12:53:45] 2025-04-18 16:53:39,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 12:53:45] 2025-04-18 16:53:40,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739462756160)>', '<ExcThread(monitor, started 139738874885888)>']
[2025-04-18 12:53:45] 2025-04-18 16:53:40,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 12:53:45] 2025-04-18 16:53:40,683 | INFO     | [monitor] control thread has ended
[2025-04-18 12:53:45] 2025-04-18 16:53:45,332 | INFO     | all workflow threads have been joined
[2025-04-18 12:53:45] 2025-04-18 16:53:45,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 12:53:45] 2025-04-18 16:53:45,333 | INFO     | traces error code: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:45,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 12:53:45] 2025-04-18 16:53:45,418 [wrapper] ==== pilot stdout END ====
[2025-04-18 12:53:45] 2025-04-18 16:53:45,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 12:53:45] 2025-04-18 16:53:45,426 [wrapper] pilotpid: 30766
[2025-04-18 12:53:45] 2025-04-18 16:53:45,430 [wrapper] Pilot exit status: 0
[2025-04-18 12:53:45] 2025-04-18 16:53:45,446 [wrapper] pandaids: 6606459617
[2025-04-18 12:53:45] 2025-04-18 16:53:45,484 [wrapper] cleanup supervisor_pilot 18660 30767
[2025-04-18 12:53:45] 2025-04-18 16:53:45,489 [wrapper] Test setup, not cleaning
[2025-04-18 12:53:45] 2025-04-18 16:53:45,493 [wrapper] apfmon messages muted
[2025-04-18 12:53:45] 2025-04-18 16:53:45,497 [wrapper] ==== wrapper stdout END ====
[2025-04-18 12:53:45] 2025-04-18 16:53:45,501 [wrapper] ==== wrapper stderr END ====
[2025-04-18 12:53:45]  *** Error codes and diagnostics ***
[2025-04-18 12:53:45]     "exeErrorCode": 0,
[2025-04-18 12:53:45]     "exeErrorDiag": "",
[2025-04-18 12:53:45]     "pilotErrorCode": 0,
[2025-04-18 12:53:45]     "pilotErrorDiag": "",
[2025-04-18 12:53:45]  *** Listing of results directory ***
[2025-04-18 12:53:45] total 424152
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 08:04 pilot3.tar.gz
[2025-04-18 12:53:45] -rwx------ 1 boincer umatlas     37140 Apr 18 08:09 runpilot2-wrapper.sh
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 08:09 queuedata.json
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas       100 Apr 18 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 12:53:45] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 11:28 run_atlas
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas       105 Apr 18 11:28 job.xml
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas 226013156 Apr 18 11:28 EVNT.44075481._002681.pool.root.1
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:28 start_atlas.sh
[2025-04-18 12:53:45] drwxrwx--x 2 boincer umatlas      4096 Apr 18 11:28 shared
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 11:28 input.tar.gz
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas         0 Apr 18 11:28 boinc_lockfile
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 11:28 pandaJob.out
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas       424 Apr 18 11:28 setup.sh.local
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas    990596 Apr 18 11:28 agis_schedconf.cvmfs.json
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas   1618536 Apr 18 11:28 agis_ddmendpoints.agis.ALL.json
[2025-04-18 12:53:45] drwx------ 4 boincer umatlas      4096 Apr 18 11:28 pilot3
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 12:47 init_data.xml
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas 202734616 Apr 18 12:52 HITS.44075483._069031.pool.root.1
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas       530 Apr 18 12:52 boinc_task_state.xml
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas      1047 Apr 18 12:53 memory_monitor_summary.json
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas    381499 Apr 18 12:53 log.44075483._069031.job.log.tgz.1
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas        95 Apr 18 12:53 pilot_heartbeat.json
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 12:53 boinc_mmap_file
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas        27 Apr 18 12:53 wrapper_checkpoint.txt
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas      7753 Apr 18 12:53 heartbeat.json
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas      4548 Apr 18 12:53 pilotlog.txt
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas    483394 Apr 18 12:53 log.44075483._069031.job.log.1
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas       357 Apr 18 12:53 output.list
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas       620 Apr 18 12:53 runtime_log
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas    880640 Apr 18 12:53 result.tar.gz
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 12:53 runtime_log.err
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas       658 Apr 18 12:53 CjCNDmPizP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBGfLDmO3Miwn.diag
[2025-04-18 12:53:45] -rw-r--r-- 1 boincer umatlas     21578 Apr 18 12:53 stderr.txt
[2025-04-18 12:53:45] HITS file was successfully produced:
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas 202734616 Apr 18 12:52 shared/HITS.pool.root.1
[2025-04-18 12:53:45]  *** Contents of shared directory: ***
[2025-04-18 12:53:45] total 420080
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas 226013156 Apr 18 11:28 ATLAS.root_0
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:28 start_atlas.sh
[2025-04-18 12:53:45] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 11:28 input.tar.gz
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas 202734616 Apr 18 12:52 HITS.pool.root.1
[2025-04-18 12:53:45] -rw------- 1 boincer umatlas    880640 Apr 18 12:53 result.tar.gz
12:53:47 (27168): run_atlas exited; CPU time 47608.862706
12:53:47 (27168): called boinc_finish(0)

</stderr_txt>
]]>

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