Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:34 (20804): wrapper (7.7.26015): starting
11:28:34 (20804): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 11:28:34] Arguments: --nthreads 8
[2025-04-18 11:28:34] Threads: 8
[2025-04-18 11:28:34] Checking for CVMFS
[2025-04-18 11:28:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 11:28:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 11:28:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 11:28:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 11:28:34] 2.11.2.0 2788 156737 123660 145007 3 56 13247284 20275201 1 130560 0 18669024 99.948 8357958 44767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 11:28:34] CVMFS is ok
[2025-04-18 11:28:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 11:28:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 11:28:35] Further information can be found at the LHC@home message board.
[2025-04-18 11:28:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 11:28:35] Checking for apptainer binary...
[2025-04-18 11:28:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 11:28:35] Running /usr/bin/apptainer --version
[2025-04-18 11:28:35] apptainer version 1.3.2-1.el7
[2025-04-18 11:28:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 11:28:36] c-204-22.aglt2.org
[2025-04-18 11:28:36] apptainer works
[2025-04-18 11:28:36] Set ATHENA_PROC_NUMBER=8
[2025-04-18 11:28:36] Set ATHENA_CORE_NUMBER=8
[2025-04-18 11:28:36] Starting ATLAS job with PandaID=6606459598
[2025-04-18 11:28:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 13:41:41]  *** The last 200 lines of the pilot log: ***
[2025-04-18 13:41:41] 2025-04-18 17:41:27,144 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 13:41:41] 2025-04-18 17:41:27,144 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606459598/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,145 | INFO     | extracted standard info from prmon json
[2025-04-18 13:41:41] 2025-04-18 17:41:27,145 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 13:41:41] 2025-04-18 17:41:27,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 13:41:41] 2025-04-18 17:41:27,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 13:41:41] 2025-04-18 17:41:27,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 13:41:41] 2025-04-18 17:41:27,149 | INFO     | fitting pss+swap vs Time
[2025-04-18 13:41:41] 2025-04-18 17:41:27,149 | INFO     | sum of square deviations: 681212772.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,150 | INFO     | sum of deviations: 23752937467.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,150 | INFO     | mean x: 1744994098.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,150 | INFO     | mean y: 2480942.2846153844
[2025-04-18 13:41:41] 2025-04-18 17:41:27,150 | INFO     | -- intersect: -60843024861.597
[2025-04-18 13:41:41] 2025-04-18 17:41:27,151 | INFO     | intersect: -60843024861.597
[2025-04-18 13:41:41] 2025-04-18 17:41:27,151 | INFO     | chi2: 2.6309049622650345
[2025-04-18 13:41:41] 2025-04-18 17:41:27,151 | INFO     | sum of square deviations: 605592750.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,152 | INFO     | sum of deviations: 22973504752.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,152 | INFO     | mean x: 1744993946.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,152 | INFO     | mean y: 2479369.672
[2025-04-18 13:41:41] 2025-04-18 17:41:27,152 | INFO     | -- intersect: -66194856563.82825
[2025-04-18 13:41:41] 2025-04-18 17:41:27,153 | INFO     | intersect: -66194856563.82825
[2025-04-18 13:41:41] 2025-04-18 17:41:27,153 | INFO     | chi2: 2.63588575773003
[2025-04-18 13:41:41] 2025-04-18 17:41:27,153 | INFO     | current chi2=2.63588575773003 (change=-0.18931871490740887 %)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,153 | INFO     | right removable region: 124
[2025-04-18 13:41:41] 2025-04-18 17:41:27,154 | INFO     | sum of square deviations: 605592750.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,154 | INFO     | sum of deviations: -7242248728.999999
[2025-04-18 13:41:41] 2025-04-18 17:41:27,154 | INFO     | mean x: 1744994251.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,154 | INFO     | mean y: 2543134.848
[2025-04-18 13:41:41] 2025-04-18 17:41:27,155 | INFO     | -- intersect: 20870828622.772114
[2025-04-18 13:41:41] 2025-04-18 17:41:27,155 | INFO     | intersect: 20870828622.772114
[2025-04-18 13:41:41] 2025-04-18 17:41:27,155 | INFO     | chi2: 0.25351439596800657
[2025-04-18 13:41:41] 2025-04-18 17:41:27,155 | INFO     | current chi2=0.25351439596800657 (change=90.36398503160878 %)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,155 | INFO     | sum of square deviations: 535786790.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,156 | INFO     | sum of deviations: -12774589103.499998
[2025-04-18 13:41:41] 2025-04-18 17:41:27,156 | INFO     | mean x: 1744994403.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,156 | INFO     | mean y: 2555070.525
[2025-04-18 13:41:41] 2025-04-18 17:41:27,156 | INFO     | -- intersect: 41607885602.506905
[2025-04-18 13:41:41] 2025-04-18 17:41:27,157 | INFO     | intersect: 41607885602.506905
[2025-04-18 13:41:41] 2025-04-18 17:41:27,157 | INFO     | chi2: 0.1306309405398278
[2025-04-18 13:41:41] 2025-04-18 17:41:27,157 | INFO     | current chi2=0.1306309405398278 (change=48.47198320196642 %)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,157 | INFO     | sum of square deviations: 471562330.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | sum of deviations: -13142880355.000002
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | mean x: 1744994556.0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | mean y: 2555823.4695652174
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | -- intersect: 48637175704.22711
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | intersect: 48637175704.22711
[2025-04-18 13:41:41] 2025-04-18 17:41:27,158 | INFO     | chi2: 0.1079650743745188
[2025-04-18 13:41:41] 2025-04-18 17:41:27,159 | INFO     | current chi2=0.1079650743745188 (change=17.351070176516448 %)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,159 | INFO     | left removable region: 30
[2025-04-18 13:41:41] 2025-04-18 17:41:27,159 | INFO     | sum of square deviations: 257521107.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,159 | INFO     | sum of deviations: -2247178512.000001
[2025-04-18 13:41:41] 2025-04-18 17:41:27,159 | INFO     | mean x: 1744994830.5
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | mean y: 2525129.234042553
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | -- intersect: 15229684272.49256
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | intersect: 15229684272.49256
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | chi2: 0.052311982724251804
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | -- intersect: 15229684272.49256
[2025-04-18 13:41:41] 2025-04-18 17:41:27,160 | INFO     | current memory leak: -8.73 B/s (using 94 data points, chi2=0.05)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | ..............................
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | . Timing measurements:
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | . get job = 0 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | . initial setup = 2 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | . payload setup = 9 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,161 | INFO     | . stage-in = 0 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,162 | INFO     | . payload execution = 7915 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,162 | INFO     | . stage-out = 0 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,162 | INFO     | . log creation = 0 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,162 | INFO     | ..............................
[2025-04-18 13:41:41] 2025-04-18 17:41:27,546 | INFO     | 
[2025-04-18 13:41:41] 2025-04-18 17:41:27,546 | INFO     | job summary report
[2025-04-18 13:41:41] 2025-04-18 17:41:27,552 | INFO     | --------------------------------------------------
[2025-04-18 13:41:41] 2025-04-18 17:41:27,552 | INFO     | PanDA job id: 6606459598
[2025-04-18 13:41:41] 2025-04-18 17:41:27,552 | INFO     | task id: 44075483
[2025-04-18 13:41:41] 2025-04-18 17:41:27,552 | INFO     | errors: (none)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | pilot state: finished 
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | transexitcode: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | exeerrorcode: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | exeerrordiag: 
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | exitcode: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,553 | INFO     | exitmsg: OK
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | cpuconsumptiontime: 55874 s
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | nevents: 400
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | neventsw: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | pid: 30840
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | pgrp: 30840
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | corecount: 8
[2025-04-18 13:41:41] 2025-04-18 17:41:27,554 | INFO     | event service: False
[2025-04-18 13:41:41] 2025-04-18 17:41:27,555 | INFO     | sizes: {0: 2426773, 1: 2426773, 6: 2427007, 11: 2427035, 7928: 2454546, 7929: 2463487, 7932: 2463671, 7938: 2463841}
[2025-04-18 13:41:41] 2025-04-18 17:41:27,555 | INFO     | --------------------------------------------------
[2025-04-18 13:41:41] 2025-04-18 17:41:27,555 | INFO     | 
[2025-04-18 13:41:41] 2025-04-18 17:41:27,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 13:41:41] 2025-04-18 17:41:27,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,587 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 13:41:41] 2025-04-18 17:41:27,587 | INFO     | job 6606459598 has completed (purged errors)
[2025-04-18 13:41:41] 2025-04-18 17:41:27,587 | INFO     | overall cleanup function is called
[2025-04-18 13:41:41] 2025-04-18 17:41:28,596 | INFO     | --- collectZombieJob: --- 10, [30840]
[2025-04-18 13:41:41] 2025-04-18 17:41:28,596 | INFO     | zombie collector waiting for pid 30840
[2025-04-18 13:41:41] 2025-04-18 17:41:28,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 13:41:41] 2025-04-18 17:41:28,597 | INFO     | collected zombie processes
[2025-04-18 13:41:41] 2025-04-18 17:41:28,597 | INFO     | will attempt to kill all subprocesses of pid=30840
[2025-04-18 13:41:41] 2025-04-18 17:41:28,686 | INFO     | process IDs to be killed: [30840] (in reverse order)
[2025-04-18 13:41:41] 2025-04-18 17:41:28,743 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 13:41:41] 2025-04-18 17:41:28,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 13:41:41] 2025-04-18 17:41:28,748 | INFO     | did not find any defunct processes belonging to 30840
[2025-04-18 13:41:41] 2025-04-18 17:41:28,751 | INFO     | did not find any defunct processes belonging to 30840
[2025-04-18 13:41:41] 2025-04-18 17:41:28,751 | INFO     | ready for new job
[2025-04-18 13:41:41] 2025-04-18 17:41:28,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 13:41:41] 2025-04-18 17:41:28,753 | INFO     | **************************************
[2025-04-18 13:41:41] 2025-04-18 17:41:28,754 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 13:41:41] 2025-04-18 17:41:28,754 | INFO     | **************************************
[2025-04-18 13:41:41] 2025-04-18 17:41:28,754 | INFO     | 
[2025-04-18 13:41:41] 2025-04-18 17:41:28,755 | INFO     | architecture information:
[2025-04-18 13:41:41] 2025-04-18 17:41:28,755 | INFO     | executing command: cat /etc/os-release
[2025-04-18 13:41:41] 2025-04-18 17:41:28,773 | INFO     | cat /etc/os-release:
[2025-04-18 13:41:41] NAME="CentOS Linux"
[2025-04-18 13:41:41] VERSION="7 (Core)"
[2025-04-18 13:41:41] ID="centos"
[2025-04-18 13:41:41] ID_LIKE="rhel fedora"
[2025-04-18 13:41:41] VERSION_ID="7"
[2025-04-18 13:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 13:41:41] ANSI_COLOR="0;31"
[2025-04-18 13:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 13:41:41] HOME_URL="https://www.centos.org/"
[2025-04-18 13:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 13:41:41] 
[2025-04-18 13:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 13:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 13:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 13:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 13:41:41] 
[2025-04-18 13:41:41] 2025-04-18 17:41:28,774 | INFO     | **************************************
[2025-04-18 13:41:41] 2025-04-18 17:41:29,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 13:41:41] 2025-04-18 17:41:29,296 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-04-18 13:41:41] 2025-04-18 17:41:29,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 13:41:41] 2025-04-18 17:41:29,297 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 13:41:41] 2025-04-18 17:41:29,297 | INFO     | update_server=False
[2025-04-18 13:41:41] 2025-04-18 17:41:29,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 13:41:41] 2025-04-18 17:41:29,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 13:41:41] 2025-04-18 17:41:29,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:41:41] 2025-04-18 17:41:29,694 | INFO     | aborting loop
[2025-04-18 13:41:41] 2025-04-18 17:41:29,929 | INFO     | all data control threads have been joined
[2025-04-18 13:41:41] 2025-04-18 17:41:30,206 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 13:41:41] 2025-04-18 17:41:30,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 13:41:41] 2025-04-18 17:41:30,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 13:41:41] 2025-04-18 17:41:30,298 | INFO     | [job] retrieve thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:30,304 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:30,597 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:30,697 | INFO     | [job] job monitor thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:30,778 | INFO     | all payload control threads have been joined
[2025-04-18 13:41:41] 2025-04-18 17:41:30,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:30,915 | INFO     | all job control threads have been joined
[2025-04-18 13:41:41] 2025-04-18 17:41:30,935 | INFO     | [data] control thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,157 | INFO     | [payload] failed_post thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,201 | INFO     | [payload] validate_post thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,303 | INFO     | [data] copytool_out thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,475 | INFO     | [job] validate thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,591 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,656 | INFO     | [data] copytool_in thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,781 | INFO     | [payload] control thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:31,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 13:41:41] 2025-04-18 17:41:31,916 | INFO     | [job] control thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:32,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:41:41] 2025-04-18 17:41:33,261 | INFO     | [job] queue monitor thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:35,877 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 13:41:41] 2025-04-18 17:41:36,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624594675520)>', '<ExcThread(monitor, started 140623789152000)>']
[2025-04-18 13:41:41] 2025-04-18 17:41:37,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 13:41:41] 2025-04-18 17:41:37,242 | INFO     | [monitor] control thread has ended
[2025-04-18 13:41:41] 2025-04-18 17:41:41,395 | INFO     | all workflow threads have been joined
[2025-04-18 13:41:41] 2025-04-18 17:41:41,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 13:41:41] 2025-04-18 17:41:41,396 | INFO     | traces error code: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:41,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 13:41:41] 2025-04-18 17:41:41,505 [wrapper] ==== pilot stdout END ====
[2025-04-18 13:41:41] 2025-04-18 17:41:41,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 13:41:41] 2025-04-18 17:41:41,514 [wrapper] pilotpid: 24439
[2025-04-18 13:41:41] 2025-04-18 17:41:41,519 [wrapper] Pilot exit status: 0
[2025-04-18 13:41:41] 2025-04-18 17:41:41,536 [wrapper] pandaids: 6606459598
[2025-04-18 13:41:41] 2025-04-18 17:41:41,583 [wrapper] cleanup supervisor_pilot 18849 24440
[2025-04-18 13:41:41] 2025-04-18 17:41:41,588 [wrapper] Test setup, not cleaning
[2025-04-18 13:41:41] 2025-04-18 17:41:41,593 [wrapper] apfmon messages muted
[2025-04-18 13:41:41] 2025-04-18 17:41:41,597 [wrapper] ==== wrapper stdout END ====
[2025-04-18 13:41:41] 2025-04-18 17:41:41,602 [wrapper] ==== wrapper stderr END ====
[2025-04-18 13:41:41]  *** Error codes and diagnostics ***
[2025-04-18 13:41:41]     "exeErrorCode": 0,
[2025-04-18 13:41:41]     "exeErrorDiag": "",
[2025-04-18 13:41:41]     "pilotErrorCode": 0,
[2025-04-18 13:41:41]     "pilotErrorDiag": "",
[2025-04-18 13:41:41]  *** Listing of results directory ***
[2025-04-18 13:41:41] total 419356
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 08:04 queuedata.json
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 08:04 pilot3.tar.gz
[2025-04-18 13:41:41] -rwx------ 1 boincer umatlas     37140 Apr 18 08:05 runpilot2-wrapper.sh
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas       100 Apr 18 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 13:41:41] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 11:28 run_atlas
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas       105 Apr 18 11:28 job.xml
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas 226013156 Apr 18 11:28 EVNT.44075481._002681.pool.root.1
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:28 start_atlas.sh
[2025-04-18 13:41:41] drwxrwx--x 2 boincer umatlas      4096 Apr 18 11:28 shared
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 11:28 input.tar.gz
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas         0 Apr 18 11:28 boinc_lockfile
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 11:28 pandaJob.out
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas       462 Apr 18 11:28 setup.sh.local
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas    990596 Apr 18 11:28 agis_schedconf.cvmfs.json
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas   1618536 Apr 18 11:28 agis_ddmendpoints.agis.ALL.json
[2025-04-18 13:41:41] drwx------ 4 boincer umatlas      4096 Apr 18 11:28 pilot3
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas      5905 Apr 18 13:38 init_data.xml
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas        95 Apr 18 13:40 pilot_heartbeat.json
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas 197438275 Apr 18 13:40 HITS.44075483._069012.pool.root.1
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas       529 Apr 18 13:41 boinc_task_state.xml
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas      1049 Apr 18 13:41 memory_monitor_summary.json
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 13:41 boinc_mmap_file
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas        27 Apr 18 13:41 wrapper_checkpoint.txt
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas    326159 Apr 18 13:41 log.44075483._069012.job.log.tgz.1
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas      7748 Apr 18 13:41 heartbeat.json
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas      4353 Apr 18 13:41 pilotlog.txt
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas    726639 Apr 18 13:41 log.44075483._069012.job.log.1
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas       357 Apr 18 13:41 output.list
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas       620 Apr 18 13:41 runtime_log
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas   1075200 Apr 18 13:41 result.tar.gz
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas     11388 Apr 18 13:41 runtime_log.err
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas       659 Apr 18 13:41 CkpNDmSezP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiFfLDmIdUKpn.diag
[2025-04-18 13:41:41] -rw-r--r-- 1 boincer umatlas     20756 Apr 18 13:41 stderr.txt
[2025-04-18 13:41:41] HITS file was successfully produced:
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas 197438275 Apr 18 13:40 shared/HITS.pool.root.1
[2025-04-18 13:41:41]  *** Contents of shared directory: ***
[2025-04-18 13:41:41] total 415104
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas 226013156 Apr 18 11:28 ATLAS.root_0
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:28 start_atlas.sh
[2025-04-18 13:41:41] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 11:28 input.tar.gz
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas 197438275 Apr 18 13:40 HITS.pool.root.1
[2025-04-18 13:41:41] -rw------- 1 boincer umatlas   1075200 Apr 18 13:41 result.tar.gz
13:41:43 (20804): run_atlas exited; CPU time 55797.697348
13:41:43 (20804): called boinc_finish(0)

</stderr_txt>
]]>

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