Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:51 (13774): wrapper (7.7.26015): starting
11:36:51 (13774): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 11:36:51] Arguments: --nthreads 12
[2025-04-18 11:36:51] Threads: 12
[2025-04-18 11:36:51] Checking for CVMFS
[2025-04-18 11:36:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 11:36:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 11:36:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 11:36:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 11:36:51] 2.11.2.0 10995 193051 158528 145007 3 56 19171780 20275201 1 130560 0 23033907 99.990 7013343 48711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 11:36:51] CVMFS is ok
[2025-04-18 11:36:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 11:36:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 11:36:51] Further information can be found at the LHC@home message board.
[2025-04-18 11:36:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 11:36:51] Checking for apptainer binary...
[2025-04-18 11:36:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 11:36:51] Running /usr/bin/apptainer --version
[2025-04-18 11:36:51] apptainer version 1.3.2-1.el7
[2025-04-18 11:36:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 11:36:53] c-205-22.aglt2.org
[2025-04-18 11:36:53] apptainer works
[2025-04-18 11:36:53] Set ATHENA_PROC_NUMBER=12
[2025-04-18 11:36:53] Set ATHENA_CORE_NUMBER=12
[2025-04-18 11:36:53] Starting ATLAS job with PandaID=6606432585
[2025-04-18 11:36:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 13:03:17]  *** The last 200 lines of the pilot log: ***
[2025-04-18 13:03:17]  is_tar=False
[2025-04-18 13:03:17]  lfn=log.44075483._068939.job.log.tgz.1
[2025-04-18 13:03:17]  mtime=0
[2025-04-18 13:03:17]  protocol_id=None
[2025-04-18 13:03:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 13:03:17]  replicas=None
[2025-04-18 13:03:17]  scope=mc23_13p6TeV
[2025-04-18 13:03:17]  status=None
[2025-04-18 13:03:17]  status_code=0
[2025-04-18 13:03:17]  storage_token=
[2025-04-18 13:03:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606432585/log.44075483._068939.job.log.tgz.1
[2025-04-18 13:03:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/7c/log.44075483._068939.job.log.tgz.1
[2025-04-18 13:03:17]  workdir=None
[2025-04-18 13:03:17] ]
[2025-04-18 13:03:17] 2025-04-18 17:02:50,626 | INFO     | transferring file log.44075483._068939.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606432585/log.44075483._068939.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 13:03:17] 2025-04-18 17:02:50,626 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606432585/log.44075483._068939.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._068939.job
[2025-04-18 13:03:17] 2025-04-18 17:02:50,646 | INFO     | adding to output.list: log.44075483._068939.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/7c/log.44075483._068939.job.log.tg
[2025-04-18 13:03:17] 2025-04-18 17:02:50,647 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 13:03:17] 2025-04-18 17:02:50,648 | INFO     | summary of transferred files:
[2025-04-18 13:03:17] 2025-04-18 17:02:50,648 | INFO     |  -- lfn=log.44075483._068939.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 13:03:17] 2025-04-18 17:02:50,648 | INFO     | stage-out finished correctly
[2025-04-18 13:03:17] 2025-04-18 17:02:51,720 | WARNING  | process 23788 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 13:03:17] 2025-04-18 17:02:51,720 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606432585/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:03:17] 2025-04-18 17:02:51,808 | INFO     | number of running child processes to parent process 23788: 1
[2025-04-18 13:03:17] 2025-04-18 17:02:51,808 | INFO     | maximum number of monitored processes: 6
[2025-04-18 13:03:17] 2025-04-18 17:02:52,303 | INFO     | PID=17433 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 13:03:17] 2025-04-18 17:02:52,963 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 13:03:17] 2025-04-18 17:02:53,513 | INFO     | job 6606432585 has state=finished
[2025-04-18 13:03:17] 2025-04-18 17:02:53,513 | INFO     | preparing for final server update for job 6606432585 in state='finished'
[2025-04-18 13:03:17] 2025-04-18 17:02:53,514 | INFO     | this job has now completed (state=finished)
[2025-04-18 13:03:17] 2025-04-18 17:02:53,514 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 13:03:17] 2025-04-18 17:02:53,514 | INFO     | log transfer has been attempted: DONE
[2025-04-18 13:03:17] 2025-04-18 17:02:53,514 | INFO     | job 6606432585 has finished - writing final server update
[2025-04-18 13:03:17] 2025-04-18 17:02:53,514 | INFO     | total number of processed events: 400 (read)
[2025-04-18 13:03:17] 2025-04-18 17:02:53,515 | INFO     | executing command: lscpu
[2025-04-18 13:03:17] 2025-04-18 17:02:53,542 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 13:03:17] 2025-04-18 17:02:54,311 | INFO     | monitor loop #384: job 0:6606432585 is in state 'finished'
[2025-04-18 13:03:17] 2025-04-18 17:02:54,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 13:03:17] 2025-04-18 17:02:56,815 | INFO     | monitor loop #385: job 0:6606432585 is in state 'finished'
[2025-04-18 13:03:17] 2025-04-18 17:02:56,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,454 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 13:03:17] 2025-04-18 17:02:58,455 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606432585/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,456 | INFO     | extracted standard info from prmon json
[2025-04-18 13:03:17] 2025-04-18 17:02:58,456 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 13:03:17] 2025-04-18 17:02:58,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 13:03:17] 2025-04-18 17:02:58,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 13:03:17] 2025-04-18 17:02:58,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 13:03:17] 2025-04-18 17:02:58,459 | INFO     | fitting pss+swap vs Time
[2025-04-18 13:03:17] 2025-04-18 17:02:58,460 | INFO     | sum of square deviations: 141539398.0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,460 | INFO     | sum of deviations: 19382906343.0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,460 | INFO     | mean x: 1744993278.0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,460 | INFO     | mean y: 2566336.8571428573
[2025-04-18 13:03:17] 2025-04-18 17:02:58,461 | INFO     | -- intersect: -238962992048.7915
[2025-04-18 13:03:17] 2025-04-18 17:02:58,461 | INFO     | intersect: -238962992048.7915
[2025-04-18 13:03:17] 2025-04-18 17:02:58,461 | INFO     | chi2: 2.133657234598539
[2025-04-18 13:03:17] 2025-04-18 17:02:58,461 | INFO     | -- intersect: -238962992048.7915
[2025-04-18 13:03:17] 2025-04-18 17:02:58,462 | INFO     | current memory leak: 136.94 B/s (using 77 data points, chi2=2.13)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,462 | INFO     | ..............................
[2025-04-18 13:03:17] 2025-04-18 17:02:58,462 | INFO     | . Timing measurements:
[2025-04-18 13:03:17] 2025-04-18 17:02:58,462 | INFO     | . get job = 0 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,462 | INFO     | . initial setup = 2 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | . payload setup = 7 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | . stage-in = 0 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | . payload execution = 5116 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | . stage-out = 0 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | . log creation = 0 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,463 | INFO     | ..............................
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | 
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | job summary report
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | --------------------------------------------------
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | PanDA job id: 6606432585
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | task id: 44075483
[2025-04-18 13:03:17] 2025-04-18 17:02:58,551 | INFO     | errors: (none)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | pilot state: finished 
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | transexitcode: 0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | exeerrorcode: 0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | exeerrordiag: 
[2025-04-18 13:03:17] 2025-04-18 17:02:58,552 | INFO     | exitcode: 0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | exitmsg: OK
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | cpuconsumptiontime: 48139 s
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | nevents: 400
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | neventsw: 0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | pid: 23788
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | pgrp: 23788
[2025-04-18 13:03:17] 2025-04-18 17:02:58,553 | INFO     | corecount: 12
[2025-04-18 13:03:17] 2025-04-18 17:02:58,554 | INFO     | event service: False
[2025-04-18 13:03:17] 2025-04-18 17:02:58,554 | INFO     | sizes: {0: 2426652, 1: 2426851, 6: 2427057, 12: 2427085, 5127: 2453291, 5128: 2453290, 5129: 2462415, 5131: 2462471, 5137: 2462641}
[2025-04-18 13:03:17] 2025-04-18 17:02:58,554 | INFO     | --------------------------------------------------
[2025-04-18 13:03:17] 2025-04-18 17:02:58,554 | INFO     | 
[2025-04-18 13:03:17] 2025-04-18 17:02:58,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 13:03:17] 2025-04-18 17:02:58,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 13:03:17] 2025-04-18 17:02:58,580 | INFO     | job 6606432585 has completed (purged errors)
[2025-04-18 13:03:17] 2025-04-18 17:02:58,580 | INFO     | overall cleanup function is called
[2025-04-18 13:03:17] 2025-04-18 17:02:59,589 | INFO     | --- collectZombieJob: --- 10, [23788]
[2025-04-18 13:03:17] 2025-04-18 17:02:59,589 | INFO     | zombie collector waiting for pid 23788
[2025-04-18 13:03:17] 2025-04-18 17:02:59,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 13:03:17] 2025-04-18 17:02:59,589 | INFO     | collected zombie processes
[2025-04-18 13:03:17] 2025-04-18 17:02:59,589 | INFO     | will attempt to kill all subprocesses of pid=23788
[2025-04-18 13:03:17] 2025-04-18 17:02:59,683 | INFO     | process IDs to be killed: [23788] (in reverse order)
[2025-04-18 13:03:17] 2025-04-18 17:02:59,733 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 13:03:17] 2025-04-18 17:02:59,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 13:03:17] 2025-04-18 17:02:59,736 | INFO     | did not find any defunct processes belonging to 23788
[2025-04-18 13:03:17] 2025-04-18 17:02:59,738 | INFO     | did not find any defunct processes belonging to 23788
[2025-04-18 13:03:17] 2025-04-18 17:02:59,739 | INFO     | ready for new job
[2025-04-18 13:03:17] 2025-04-18 17:02:59,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 13:03:17] 2025-04-18 17:02:59,740 | INFO     | **************************************
[2025-04-18 13:03:17] 2025-04-18 17:02:59,740 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 13:03:17] 2025-04-18 17:02:59,740 | INFO     | **************************************
[2025-04-18 13:03:17] 2025-04-18 17:02:59,740 | INFO     | 
[2025-04-18 13:03:17] 2025-04-18 17:02:59,741 | INFO     | architecture information:
[2025-04-18 13:03:17] 2025-04-18 17:02:59,741 | INFO     | executing command: cat /etc/os-release
[2025-04-18 13:03:17] 2025-04-18 17:02:59,755 | INFO     | cat /etc/os-release:
[2025-04-18 13:03:17] NAME="CentOS Linux"
[2025-04-18 13:03:17] VERSION="7 (Core)"
[2025-04-18 13:03:17] ID="centos"
[2025-04-18 13:03:17] ID_LIKE="rhel fedora"
[2025-04-18 13:03:17] VERSION_ID="7"
[2025-04-18 13:03:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 13:03:17] ANSI_COLOR="0;31"
[2025-04-18 13:03:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 13:03:17] HOME_URL="https://www.centos.org/"
[2025-04-18 13:03:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 13:03:17] 
[2025-04-18 13:03:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 13:03:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 13:03:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 13:03:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 13:03:17] 
[2025-04-18 13:03:17] 2025-04-18 17:02:59,755 | INFO     | **************************************
[2025-04-18 13:03:17] 2025-04-18 17:03:00,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 13:03:17] 2025-04-18 17:03:00,274 | INFO     | sufficient remaining disk space (29402071040 B)
[2025-04-18 13:03:17] 2025-04-18 17:03:00,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 13:03:17] 2025-04-18 17:03:00,275 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 13:03:17] 2025-04-18 17:03:00,275 | INFO     | update_server=False
[2025-04-18 13:03:17] 2025-04-18 17:03:00,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 13:03:17] 2025-04-18 17:03:00,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:03:17] 2025-04-18 17:03:00,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 13:03:17] 2025-04-18 17:03:00,324 | INFO     | aborting loop
[2025-04-18 13:03:17] 2025-04-18 17:03:00,324 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 13:03:17] 2025-04-18 17:03:00,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 13:03:17] 2025-04-18 17:03:00,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 13:03:17] 2025-04-18 17:03:00,523 | INFO     | all data control threads have been joined
[2025-04-18 13:03:17] 2025-04-18 17:03:00,563 | INFO     | all job control threads have been joined
[2025-04-18 13:03:17] 2025-04-18 17:03:01,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 13:03:17] 2025-04-18 17:03:01,280 | INFO     | [job] retrieve thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,281 | INFO     | [job] queue monitor thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,314 | INFO     | all payload control threads have been joined
[2025-04-18 13:03:17] 2025-04-18 17:03:01,329 | INFO     | [job] job monitor thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,332 | INFO     | [payload] failed_post thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,415 | INFO     | [job] validate thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,529 | INFO     | [data] control thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,569 | INFO     | [job] control thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,598 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,781 | INFO     | [payload] validate_post thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,807 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:01,903 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:02,059 | INFO     | [data] copytool_in thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:02,320 | INFO     | [payload] control thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:03,253 | INFO     | [data] copytool_out thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:03,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 13:03:17] 2025-04-18 17:03:07,562 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:11,013 | INFO     | job.realtimelogging is not enabled
[2025-04-18 13:03:17] 2025-04-18 17:03:12,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 13:03:17] 2025-04-18 17:03:12,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866864883520)>', '<ExcThread(monitor, started 139866029397760)>']
[2025-04-18 13:03:17] 2025-04-18 17:03:12,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 13:03:17] 2025-04-18 17:03:12,386 | INFO     | [monitor] control thread has ended
[2025-04-18 13:03:17] 2025-04-18 17:03:17,209 | INFO     | all workflow threads have been joined
[2025-04-18 13:03:17] 2025-04-18 17:03:17,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 13:03:17] 2025-04-18 17:03:17,210 | INFO     | traces error code: 0
[2025-04-18 13:03:17] 2025-04-18 17:03:17,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 13:03:17] 2025-04-18 17:03:17,301 [wrapper] ==== pilot stdout END ====
[2025-04-18 13:03:17] 2025-04-18 17:03:17,305 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 13:03:17] 2025-04-18 17:03:17,309 [wrapper] pilotpid: 17433
[2025-04-18 13:03:17] 2025-04-18 17:03:17,313 [wrapper] Pilot exit status: 0
[2025-04-18 13:03:17] 2025-04-18 17:03:17,329 [wrapper] pandaids: 6606432585
[2025-04-18 13:03:17] 2025-04-18 17:03:17,368 [wrapper] cleanup supervisor_pilot  4746 17434
[2025-04-18 13:03:17] 2025-04-18 17:03:17,372 [wrapper] Test setup, not cleaning
[2025-04-18 13:03:17] 2025-04-18 17:03:17,376 [wrapper] apfmon messages muted
[2025-04-18 13:03:17] 2025-04-18 17:03:17,380 [wrapper] ==== wrapper stdout END ====
[2025-04-18 13:03:17] 2025-04-18 17:03:17,384 [wrapper] ==== wrapper stderr END ====
[2025-04-18 13:03:17]  *** Error codes and diagnostics ***
[2025-04-18 13:03:17]     "exeErrorCode": 0,
[2025-04-18 13:03:17]     "exeErrorDiag": "",
[2025-04-18 13:03:17]     "pilotErrorCode": 0,
[2025-04-18 13:03:17]     "pilotErrorDiag": "",
[2025-04-18 13:03:17]  *** Listing of results directory ***
[2025-04-18 13:03:17] total 411856
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 07:43 pilot3.tar.gz
[2025-04-18 13:03:17] -rwx------ 1 boincer umatlas     37140 Apr 18 07:59 runpilot2-wrapper.sh
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 07:59 queuedata.json
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas       100 Apr 18 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 13:03:17] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 11:36 run_atlas
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas       105 Apr 18 11:36 job.xml
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas 222147143 Apr 18 11:36 EVNT.44075481._002678.pool.root.1
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:36 start_atlas.sh
[2025-04-18 13:03:17] drwxrwx--x 2 boincer umatlas      4096 Apr 18 11:36 shared
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 11:36 input.tar.gz
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas         0 Apr 18 11:36 boinc_lockfile
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 11:36 pandaJob.out
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas       424 Apr 18 11:36 setup.sh.local
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas    990596 Apr 18 11:37 agis_schedconf.cvmfs.json
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas   1618536 Apr 18 11:37 agis_ddmendpoints.agis.ALL.json
[2025-04-18 13:03:17] drwx------ 4 boincer umatlas      4096 Apr 18 11:37 pilot3
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 12:56 init_data.xml
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas        95 Apr 18 13:02 pilot_heartbeat.json
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas 194017299 Apr 18 13:02 HITS.44075483._068939.pool.root.1
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas       529 Apr 18 13:02 boinc_task_state.xml
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas      1062 Apr 18 13:02 memory_monitor_summary.json
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas    371900 Apr 18 13:02 log.44075483._068939.job.log.tgz.1
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas      7753 Apr 18 13:02 heartbeat.json
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 13:03 boinc_mmap_file
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas        27 Apr 18 13:03 wrapper_checkpoint.txt
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas      4425 Apr 18 13:03 pilotlog.txt
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas    486259 Apr 18 13:03 log.44075483._068939.job.log.1
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas       357 Apr 18 13:03 output.list
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas       620 Apr 18 13:03 runtime_log
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas    880640 Apr 18 13:03 result.tar.gz
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas       658 Apr 18 13:03 l79LDmTYzP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGFfLDmhTHAen.diag
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 13:03 runtime_log.err
[2025-04-18 13:03:17] -rw-r--r-- 1 boincer umatlas     21580 Apr 18 13:03 stderr.txt
[2025-04-18 13:03:17] HITS file was successfully produced:
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas 194017299 Apr 18 13:02 shared/HITS.pool.root.1
[2025-04-18 13:03:17]  *** Contents of shared directory: ***
[2025-04-18 13:03:17] total 407796
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas 222147143 Apr 18 11:36 ATLAS.root_0
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:36 start_atlas.sh
[2025-04-18 13:03:17] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 11:36 input.tar.gz
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas 194017299 Apr 18 13:02 HITS.pool.root.1
[2025-04-18 13:03:17] -rw------- 1 boincer umatlas    880640 Apr 18 13:03 result.tar.gz
13:03:19 (13774): run_atlas exited; CPU time 48120.189538
13:03:19 (13774): called boinc_finish(0)

</stderr_txt>
]]>

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