Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:30:50 (7582): wrapper (7.7.26015): starting
11:30:50 (7582): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 11:30:50] Arguments: --nthreads 12
[2025-04-18 11:30:50] Threads: 12
[2025-04-18 11:30:50] Checking for CVMFS
[2025-04-18 11:30:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 11:30:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 11:30:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 11:30:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 11:30:51] 2.11.2.0 28060 385801 170428 145007 3 56 10317698 20275201 1 130560 0 23029079 99.970 7479043 53822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 11:30:51] CVMFS is ok
[2025-04-18 11:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 11:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 11:30:51] Further information can be found at the LHC@home message board.
[2025-04-18 11:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 11:30:51] Checking for apptainer binary...
[2025-04-18 11:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 11:30:51] Running /usr/bin/apptainer --version
[2025-04-18 11:30:51] apptainer version 1.3.2-1.el7
[2025-04-18 11:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 11:30:52] c-205-23.aglt2.org
[2025-04-18 11:30:52] apptainer works
[2025-04-18 11:30:52] Set ATHENA_PROC_NUMBER=12
[2025-04-18 11:30:52] Set ATHENA_CORE_NUMBER=12
[2025-04-18 11:30:52] Starting ATLAS job with PandaID=6604465360
[2025-04-18 11:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 12:58:17]  *** The last 200 lines of the pilot log: ***
[2025-04-18 12:58:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 12:58:17]  is_altstaged=None
[2025-04-18 12:58:17]  is_tar=False
[2025-04-18 12:58:17]  lfn=log.44075483._044927.job.log.tgz.1
[2025-04-18 12:58:17]  mtime=0
[2025-04-18 12:58:17]  protocol_id=None
[2025-04-18 12:58:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 12:58:17]  replicas=None
[2025-04-18 12:58:17]  scope=mc23_13p6TeV
[2025-04-18 12:58:17]  status=None
[2025-04-18 12:58:17]  status_code=0
[2025-04-18 12:58:17]  storage_token=
[2025-04-18 12:58:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6604465360/log.44075483._044927.job.log.tgz.1
[2025-04-18 12:58:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/16/log.44075483._044927.job.log.tgz.1
[2025-04-18 12:58:17]  workdir=None
[2025-04-18 12:58:17] ]
[2025-04-18 12:58:17] 2025-04-18 16:57:50,516 | INFO     | transferring file log.44075483._044927.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6604465360/log.44075483._044927.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 12:58:17] 2025-04-18 16:57:50,516 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6604465360/log.44075483._044927.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._044927.job
[2025-04-18 12:58:17] 2025-04-18 16:57:50,537 | INFO     | adding to output.list: log.44075483._044927.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/16/log.44075483._044927.job.log.tg
[2025-04-18 12:58:17] 2025-04-18 16:57:50,538 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 12:58:17] 2025-04-18 16:57:50,538 | INFO     | summary of transferred files:
[2025-04-18 12:58:17] 2025-04-18 16:57:50,538 | INFO     |  -- lfn=log.44075483._044927.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 12:58:17] 2025-04-18 16:57:50,539 | INFO     | stage-out finished correctly
[2025-04-18 12:58:17] 2025-04-18 16:57:51,526 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 12:58:17] 2025-04-18 16:57:53,525 | INFO     | job 6604465360 has state=finished
[2025-04-18 12:58:17] 2025-04-18 16:57:53,525 | INFO     | preparing for final server update for job 6604465360 in state='finished'
[2025-04-18 12:58:17] 2025-04-18 16:57:53,590 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-18 12:58:17] 2025-04-18 16:57:53,590 | INFO     | this job has now completed (state=finished)
[2025-04-18 12:58:17] 2025-04-18 16:57:53,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 12:58:17] 2025-04-18 16:57:53,590 | INFO     | log transfer has been attempted: DONE
[2025-04-18 12:58:17] 2025-04-18 16:57:53,590 | INFO     | job 6604465360 has finished - writing final server update
[2025-04-18 12:58:17] 2025-04-18 16:57:53,591 | INFO     | total number of processed events: 400 (read)
[2025-04-18 12:58:17] 2025-04-18 16:57:53,592 | INFO     | executing command: lscpu
[2025-04-18 12:58:17] 2025-04-18 16:57:53,620 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 12:58:17] 2025-04-18 16:57:56,749 | WARNING  | process 17617 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 12:58:17] 2025-04-18 16:57:56,750 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604465360/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:58:17] 2025-04-18 16:57:56,841 | INFO     | number of running child processes to parent process 17617: 1
[2025-04-18 12:58:17] 2025-04-18 16:57:56,841 | INFO     | maximum number of monitored processes: 6
[2025-04-18 12:58:17] 2025-04-18 16:57:58,344 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 12:58:17] 2025-04-18 16:57:58,345 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604465360/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:58:17] 2025-04-18 16:57:58,346 | INFO     | extracted standard info from prmon json
[2025-04-18 12:58:17] 2025-04-18 16:57:58,346 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 12:58:17] 2025-04-18 16:57:58,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 12:58:17] 2025-04-18 16:57:58,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 12:58:17] 2025-04-18 16:57:58,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 12:58:17] 2025-04-18 16:57:58,349 | INFO     | fitting pss+swap vs Time
[2025-04-18 12:58:17] 2025-04-18 16:57:58,349 | INFO     | sum of square deviations: 147126479.5
[2025-04-18 12:58:17] 2025-04-18 16:57:58,349 | INFO     | sum of deviations: 18162912534.5
[2025-04-18 12:58:17] 2025-04-18 16:57:58,349 | INFO     | mean x: 1744992948.5
[2025-04-18 12:58:17] 2025-04-18 16:57:58,350 | INFO     | mean y: 2598908.0384615385
[2025-04-18 12:58:17] 2025-04-18 16:57:58,350 | INFO     | -- intersect: -215418543531.00674
[2025-04-18 12:58:17] 2025-04-18 16:57:58,350 | INFO     | intersect: -215418543531.00674
[2025-04-18 12:58:17] 2025-04-18 16:57:58,350 | INFO     | chi2: 2.257710622956035
[2025-04-18 12:58:17] 2025-04-18 16:57:58,350 | INFO     | -- intersect: -215418543531.00674
[2025-04-18 12:58:17] 2025-04-18 16:57:58,351 | INFO     | current memory leak: 123.45 B/s (using 78 data points, chi2=2.26)
[2025-04-18 12:58:17] 2025-04-18 16:57:58,351 | INFO     | ..............................
[2025-04-18 12:58:17] 2025-04-18 16:57:58,351 | INFO     | . Timing measurements:
[2025-04-18 12:58:17] 2025-04-18 16:57:58,351 | INFO     | . get job = 0 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,352 | INFO     | . initial setup = 2 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,352 | INFO     | . payload setup = 7 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,352 | INFO     | . stage-in = 0 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,352 | INFO     | . payload execution = 5179 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,352 | INFO     | . stage-out = 0 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,353 | INFO     | . log creation = 0 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,353 | INFO     | ..............................
[2025-04-18 12:58:17] 2025-04-18 16:57:58,447 | INFO     | PID=11244 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,781 | INFO     | 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,781 | INFO     | job summary report
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | --------------------------------------------------
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | PanDA job id: 6604465360
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | task id: 44075483
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | errors: (none)
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,782 | INFO     | pilot state: finished 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | transexitcode: 0
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | exeerrorcode: 0
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | exeerrordiag: 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | exitcode: 0
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | exitmsg: OK
[2025-04-18 12:58:17] 2025-04-18 16:57:58,783 | INFO     | cpuconsumptiontime: 49069 s
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | nevents: 400
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | neventsw: 0
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | pid: 17617
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | pgrp: 17617
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | corecount: 12
[2025-04-18 12:58:17] 2025-04-18 16:57:58,784 | INFO     | event service: False
[2025-04-18 12:58:17] 2025-04-18 16:57:58,785 | INFO     | sizes: {0: 2426653, 1: 2426852, 6: 2427058, 11: 2427086, 5187: 2453291, 5189: 2462232, 5190: 2462416, 5197: 2462586}
[2025-04-18 12:58:17] 2025-04-18 16:57:58,785 | INFO     | --------------------------------------------------
[2025-04-18 12:58:17] 2025-04-18 16:57:58,785 | INFO     | 
[2025-04-18 12:58:17] 2025-04-18 16:57:58,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 12:58:17] 2025-04-18 16:57:58,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 12:58:17] 2025-04-18 16:57:58,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 12:58:17] 2025-04-18 16:57:58,814 | INFO     | job 6604465360 has completed (purged errors)
[2025-04-18 12:58:17] 2025-04-18 16:57:58,814 | INFO     | overall cleanup function is called
[2025-04-18 12:58:17] 2025-04-18 16:57:59,822 | INFO     | --- collectZombieJob: --- 10, [17617]
[2025-04-18 12:58:17] 2025-04-18 16:57:59,823 | INFO     | zombie collector waiting for pid 17617
[2025-04-18 12:58:17] 2025-04-18 16:57:59,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 12:58:17] 2025-04-18 16:57:59,823 | INFO     | collected zombie processes
[2025-04-18 12:58:17] 2025-04-18 16:57:59,823 | INFO     | will attempt to kill all subprocesses of pid=17617
[2025-04-18 12:58:17] 2025-04-18 16:57:59,917 | INFO     | process IDs to be killed: [17617] (in reverse order)
[2025-04-18 12:58:17] 2025-04-18 16:57:59,969 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 12:58:17] 2025-04-18 16:57:59,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 12:58:17] 2025-04-18 16:57:59,973 | INFO     | did not find any defunct processes belonging to 17617
[2025-04-18 12:58:17] 2025-04-18 16:57:59,977 | INFO     | did not find any defunct processes belonging to 17617
[2025-04-18 12:58:17] 2025-04-18 16:57:59,977 | INFO     | ready for new job
[2025-04-18 12:58:17] 2025-04-18 16:57:59,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 12:58:17] 2025-04-18 16:57:59,978 | INFO     | **************************************
[2025-04-18 12:58:17] 2025-04-18 16:57:59,979 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 12:58:17] 2025-04-18 16:57:59,979 | INFO     | **************************************
[2025-04-18 12:58:17] 2025-04-18 16:57:59,979 | INFO     | 
[2025-04-18 12:58:17] 2025-04-18 16:57:59,979 | INFO     | architecture information:
[2025-04-18 12:58:17] 2025-04-18 16:57:59,980 | INFO     | executing command: cat /etc/os-release
[2025-04-18 12:58:17] 2025-04-18 16:57:59,996 | INFO     | cat /etc/os-release:
[2025-04-18 12:58:17] NAME="CentOS Linux"
[2025-04-18 12:58:17] VERSION="7 (Core)"
[2025-04-18 12:58:17] ID="centos"
[2025-04-18 12:58:17] ID_LIKE="rhel fedora"
[2025-04-18 12:58:17] VERSION_ID="7"
[2025-04-18 12:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 12:58:17] ANSI_COLOR="0;31"
[2025-04-18 12:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 12:58:17] HOME_URL="https://www.centos.org/"
[2025-04-18 12:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 12:58:17] 
[2025-04-18 12:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 12:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 12:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 12:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 12:58:17] 
[2025-04-18 12:58:17] 2025-04-18 16:57:59,997 | INFO     | **************************************
[2025-04-18 12:58:17] 2025-04-18 16:58:00,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 12:58:17] 2025-04-18 16:58:00,518 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-04-18 12:58:17] 2025-04-18 16:58:00,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 12:58:17] 2025-04-18 16:58:00,519 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 12:58:17] 2025-04-18 16:58:00,519 | INFO     | update_server=False
[2025-04-18 12:58:17] 2025-04-18 16:58:00,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 12:58:17] 2025-04-18 16:58:00,519 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 12:58:17] 2025-04-18 16:58:00,520 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 12:58:17] 2025-04-18 16:58:00,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 12:58:17] 2025-04-18 16:58:00,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 12:58:17] 2025-04-18 16:58:00,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:58:17] 2025-04-18 16:58:00,520 | INFO     | aborting loop
[2025-04-18 12:58:17] 2025-04-18 16:58:01,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 12:58:17] 2025-04-18 16:58:01,449 | INFO     | all payload control threads have been joined
[2025-04-18 12:58:17] 2025-04-18 16:58:01,524 | INFO     | [job] retrieve thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:01,525 | INFO     | [job] job monitor thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:01,555 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:01,584 | INFO     | all data control threads have been joined
[2025-04-18 12:58:17] 2025-04-18 16:58:01,910 | INFO     | all job control threads have been joined
[2025-04-18 12:58:17] 2025-04-18 16:58:01,948 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:01,950 | INFO     | [payload] failed_post thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 12:58:17] 2025-04-18 16:58:02,146 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,303 | INFO     | [data] copytool_in thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,455 | INFO     | [payload] control thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,589 | INFO     | [data] control thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,864 | INFO     | [job] validate thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:02,915 | INFO     | [job] control thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:03,034 | INFO     | [payload] validate_post thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:03,141 | INFO     | [data] copytool_out thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:03,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:58:17] 2025-04-18 16:58:04,456 | INFO     | [job] queue monitor thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:06,124 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:10,987 | INFO     | job.realtimelogging is not enabled
[2025-04-18 12:58:17] 2025-04-18 16:58:11,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 12:58:17] 2025-04-18 16:58:12,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136567134016)>', '<ExcThread(monitor, started 140135807031040)>']
[2025-04-18 12:58:17] 2025-04-18 16:58:12,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 12:58:17] 2025-04-18 16:58:12,582 | INFO     | [monitor] control thread has ended
[2025-04-18 12:58:17] 2025-04-18 16:58:17,545 | INFO     | all workflow threads have been joined
[2025-04-18 12:58:17] 2025-04-18 16:58:17,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 12:58:17] 2025-04-18 16:58:17,545 | INFO     | traces error code: 0
[2025-04-18 12:58:17] 2025-04-18 16:58:17,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 12:58:17] 2025-04-18 16:58:17,643 [wrapper] ==== pilot stdout END ====
[2025-04-18 12:58:17] 2025-04-18 16:58:17,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 12:58:17] 2025-04-18 16:58:17,651 [wrapper] pilotpid: 11244
[2025-04-18 12:58:17] 2025-04-18 16:58:17,655 [wrapper] Pilot exit status: 0
[2025-04-18 12:58:17] 2025-04-18 16:58:17,671 [wrapper] pandaids: 6604465360
[2025-04-18 12:58:17] 2025-04-18 16:58:17,708 [wrapper] cleanup supervisor_pilot 27748 11245
[2025-04-18 12:58:17] 2025-04-18 16:58:17,712 [wrapper] Test setup, not cleaning
[2025-04-18 12:58:17] 2025-04-18 16:58:17,716 [wrapper] apfmon messages muted
[2025-04-18 12:58:17] 2025-04-18 16:58:17,720 [wrapper] ==== wrapper stdout END ====
[2025-04-18 12:58:17] 2025-04-18 16:58:17,724 [wrapper] ==== wrapper stderr END ====
[2025-04-18 12:58:17]  *** Error codes and diagnostics ***
[2025-04-18 12:58:17]     "exeErrorCode": 0,
[2025-04-18 12:58:17]     "exeErrorDiag": "",
[2025-04-18 12:58:17]     "pilotErrorCode": 0,
[2025-04-18 12:58:17]     "pilotErrorDiag": "",
[2025-04-18 12:58:17]  *** Listing of results directory ***
[2025-04-18 12:58:17] total 422760
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 15:31 pilot3.tar.gz
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 15:35 queuedata.json
[2025-04-18 12:58:17] -rwx------ 1 boincer umatlas     37140 Apr 16 15:36 runpilot2-wrapper.sh
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas       100 Apr 18 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 12:58:17] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 11:30 run_atlas
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas       105 Apr 18 11:30 job.xml
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas 225418071 Apr 18 11:30 EVNT.44075481._001757.pool.root.1
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:30 start_atlas.sh
[2025-04-18 12:58:17] drwxrwx--x 2 boincer umatlas      4096 Apr 18 11:30 shared
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 11:30 input.tar.gz
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas         0 Apr 18 11:30 boinc_lockfile
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 11:30 pandaJob.out
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas       424 Apr 18 11:30 setup.sh.local
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas    990596 Apr 18 11:31 agis_schedconf.cvmfs.json
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas   1618536 Apr 18 11:31 agis_ddmendpoints.agis.ALL.json
[2025-04-18 12:58:17] drwx------ 4 boincer umatlas      4096 Apr 18 11:31 pilot3
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 12:47 init_data.xml
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas        95 Apr 18 12:57 pilot_heartbeat.json
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas 201900235 Apr 18 12:57 HITS.44075483._044927.pool.root.1
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 12:57 boinc_mmap_file
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas        27 Apr 18 12:57 wrapper_checkpoint.txt
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas       529 Apr 18 12:57 boinc_task_state.xml
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas      1047 Apr 18 12:57 memory_monitor_summary.json
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas    372466 Apr 18 12:57 log.44075483._044927.job.log.tgz.1
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas      7753 Apr 18 12:57 heartbeat.json
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas      4548 Apr 18 12:58 pilotlog.txt
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas    491660 Apr 18 12:58 log.44075483._044927.job.log.1
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas       357 Apr 18 12:58 output.list
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas       620 Apr 18 12:58 runtime_log
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas    880640 Apr 18 12:58 result.tar.gz
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 12:58 runtime_log.err
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas       658 Apr 18 12:58 eGdMDmHkNP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmC3aLDm9tINon.diag
[2025-04-18 12:58:17] -rw-r--r-- 1 boincer umatlas     21435 Apr 18 12:58 stderr.txt
[2025-04-18 12:58:17] HITS file was successfully produced:
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas 201900235 Apr 18 12:57 shared/HITS.pool.root.1
[2025-04-18 12:58:17]  *** Contents of shared directory: ***
[2025-04-18 12:58:17] total 418692
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas 225418071 Apr 18 11:30 ATLAS.root_0
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 11:30 start_atlas.sh
[2025-04-18 12:58:17] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 11:30 input.tar.gz
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas 201900235 Apr 18 12:57 HITS.pool.root.1
[2025-04-18 12:58:17] -rw------- 1 boincer umatlas    880640 Apr 18 12:58 result.tar.gz
12:58:19 (7582): run_atlas exited; CPU time 49046.112997
12:58:19 (7582): called boinc_finish(0)

</stderr_txt>
]]>

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