Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:16:53 (7389): wrapper (7.7.26015): starting
17:16:53 (7389): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 17:16:53] Arguments: --nthreads 12
[2025-04-18 17:16:53] Threads: 12
[2025-04-18 17:16:53] Checking for CVMFS
[2025-04-18 17:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 17:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 17:16:53] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 17:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 17:16:53] 2.11.5.0 4478 1 26796 145005 3 4 3996280 4194304 295 130560 0 3498 99.893 75283 1420 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-18 17:16:53] CVMFS is ok
[2025-04-18 17:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 17:16:53] Checking for apptainer binary...
[2025-04-18 17:16:53] apptainer is not installed, using version from CVMFS
[2025-04-18 17:16:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 17:16:54] mikemint-desktop
[2025-04-18 17:16:54] apptainer works
[2025-04-18 17:16:54] Set ATHENA_PROC_NUMBER=12
[2025-04-18 17:16:54] Set ATHENA_CORE_NUMBER=12
[2025-04-18 17:16:54] Starting ATLAS job with PandaID=6605746103
[2025-04-18 17:16:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 19:01:42]  *** The last 200 lines of the pilot log: ***
[2025-04-18 19:01:42] 2025-04-18 17:01:22,320 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-6605746103/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,321 | INFO     | extracted standard info from prmon json
[2025-04-18 19:01:42] 2025-04-18 17:01:22,321 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 19:01:42] 2025-04-18 17:01:22,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 19:01:42] 2025-04-18 17:01:22,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 19:01:42] 2025-04-18 17:01:22,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 19:01:42] 2025-04-18 17:01:22,324 | INFO     | fitting pss+swap vs Time
[2025-04-18 19:01:42] 2025-04-18 17:01:22,324 | INFO     | sum of square deviations: 329031285.5
[2025-04-18 19:01:42] 2025-04-18 17:01:22,325 | INFO     | sum of deviations: 32938706159.500015
[2025-04-18 19:01:42] 2025-04-18 17:01:22,325 | INFO     | mean x: 1744992582.5
[2025-04-18 19:01:42] 2025-04-18 17:01:22,325 | INFO     | mean y: 2507223.598039216
[2025-04-18 19:01:42] 2025-04-18 17:01:22,325 | INFO     | -- intersect: -174685434192.46097
[2025-04-18 19:01:42] 2025-04-18 17:01:22,325 | INFO     | intersect: -174685434192.46097
[2025-04-18 19:01:42] 2025-04-18 17:01:22,326 | INFO     | chi2: 4.471831020456629
[2025-04-18 19:01:42] 2025-04-18 17:01:22,326 | INFO     | sum of square deviations: 282974608.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,326 | INFO     | sum of deviations: 38226471730.99999
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | mean x: 1744992430.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | mean y: 2523752.3092783503
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | -- intersect: -235725000592.22128
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | intersect: -235725000592.22128
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | chi2: 3.6702133703334714
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | current chi2=3.6702133703334714 (change=17.925937864291274 %)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,327 | INFO     | right removable region: 96
[2025-04-18 19:01:42] 2025-04-18 17:01:22,328 | INFO     | sum of square deviations: 282974608.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,328 | INFO     | sum of deviations: 3804257375.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,328 | INFO     | mean x: 1744992735.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,328 | INFO     | mean y: 2603249.907216495
[2025-04-18 19:01:42] 2025-04-18 17:01:22,328 | INFO     | -- intersect: -23456750677.16023
[2025-04-18 19:01:42] 2025-04-18 17:01:22,329 | INFO     | intersect: -23456750677.16023
[2025-04-18 19:01:42] 2025-04-18 17:01:22,329 | INFO     | chi2: 1.3373550176842035
[2025-04-18 19:01:42] 2025-04-18 17:01:22,329 | INFO     | current chi2=1.3373550176842035 (change=70.09379353632993 %)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,329 | INFO     | sum of square deviations: 241429643.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,329 | INFO     | sum of deviations: -4541291827.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | mean x: 1744992887.5
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | mean y: 2633049.565217391
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | -- intersect: 32825951013.784218
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | intersect: 32825951013.784218
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | chi2: 0.8755010412671226
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | current chi2=0.8755010412671226 (change=34.534881935601405 %)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | sum of square deviations: 204163828.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | sum of deviations: -4796342465.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | mean x: 1744993040.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | mean y: 2634070.4827586208
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | -- intersect: 40997085932.35441
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | intersect: 40997085932.35441
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | chi2: 0.8765889656973637
[2025-04-18 19:01:42] 2025-04-18 17:01:22,330 | INFO     | current chi2=0.8765889656973637 (change=-0.12426306525764007 %)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | left removable region: 30
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | sum of square deviations: 89127252.5
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | sum of deviations: 575193766.0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | mean x: 1744993314.5
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | mean y: 2666110.303030303
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | -- intersect: -11258864432.356495
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | intersect: -11258864432.356495
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | chi2: 0.00010903939211974094
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | -- intersect: -11258864432.356495
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | current memory leak: 6.45 B/s (using 66 data points, chi2=0.00)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | ..............................
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | . Timing measurements:
[2025-04-18 19:01:42] 2025-04-18 17:01:22,331 | INFO     | . get job = 0 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . initial setup = 5 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . payload setup = 13 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . stage-in = 0 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . payload execution = 6181 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . stage-out = 0 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | . log creation = 0 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,332 | INFO     | ..............................
[2025-04-18 19:01:42] 2025-04-18 17:01:22,865 | INFO     | 
[2025-04-18 19:01:42] 2025-04-18 17:01:22,865 | INFO     | job summary report
[2025-04-18 19:01:42] 2025-04-18 17:01:22,865 | INFO     | --------------------------------------------------
[2025-04-18 19:01:42] 2025-04-18 17:01:22,865 | INFO     | PanDA job id: 6605746103
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | task id: 44075483
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | errors: (none)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | pilot state: finished 
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | transexitcode: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | exeerrorcode: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | exeerrordiag: 
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | exitcode: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | exitmsg: OK
[2025-04-18 19:01:42] 2025-04-18 17:01:22,866 | INFO     | cpuconsumptiontime: 45976 s
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | nevents: 400
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | neventsw: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | pid: 242848
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | pgrp: 242848
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | corecount: 12
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | event service: False
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | sizes: {0: 2425996, 1: 2426860, 8: 2427066, 12: 2427094, 6198: 2453968, 6199: 2453967, 6200: 2463108, 6203: 2463164, 6210: 2463334}
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | --------------------------------------------------
[2025-04-18 19:01:42] 2025-04-18 17:01:22,867 | INFO     | 
[2025-04-18 19:01:42] 2025-04-18 17:01:22,868 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2025-04-18 19:01:42] 2025-04-18 17:01:22,890 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 19:01:42] 2025-04-18 17:01:22,893 | INFO     | job 6605746103 has completed (purged errors)
[2025-04-18 19:01:42] 2025-04-18 17:01:22,893 | INFO     | overall cleanup function is called
[2025-04-18 19:01:42] 2025-04-18 17:01:23,901 | INFO     | --- collectZombieJob: --- 10, [242848]
[2025-04-18 19:01:42] 2025-04-18 17:01:23,901 | INFO     | zombie collector waiting for pid 242848
[2025-04-18 19:01:42] 2025-04-18 17:01:23,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 19:01:42] 2025-04-18 17:01:23,901 | INFO     | collected zombie processes
[2025-04-18 19:01:42] 2025-04-18 17:01:23,902 | INFO     | will attempt to kill all subprocesses of pid=242848
[2025-04-18 19:01:42] 2025-04-18 17:01:24,190 | INFO     | process IDs to be killed: [242848] (in reverse order)
[2025-04-18 19:01:42] 2025-04-18 17:01:24,321 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 19:01:42] 2025-04-18 17:01:24,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 19:01:42] 2025-04-18 17:01:24,335 | INFO     | did not find any defunct processes belonging to 242848
[2025-04-18 19:01:42] 2025-04-18 17:01:24,343 | INFO     | did not find any defunct processes belonging to 242848
[2025-04-18 19:01:42] 2025-04-18 17:01:24,343 | INFO     | ready for new job
[2025-04-18 19:01:42] 2025-04-18 17:01:24,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 19:01:42] 2025-04-18 17:01:24,344 | INFO     | **************************************
[2025-04-18 19:01:42] 2025-04-18 17:01:24,344 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 19:01:42] 2025-04-18 17:01:24,344 | INFO     | **************************************
[2025-04-18 19:01:42] 2025-04-18 17:01:24,345 | INFO     | 
[2025-04-18 19:01:42] 2025-04-18 17:01:24,351 | INFO     | architecture information:
[2025-04-18 19:01:42] 2025-04-18 17:01:24,351 | INFO     | executing command: cat /etc/os-release
[2025-04-18 19:01:42] 2025-04-18 17:01:24,365 | INFO     | cat /etc/os-release:
[2025-04-18 19:01:42] NAME="CentOS Linux"
[2025-04-18 19:01:42] VERSION="7 (Core)"
[2025-04-18 19:01:42] ID="centos"
[2025-04-18 19:01:42] ID_LIKE="rhel fedora"
[2025-04-18 19:01:42] VERSION_ID="7"
[2025-04-18 19:01:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 19:01:42] ANSI_COLOR="0;31"
[2025-04-18 19:01:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 19:01:42] HOME_URL="https://www.centos.org/"
[2025-04-18 19:01:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 19:01:42] 
[2025-04-18 19:01:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 19:01:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 19:01:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 19:01:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 19:01:42] 
[2025-04-18 19:01:42] 2025-04-18 17:01:24,366 | INFO     | **************************************
[2025-04-18 19:01:42] 2025-04-18 17:01:24,869 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/11
[2025-04-18 19:01:42] 2025-04-18 17:01:24,888 | INFO     | sufficient remaining disk space (172824199168 B)
[2025-04-18 19:01:42] 2025-04-18 17:01:24,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 19:01:42] 2025-04-18 17:01:24,889 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 19:01:42] 2025-04-18 17:01:24,889 | INFO     | update_server=False
[2025-04-18 19:01:42] 2025-04-18 17:01:24,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 19:01:42] 2025-04-18 17:01:25,090 | INFO     | all data control threads have been joined
[2025-04-18 19:01:42] 2025-04-18 17:01:25,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 19:01:42] 2025-04-18 17:01:25,533 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 19:01:42] 2025-04-18 17:01:25,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 19:01:42] 2025-04-18 17:01:25,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 19:01:42] 2025-04-18 17:01:25,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:01:42] 2025-04-18 17:01:25,641 | INFO     | aborting loop
[2025-04-18 19:01:42] 2025-04-18 17:01:25,893 | INFO     | [job] retrieve thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:25,961 | INFO     | [payload] failed_post thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,033 | INFO     | [job] validate thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,093 | INFO     | [data] control thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,181 | INFO     | all job control threads have been joined
[2025-04-18 19:01:42] 2025-04-18 17:01:26,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 19:01:42] 2025-04-18 17:01:26,205 | INFO     | all payload control threads have been joined
[2025-04-18 19:01:42] 2025-04-18 17:01:26,361 | INFO     | [data] copytool_in thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,647 | INFO     | [job] job monitor thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,686 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:26,966 | INFO     | [payload] validate_post thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:27,009 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:27,108 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:27,185 | INFO     | [job] control thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:27,209 | INFO     | [payload] control thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:27,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:01:42] 2025-04-18 17:01:27,453 | INFO     | [data] copytool_out thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:28,405 | INFO     | [job] queue monitor thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:30,197 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:35,885 | INFO     | job.realtimelogging is not enabled
[2025-04-18 19:01:42] 2025-04-18 17:01:36,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 19:01:42] 2025-04-18 17:01:37,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083883497280)>', '<ExcThread(monitor, started 140083656447744)>']
[2025-04-18 19:01:42] 2025-04-18 17:01:37,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 19:01:42] 2025-04-18 17:01:37,579 | INFO     | [monitor] control thread has ended
[2025-04-18 19:01:42] 2025-04-18 17:01:42,353 | INFO     | all workflow threads have been joined
[2025-04-18 19:01:42] 2025-04-18 17:01:42,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 19:01:42] 2025-04-18 17:01:42,353 | INFO     | traces error code: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:42,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 19:01:42] 2025-04-18 17:01:42,428 [wrapper] ==== pilot stdout END ====
[2025-04-18 19:01:42] 2025-04-18 17:01:42,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 19:01:42] 2025-04-18 17:01:42,435 [wrapper] pilotpid: 92188
[2025-04-18 19:01:42] 2025-04-18 17:01:42,438 [wrapper] Pilot exit status: 0
[2025-04-18 19:01:42] 2025-04-18 17:01:42,451 [wrapper] pandaids: 6605746103
[2025-04-18 19:01:42] 2025-04-18 17:01:42,530 [wrapper] cleanup supervisor_pilot  717395 92198
[2025-04-18 19:01:42] 2025-04-18 17:01:42,534 [wrapper] Test setup, not cleaning
[2025-04-18 19:01:42] 2025-04-18 17:01:42,538 [wrapper] apfmon messages muted
[2025-04-18 19:01:42] 2025-04-18 17:01:42,541 [wrapper] ==== wrapper stdout END ====
[2025-04-18 19:01:42] 2025-04-18 17:01:42,544 [wrapper] ==== wrapper stderr END ====
[2025-04-18 19:01:42]  *** Error codes and diagnostics ***
[2025-04-18 19:01:42]     "exeErrorCode": 0,
[2025-04-18 19:01:42]     "exeErrorDiag": "",
[2025-04-18 19:01:42]     "pilotErrorCode": 0,
[2025-04-18 19:01:42]     "pilotErrorDiag": "",
[2025-04-18 19:01:42]  *** Listing of results directory ***
[2025-04-18 19:01:42] insgesamt 421004
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc    495897 Apr 17 20:29 pilot3.tar.gz
[2025-04-18 19:01:42] -rwx------ 1 boinc boinc     37140 Apr 17 20:40 runpilot2-wrapper.sh
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc      5111 Apr 17 20:40 queuedata.json
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc       100 Apr 18 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 19:01:42] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 17:16 run_atlas
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc       105 Apr 18 17:16 job.xml
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc      6633 Apr 18 17:16 init_data.xml
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc 226784884 Apr 18 17:16 EVNT.44075481._002307.pool.root.1
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc     17569 Apr 18 17:16 start_atlas.sh
[2025-04-18 19:01:42] drwxrwx--x 2 boinc boinc      4096 Apr 18 17:16 shared
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc    508889 Apr 18 17:16 input.tar.gz
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc         0 Apr 18 17:16 boinc_lockfile
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc      2579 Apr 18 17:16 pandaJob.out
[2025-04-18 19:01:42] -rw------- 1 boinc boinc       456 Apr 18 17:16 setup.sh.local
[2025-04-18 19:01:42] -rw------- 1 boinc boinc    990604 Apr 18 17:17 agis_schedconf.cvmfs.json
[2025-04-18 19:01:42] -rw------- 1 boinc boinc   1618536 Apr 18 17:17 agis_ddmendpoints.agis.ALL.json
[2025-04-18 19:01:42] drwx------ 4 boinc boinc      4096 Apr 18 17:17 pilot3
[2025-04-18 19:01:42] -rw------- 1 boinc boinc 198557755 Apr 18 19:00 HITS.44075483._059323.pool.root.1
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc       530 Apr 18 19:00 boinc_task_state.xml
[2025-04-18 19:01:42] -rw------- 1 boinc boinc      1029 Apr 18 19:01 memory_monitor_summary.json
[2025-04-18 19:01:42] -rw------- 1 boinc boinc    385770 Apr 18 19:01 log.44075483._059323.job.log.tgz.1
[2025-04-18 19:01:42] -rw------- 1 boinc boinc        95 Apr 18 19:01 pilot_heartbeat.json
[2025-04-18 19:01:42] -rw------- 1 boinc boinc      7678 Apr 18 19:01 heartbeat.json
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc      8192 Apr 18 19:01 boinc_mmap_file
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc        27 Apr 18 19:01 wrapper_checkpoint.txt
[2025-04-18 19:01:42] -rw------- 1 boinc boinc      4434 Apr 18 19:01 pilotlog.txt
[2025-04-18 19:01:42] -rw------- 1 boinc boinc    563040 Apr 18 19:01 log.44075483._059323.job.log.1
[2025-04-18 19:01:42] -rw------- 1 boinc boinc       357 Apr 18 19:01 output.list
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc       620 Apr 18 19:01 runtime_log
[2025-04-18 19:01:42] -rw------- 1 boinc boinc    962560 Apr 18 19:01 result.tar.gz
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc     11539 Apr 18 19:01 runtime_log.err
[2025-04-18 19:01:42] -rw------- 1 boinc boinc       668 Apr 18 19:01 B1PKDmSLjP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmRI4KDmcAdmUm.diag
[2025-04-18 19:01:42] -rw-r--r-- 1 boinc boinc     20530 Apr 18 19:01 stderr.txt
[2025-04-18 19:01:42] HITS file was successfully produced:
[2025-04-18 19:01:42] -rw------- 1 boinc boinc 198557755 Apr 18 19:00 shared/HITS.pool.root.1
[2025-04-18 19:01:42]  *** Contents of shared directory: ***
[2025-04-18 19:01:42] insgesamt 416848
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc 226784884 Apr 18 17:16 ATLAS.root_0
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc     17569 Apr 18 17:16 start_atlas.sh
[2025-04-18 19:01:42] -rw-r--r-- 2 boinc boinc    508889 Apr 18 17:16 input.tar.gz
[2025-04-18 19:01:42] -rw------- 1 boinc boinc 198557755 Apr 18 19:00 HITS.pool.root.1
[2025-04-18 19:01:42] -rw------- 1 boinc boinc    962560 Apr 18 19:01 result.tar.gz
19:01:44 (7389): run_atlas exited; CPU time 46296.417143
19:01:44 (7389): called boinc_finish(0)

</stderr_txt>
]]>

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