Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:47:14 (785610): wrapper (7.7.26015): starting
02:47:14 (785610): wrapper: running run_atlas (--nthreads 6)
[2025-04-19 02:47:14] Arguments: --nthreads 6
[2025-04-19 02:47:14] Threads: 6
[2025-04-19 02:47:14] Checking for CVMFS
[2025-04-19 02:47:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 02:47:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 02:47:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 02:47:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 02:47:15] 2.11.5.0 362492 1037 64884 145010 1 61 16980445 20971520 929 130560 0 1132406 99.994 238494 72 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-19 02:47:15] CVMFS is ok
[2025-04-19 02:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 02:47:15] Checking for apptainer binary...
[2025-04-19 02:47:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 02:47:15] Running /usr/bin/apptainer --version
[2025-04-19 02:47:15] apptainer version 1.3.6-1.el9
[2025-04-19 02:47:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 02:47:15] testio005
[2025-04-19 02:47:15] apptainer works
[2025-04-19 02:47:15] Set ATHENA_PROC_NUMBER=6
[2025-04-19 02:47:15] Set ATHENA_CORE_NUMBER=6
[2025-04-19 02:47:15] Starting ATLAS job with PandaID=6606430813
[2025-04-19 02:47:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 04:51:20]  *** The last 200 lines of the pilot log: ***
[2025-04-19 04:51:20] 2025-04-18 19:51:07,796 | INFO     | mean x: 1745002100.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,796 | INFO     | mean y: 2360712.183333333
[2025-04-19 04:51:20] 2025-04-18 19:51:07,796 | INFO     | -- intersect: -146125587611.5952
[2025-04-19 04:51:20] 2025-04-18 19:51:07,796 | INFO     | intersect: -146125587611.5952
[2025-04-19 04:51:20] 2025-04-18 19:51:07,797 | INFO     | chi2: 4.855753441130973
[2025-04-19 04:51:20] 2025-04-18 19:51:07,797 | INFO     | sum of square deviations: 471562330.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | sum of deviations: 43277376224.00001
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | mean x: 1745001948.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | mean y: 2356934.895652174
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | -- intersect: -160144247258.88907
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | intersect: -160144247258.88907
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | chi2: 4.849989025656753
[2025-04-19 04:51:20] 2025-04-18 19:51:07,798 | INFO     | current chi2=4.849989025656753 (change=0.1187131007392534 %)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,799 | INFO     | right removable region: 114
[2025-04-19 04:51:20] 2025-04-18 19:51:07,799 | INFO     | sum of square deviations: 471562330.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,799 | INFO     | sum of deviations: 17539967694.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | mean x: 1745002253.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | mean y: 2425260.452173913
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | -- intersect: -64903698906.79676
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | intersect: -64903698906.79676
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | chi2: 2.3539793937642672
[2025-04-19 04:51:20] 2025-04-18 19:51:07,800 | INFO     | current chi2=2.3539793937642672 (change=51.521850886728856 %)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,801 | INFO     | sum of square deviations: 412686807.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,801 | INFO     | sum of deviations: -1704124974.9999979
[2025-04-19 04:51:20] 2025-04-18 19:51:07,801 | INFO     | mean x: 1745002405.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,801 | INFO     | mean y: 2475089.9454545453
[2025-04-19 04:51:20] 2025-04-18 19:51:07,802 | INFO     | -- intersect: 7208186846.669405
[2025-04-19 04:51:20] 2025-04-18 19:51:07,802 | INFO     | intersect: 7208186846.669405
[2025-04-19 04:51:20] 2025-04-18 19:51:07,802 | INFO     | chi2: 1.1369226284017857
[2025-04-19 04:51:20] 2025-04-18 19:51:07,802 | INFO     | current chi2=1.1369226284017857 (change=51.70209937208823 %)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,802 | INFO     | sum of square deviations: 358927660.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,803 | INFO     | sum of deviations: -17745864287.999992
[2025-04-19 04:51:20] 2025-04-18 19:51:07,803 | INFO     | mean x: 1745002558.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,803 | INFO     | mean y: 2520374.342857143
[2025-04-19 04:51:20] 2025-04-18 19:51:07,803 | INFO     | -- intersect: 86277784243.61621
[2025-04-19 04:51:20] 2025-04-18 19:51:07,804 | INFO     | intersect: 86277784243.61621
[2025-04-19 04:51:20] 2025-04-18 19:51:07,804 | INFO     | chi2: 0.15034386288471022
[2025-04-19 04:51:20] 2025-04-18 19:51:07,804 | INFO     | current chi2=0.15034386288471022 (change=86.7762450030523 %)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,804 | INFO     | sum of square deviations: 310052325.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,805 | INFO     | sum of deviations: -15755807089.499998
[2025-04-19 04:51:20] 2025-04-18 19:51:07,805 | INFO     | mean x: 1745002710.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,805 | INFO     | mean y: 2514025.07
[2025-04-19 04:51:20] 2025-04-18 19:51:07,805 | INFO     | -- intersect: 88677630643.8298
[2025-04-19 04:51:20] 2025-04-18 19:51:07,806 | INFO     | intersect: 88677630643.8298
[2025-04-19 04:51:20] 2025-04-18 19:51:07,806 | INFO     | chi2: 0.14073000447954162
[2025-04-19 04:51:20] 2025-04-18 19:51:07,806 | INFO     | current chi2=0.14073000447954162 (change=6.394579878887968 %)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,809 | INFO     | left removable region: 40
[2025-04-19 04:51:20] 2025-04-18 19:51:07,809 | INFO     | sum of square deviations: 125630262.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,809 | INFO     | sum of deviations: -348857292.0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,810 | INFO     | mean x: 1745003137.5
[2025-04-19 04:51:20] 2025-04-18 19:51:07,810 | INFO     | mean y: 2453167.621621622
[2025-04-19 04:51:20] 2025-04-18 19:51:07,810 | INFO     | -- intersect: 4848077597.322656
[2025-04-19 04:51:20] 2025-04-18 19:51:07,810 | INFO     | intersect: 4848077597.322656
[2025-04-19 04:51:20] 2025-04-18 19:51:07,810 | INFO     | chi2: 0.0012792945599736404
[2025-04-19 04:51:20] 2025-04-18 19:51:07,811 | INFO     | -- intersect: 4848077597.322656
[2025-04-19 04:51:20] 2025-04-18 19:51:07,811 | INFO     | current memory leak: -2.78 B/s (using 74 data points, chi2=0.00)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,811 | INFO     | ..............................
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . Timing measurements:
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . get job = 0 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . initial setup = 6 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . payload setup = 4 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . stage-in = 0 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,812 | INFO     | . payload execution = 7313 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,813 | INFO     | . stage-out = 0 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,813 | INFO     | . log creation = 0 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,813 | INFO     | ..............................
[2025-04-19 04:51:20] 2025-04-18 19:51:07,919 | INFO     | 
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | job summary report
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | --------------------------------------------------
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | PanDA job id: 6606430813
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | task id: 44075483
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | errors: (none)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | pilot state: finished 
[2025-04-19 04:51:20] 2025-04-18 19:51:07,920 | INFO     | transexitcode: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | exeerrorcode: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | exeerrordiag: 
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | exitcode: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | exitmsg: OK
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | cpuconsumptiontime: 36781 s
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | nevents: 400
[2025-04-19 04:51:20] 2025-04-18 19:51:07,921 | INFO     | neventsw: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | pid: 795864
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | pgrp: 795864
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | corecount: 6
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | event service: False
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | sizes: {0: 2426824, 4: 2427030, 11: 2427058, 7322: 2454277, 7324: 2463218, 7326: 2463274, 7406: 2463572}
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | --------------------------------------------------
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | 
[2025-04-19 04:51:20] 2025-04-18 19:51:07,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-19 04:51:20] 2025-04-18 19:51:07,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,945 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 04:51:20] 2025-04-18 19:51:07,946 | INFO     | job 6606430813 has completed (purged errors)
[2025-04-19 04:51:20] 2025-04-18 19:51:07,946 | INFO     | overall cleanup function is called
[2025-04-19 04:51:20] 2025-04-18 19:51:08,045 | INFO     | PID=789310 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 04:51:20] 2025-04-18 19:51:08,046 | INFO     | .. there are 2 such processes running
[2025-04-19 04:51:20] 2025-04-18 19:51:08,953 | INFO     | --- collectZombieJob: --- 10, [795864]
[2025-04-19 04:51:20] 2025-04-18 19:51:08,953 | INFO     | zombie collector waiting for pid 795864
[2025-04-19 04:51:20] 2025-04-18 19:51:08,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 04:51:20] 2025-04-18 19:51:08,953 | INFO     | collected zombie processes
[2025-04-19 04:51:20] 2025-04-18 19:51:08,953 | INFO     | will attempt to kill all subprocesses of pid=795864
[2025-04-19 04:51:20] 2025-04-18 19:51:09,058 | INFO     | process IDs to be killed: [795864] (in reverse order)
[2025-04-19 04:51:20] 2025-04-18 19:51:09,109 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 04:51:20] 2025-04-18 19:51:09,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 04:51:20] 2025-04-18 19:51:09,113 | INFO     | did not find any defunct processes belonging to 795864
[2025-04-19 04:51:20] 2025-04-18 19:51:09,116 | INFO     | did not find any defunct processes belonging to 795864
[2025-04-19 04:51:20] 2025-04-18 19:51:09,117 | INFO     | ready for new job
[2025-04-19 04:51:20] 2025-04-18 19:51:09,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 04:51:20] 2025-04-18 19:51:09,118 | INFO     | **************************************
[2025-04-19 04:51:20] 2025-04-18 19:51:09,118 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 04:51:20] 2025-04-18 19:51:09,118 | INFO     | **************************************
[2025-04-19 04:51:20] 2025-04-18 19:51:09,118 | INFO     | 
[2025-04-19 04:51:20] 2025-04-18 19:51:09,119 | INFO     | architecture information:
[2025-04-19 04:51:20] 2025-04-18 19:51:09,120 | INFO     | executing command: cat /etc/os-release
[2025-04-19 04:51:20] 2025-04-18 19:51:09,133 | INFO     | cat /etc/os-release:
[2025-04-19 04:51:20] NAME="CentOS Linux"
[2025-04-19 04:51:20] VERSION="7 (Core)"
[2025-04-19 04:51:20] ID="centos"
[2025-04-19 04:51:20] ID_LIKE="rhel fedora"
[2025-04-19 04:51:20] VERSION_ID="7"
[2025-04-19 04:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 04:51:20] ANSI_COLOR="0;31"
[2025-04-19 04:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 04:51:20] HOME_URL="https://www.centos.org/"
[2025-04-19 04:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 04:51:20] 
[2025-04-19 04:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 04:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 04:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 04:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 04:51:20] 
[2025-04-19 04:51:20] 2025-04-18 19:51:09,133 | INFO     | **************************************
[2025-04-19 04:51:20] 2025-04-18 19:51:09,636 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-19 04:51:20] 2025-04-18 19:51:09,650 | INFO     | sufficient remaining disk space (99696508928 B)
[2025-04-19 04:51:20] 2025-04-18 19:51:09,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 04:51:20] 2025-04-18 19:51:09,650 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 04:51:20] 2025-04-18 19:51:09,650 | INFO     | update_server=False
[2025-04-19 04:51:20] 2025-04-18 19:51:09,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 04:51:20] 2025-04-18 19:51:09,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:51:20] 2025-04-18 19:51:09,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 04:51:20] 2025-04-18 19:51:09,766 | INFO     | all job control threads have been joined
[2025-04-19 04:51:20] 2025-04-18 19:51:09,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:51:20] 2025-04-18 19:51:09,840 | INFO     | aborting loop
[2025-04-19 04:51:20] 2025-04-18 19:51:09,968 | INFO     | all payload control threads have been joined
[2025-04-19 04:51:20] 2025-04-18 19:51:10,051 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 04:51:20] 2025-04-18 19:51:10,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 04:51:20] 2025-04-18 19:51:10,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 04:51:20] 2025-04-18 19:51:10,118 | INFO     | all data control threads have been joined
[2025-04-19 04:51:20] 2025-04-18 19:51:10,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 04:51:20] 2025-04-18 19:51:10,656 | INFO     | [job] retrieve thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:10,656 | INFO     | [job] queue monitor thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:10,771 | INFO     | [job] control thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:10,845 | INFO     | [job] job monitor thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:10,848 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:10,974 | INFO     | [payload] control thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,123 | INFO     | [data] control thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,239 | INFO     | [job] validate thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,458 | INFO     | [data] copytool_in thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,617 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,656 | INFO     | [data] copytool_out thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:11,849 | INFO     | [payload] validate_post thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:12,092 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:12,123 | INFO     | [payload] failed_post thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:14,346 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 04:51:20] 2025-04-18 19:51:15,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485508880192)>', '<ExcThread(monitor, started 140484873803520)>']
[2025-04-19 04:51:20] 2025-04-18 19:51:16,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 04:51:20] 2025-04-18 19:51:16,081 | INFO     | [monitor] control thread has ended
[2025-04-19 04:51:20] 2025-04-18 19:51:20,685 | INFO     | all workflow threads have been joined
[2025-04-19 04:51:20] 2025-04-18 19:51:20,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 04:51:20] 2025-04-18 19:51:20,686 | INFO     | traces error code: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:20,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 04:51:20] 2025-04-18 19:51:20,783 [wrapper] ==== pilot stdout END ====
[2025-04-19 04:51:20] 2025-04-18 19:51:20,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 04:51:20] 2025-04-18 19:51:20,789 [wrapper] pilotpid: 789310
[2025-04-19 04:51:20] 2025-04-18 19:51:20,792 [wrapper] Pilot exit status: 0
[2025-04-19 04:51:20] 2025-04-18 19:51:20,802 [wrapper] pandaids: 6606430813
[2025-04-19 04:51:20] 2025-04-18 19:51:20,833 [wrapper] cleanup supervisor_pilot  836822 789311
[2025-04-19 04:51:20] 2025-04-18 19:51:20,836 [wrapper] Test setup, not cleaning
[2025-04-19 04:51:20] 2025-04-18 19:51:20,839 [wrapper] apfmon messages muted
[2025-04-19 04:51:20] 2025-04-18 19:51:20,842 [wrapper] ==== wrapper stdout END ====
[2025-04-19 04:51:20] 2025-04-18 19:51:20,844 [wrapper] ==== wrapper stderr END ====
[2025-04-19 04:51:20]  *** Error codes and diagnostics ***
[2025-04-19 04:51:20]     "exeErrorCode": 0,
[2025-04-19 04:51:20]     "exeErrorDiag": "",
[2025-04-19 04:51:20]     "pilotErrorCode": 0,
[2025-04-19 04:51:20]     "pilotErrorDiag": "",
[2025-04-19 04:51:20]  *** Listing of results directory ***
[2025-04-19 04:51:20] total 421804
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc      5111 Apr 18 20:31 queuedata.json
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc    495897 Apr 18 20:32 pilot3.tar.gz
[2025-04-19 04:51:20] -rwx------. 1 boinc boinc     37140 Apr 18 20:33 runpilot2-wrapper.sh
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc       100 Apr 19 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 04:51:20] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 02:47 run_atlas
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc       105 Apr 19 02:47 job.xml
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc      9361 Apr 19 02:47 init_data.xml
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc 224757661 Apr 19 02:47 EVNT.44075481._002670.pool.root.1
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc     17569 Apr 19 02:47 start_atlas.sh
[2025-04-19 04:51:20] drwxrwx--x. 2 boinc boinc        68 Apr 19 02:47 shared
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc    508894 Apr 19 02:47 input.tar.gz
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc         0 Apr 19 02:47 boinc_lockfile
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc      2579 Apr 19 02:47 pandaJob.out
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc       424 Apr 19 02:47 setup.sh.local
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc    991292 Apr 19 02:47 agis_schedconf.cvmfs.json
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc   1618536 Apr 19 02:47 agis_ddmendpoints.agis.ALL.json
[2025-04-19 04:51:20] drwx------. 4 boinc boinc      4096 Apr 19 02:47 pilot3
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc 201309573 Apr 19 04:49 HITS.44075483._068741.pool.root.1
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc       529 Apr 19 04:49 boinc_task_state.xml
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc      1018 Apr 19 04:49 memory_monitor_summary.json
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc    303802 Apr 19 04:49 log.44075483._068741.job.log.tgz.1
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc        95 Apr 19 04:50 pilot_heartbeat.json
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc        27 Apr 19 04:50 wrapper_checkpoint.txt
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc      8192 Apr 19 04:50 boinc_mmap_file
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc      7666 Apr 19 04:51 heartbeat.json
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc      4353 Apr 19 04:51 pilotlog.txt
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc    699730 Apr 19 04:51 log.44075483._068741.job.log.1
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc       357 Apr 19 04:51 output.list
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc       620 Apr 19 04:51 runtime_log
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc   1024000 Apr 19 04:51 result.tar.gz
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc     10971 Apr 19 04:51 runtime_log.err
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc       643 Apr 19 04:51 JkbMDmL9yP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWCfLDmAvONun.diag
[2025-04-19 04:51:20] -rw-r--r--. 1 boinc boinc     20475 Apr 19 04:51 stderr.txt
[2025-04-19 04:51:20] HITS file was successfully produced:
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc 201309573 Apr 19 04:49 shared/HITS.pool.root.1
[2025-04-19 04:51:20]  *** Contents of shared directory: ***
[2025-04-19 04:51:20] total 417604
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc 224757661 Apr 19 02:47 ATLAS.root_0
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc     17569 Apr 19 02:47 start_atlas.sh
[2025-04-19 04:51:20] -rw-r--r--. 2 boinc boinc    508894 Apr 19 02:47 input.tar.gz
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc 201309573 Apr 19 04:49 HITS.pool.root.1
[2025-04-19 04:51:20] -rw-------. 1 boinc boinc   1024000 Apr 19 04:51 result.tar.gz
04:51:22 (785610): run_atlas exited; CPU time 36861.449843
04:51:22 (785610): called boinc_finish(0)

</stderr_txt>
]]>

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