Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:21:16 (2075818): wrapper (7.7.26015): starting
02:21:16 (2075818): wrapper: running run_atlas (--nthreads 6)
[2025-04-19 02:21:16] Arguments: --nthreads 6
[2025-04-19 02:21:16] Threads: 6
[2025-04-19 02:21:16] Checking for CVMFS
[2025-04-19 02:21:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 02:21:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 02:21:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 02:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 02:21:17] 2.11.5.0 1671667 709 67592 145010 1 55 13113273 20971520 885 130560 0 1090359 99.995 230762 111 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-19 02:21:17] CVMFS is ok
[2025-04-19 02:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 02:21:17] Checking for apptainer binary...
[2025-04-19 02:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 02:21:17] Running /usr/bin/apptainer --version
[2025-04-19 02:21:17] apptainer version 1.3.6-1.el9
[2025-04-19 02:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 02:21:17] testio006
[2025-04-19 02:21:17] apptainer works
[2025-04-19 02:21:17] Set ATHENA_PROC_NUMBER=6
[2025-04-19 02:21:17] Set ATHENA_CORE_NUMBER=6
[2025-04-19 02:21:17] Starting ATLAS job with PandaID=6603699383
[2025-04-19 02:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 04:00:30]  *** The last 200 lines of the pilot log: ***
[2025-04-19 04:00:30]  domain=
[2025-04-19 04:00:30]  filesize=267437
[2025-04-19 04:00:30]  filetype=log
[2025-04-19 04:00:30]  guid=35787111-a237-4d93-8235-90657620eb5c
[2025-04-19 04:00:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 04:00:30]  is_altstaged=None
[2025-04-19 04:00:30]  is_tar=False
[2025-04-19 04:00:30]  lfn=log.44075483._035043.job.log.tgz.1
[2025-04-19 04:00:30]  mtime=0
[2025-04-19 04:00:30]  protocol_id=None
[2025-04-19 04:00:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 04:00:30]  replicas=None
[2025-04-19 04:00:30]  scope=mc23_13p6TeV
[2025-04-19 04:00:30]  status=None
[2025-04-19 04:00:30]  status_code=0
[2025-04-19 04:00:30]  storage_token=
[2025-04-19 04:00:30]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6603699383/log.44075483._035043.job.log.tgz.1
[2025-04-19 04:00:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/b7/log.44075483._035043.job.log.tgz.1
[2025-04-19 04:00:30]  workdir=None
[2025-04-19 04:00:30] ]
[2025-04-19 04:00:30] 2025-04-18 19:00:13,331 | INFO     | transferring file log.44075483._035043.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6603699383/log.44075483._035043.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 04:00:30] 2025-04-18 19:00:13,331 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6603699383/log.44075483._035043.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._035043.job
[2025-04-19 04:00:30] 2025-04-18 19:00:13,342 | INFO     | adding to output.list: log.44075483._035043.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/b7/log.44075483._035043.job.log.tg
[2025-04-19 04:00:30] 2025-04-18 19:00:13,342 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 04:00:30] 2025-04-18 19:00:13,342 | INFO     | summary of transferred files:
[2025-04-19 04:00:30] 2025-04-18 19:00:13,342 | INFO     |  -- lfn=log.44075483._035043.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 04:00:30] 2025-04-18 19:00:13,343 | INFO     | stage-out finished correctly
[2025-04-19 04:00:30] 2025-04-18 19:00:13,984 | INFO     | monitor loop #434: job 0:6603699383 is in state 'finished'
[2025-04-19 04:00:30] 2025-04-18 19:00:13,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 04:00:30] 2025-04-18 19:00:14,558 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 04:00:30] 2025-04-18 19:00:16,487 | INFO     | monitor loop #435: job 0:6603699383 is in state 'finished'
[2025-04-19 04:00:30] 2025-04-18 19:00:16,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | job 6603699383 has state=finished
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | preparing for final server update for job 6603699383 in state='finished'
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | this job has now completed (state=finished)
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | log transfer has been attempted: DONE
[2025-04-19 04:00:30] 2025-04-18 19:00:16,601 | INFO     | job 6603699383 has finished - writing final server update
[2025-04-19 04:00:30] 2025-04-18 19:00:16,602 | INFO     | total number of processed events: 400 (read)
[2025-04-19 04:00:30] 2025-04-18 19:00:16,602 | INFO     | executing command: lscpu
[2025-04-19 04:00:30] 2025-04-18 19:00:16,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 04:00:30] 2025-04-18 19:00:18,813 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6603699383/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | INFO     | extracted standard info from prmon json
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 04:00:30] 2025-04-18 19:00:18,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 04:00:30] 2025-04-18 19:00:18,815 | INFO     | fitting pss+swap vs Time
[2025-04-19 04:00:30] 2025-04-18 19:00:18,815 | INFO     | sum of square deviations: 226022842.5
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | sum of deviations: 14635640695.999996
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | mean x: 1744999925.5
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | mean y: 2548306.288888889
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | -- intersect: -112991305065.69833
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | intersect: -112991305065.69833
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | chi2: 2.432283655313908
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | -- intersect: -112991305065.69833
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | current memory leak: 64.75 B/s (using 90 data points, chi2=2.43)
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | ..............................
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | . Timing measurements:
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | . get job = 0 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,816 | INFO     | . initial setup = 5 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | . payload setup = 3 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | . stage-in = 0 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | . payload execution = 5904 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | . stage-out = 0 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | . log creation = 0 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,817 | INFO     | ..............................
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | 
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | job summary report
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | --------------------------------------------------
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | PanDA job id: 6603699383
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | task id: 44075483
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | errors: (none)
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | pilot state: finished 
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | transexitcode: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | exeerrorcode: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | exeerrordiag: 
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | exitcode: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | exitmsg: OK
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | cpuconsumptiontime: 29602 s
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | nevents: 400
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | neventsw: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | pid: 2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | pgrp: 2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | corecount: 6
[2025-04-19 04:00:30] 2025-04-18 19:00:18,870 | INFO     | event service: False
[2025-04-19 04:00:30] 2025-04-18 19:00:18,871 | INFO     | sizes: {0: 2426818, 2: 2427024, 11: 2427052, 5911: 2453667, 5913: 2462608, 5914: 2462664, 5919: 2462962}
[2025-04-19 04:00:30] 2025-04-18 19:00:18,871 | INFO     | --------------------------------------------------
[2025-04-19 04:00:30] 2025-04-18 19:00:18,871 | INFO     | 
[2025-04-19 04:00:30] 2025-04-18 19:00:18,871 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | job 6603699383 has completed (purged errors)
[2025-04-19 04:00:30] 2025-04-18 19:00:18,885 | INFO     | overall cleanup function is called
[2025-04-19 04:00:30] 2025-04-18 19:00:19,890 | INFO     | --- collectZombieJob: --- 10, [2086106]
[2025-04-19 04:00:30] 2025-04-18 19:00:19,891 | INFO     | zombie collector waiting for pid 2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:19,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 04:00:30] 2025-04-18 19:00:19,891 | INFO     | collected zombie processes
[2025-04-19 04:00:30] 2025-04-18 19:00:19,891 | INFO     | will attempt to kill all subprocesses of pid=2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:19,957 | INFO     | process IDs to be killed: [2086106] (in reverse order)
[2025-04-19 04:00:30] 2025-04-18 19:00:19,985 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 04:00:30] 2025-04-18 19:00:19,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 04:00:30] 2025-04-18 19:00:19,988 | INFO     | did not find any defunct processes belonging to 2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:19,990 | INFO     | did not find any defunct processes belonging to 2086106
[2025-04-19 04:00:30] 2025-04-18 19:00:19,991 | INFO     | ready for new job
[2025-04-19 04:00:30] 2025-04-18 19:00:19,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 04:00:30] 2025-04-18 19:00:19,992 | INFO     | **************************************
[2025-04-19 04:00:30] 2025-04-18 19:00:19,992 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 04:00:30] 2025-04-18 19:00:19,992 | INFO     | **************************************
[2025-04-19 04:00:30] 2025-04-18 19:00:19,992 | INFO     | 
[2025-04-19 04:00:30] 2025-04-18 19:00:19,993 | INFO     | architecture information:
[2025-04-19 04:00:30] 2025-04-18 19:00:19,993 | INFO     | executing command: cat /etc/os-release
[2025-04-19 04:00:30] 2025-04-18 19:00:20,002 | INFO     | cat /etc/os-release:
[2025-04-19 04:00:30] NAME="CentOS Linux"
[2025-04-19 04:00:30] VERSION="7 (Core)"
[2025-04-19 04:00:30] ID="centos"
[2025-04-19 04:00:30] ID_LIKE="rhel fedora"
[2025-04-19 04:00:30] VERSION_ID="7"
[2025-04-19 04:00:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 04:00:30] ANSI_COLOR="0;31"
[2025-04-19 04:00:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 04:00:30] HOME_URL="https://www.centos.org/"
[2025-04-19 04:00:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 04:00:30] 
[2025-04-19 04:00:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 04:00:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 04:00:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 04:00:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 04:00:30] 
[2025-04-19 04:00:30] 2025-04-18 19:00:20,002 | INFO     | **************************************
[2025-04-19 04:00:30] 2025-04-18 19:00:20,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 04:00:30] 2025-04-18 19:00:20,513 | INFO     | sufficient remaining disk space (84745912320 B)
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | INFO     | update_server=False
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:00:30] 2025-04-18 19:00:20,514 | INFO     | aborting loop
[2025-04-19 04:00:30] 2025-04-18 19:00:20,553 | INFO     | all job control threads have been joined
[2025-04-19 04:00:30] 2025-04-18 19:00:20,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 04:00:30] 2025-04-18 19:00:20,787 | INFO     | all data control threads have been joined
[2025-04-19 04:00:30] 2025-04-18 19:00:21,319 | INFO     | all payload control threads have been joined
[2025-04-19 04:00:30] 2025-04-18 19:00:21,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 04:00:30] 2025-04-18 19:00:21,515 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 04:00:30] 2025-04-18 19:00:21,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 04:00:30] 2025-04-18 19:00:21,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 04:00:30] 2025-04-18 19:00:21,519 | INFO     | [job] job monitor thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,519 | INFO     | [job] retrieve thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,519 | INFO     | [job] queue monitor thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,558 | INFO     | [job] control thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,586 | INFO     | [payload] failed_post thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,636 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,662 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:21,792 | INFO     | [data] control thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,107 | INFO     | [payload] validate_post thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,324 | INFO     | [payload] control thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,508 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,590 | INFO     | [data] copytool_in thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:22,938 | INFO     | [job] validate thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:23,410 | INFO     | [data] copytool_out thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:24,623 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 04:00:30] 2025-04-18 19:00:25,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805117155136)>', '<ExcThread(monitor, started 139804406707968)>']
[2025-04-19 04:00:30] 2025-04-18 19:00:25,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 04:00:30] 2025-04-18 19:00:25,535 | INFO     | [monitor] control thread has ended
[2025-04-19 04:00:30] 2025-04-18 19:00:30,404 | INFO     | all workflow threads have been joined
[2025-04-19 04:00:30] 2025-04-18 19:00:30,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 04:00:30] 2025-04-18 19:00:30,404 | INFO     | traces error code: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:30,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 04:00:30] 2025-04-18 19:00:30,473 [wrapper] ==== pilot stdout END ====
[2025-04-19 04:00:30] 2025-04-18 19:00:30,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 04:00:30] 2025-04-18 19:00:30,476 [wrapper] pilotpid: 2079546
[2025-04-19 04:00:30] 2025-04-18 19:00:30,478 [wrapper] Pilot exit status: 0
[2025-04-19 04:00:30] 2025-04-18 19:00:30,483 [wrapper] pandaids: 6603699383
[2025-04-19 04:00:30] 2025-04-18 19:00:30,502 [wrapper] cleanup supervisor_pilot 2124172 2079547
[2025-04-19 04:00:30] 2025-04-18 19:00:30,503 [wrapper] Test setup, not cleaning
[2025-04-19 04:00:30] 2025-04-18 19:00:30,505 [wrapper] apfmon messages muted
[2025-04-19 04:00:30] 2025-04-18 19:00:30,506 [wrapper] ==== wrapper stdout END ====
[2025-04-19 04:00:30] 2025-04-18 19:00:30,508 [wrapper] ==== wrapper stderr END ====
[2025-04-19 04:00:30]  *** Error codes and diagnostics ***
[2025-04-19 04:00:30]     "exeErrorCode": 0,
[2025-04-19 04:00:30]     "exeErrorDiag": "",
[2025-04-19 04:00:30]     "pilotErrorCode": 0,
[2025-04-19 04:00:30]     "pilotErrorDiag": "",
[2025-04-19 04:00:30]  *** Listing of results directory ***
[2025-04-19 04:00:30] total 418012
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc      5111 Apr 16 11:44 queuedata.json
[2025-04-19 04:00:30] -rwx------. 1 boinc boinc     37140 Apr 16 11:47 runpilot2-wrapper.sh
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc    495897 Apr 16 11:47 pilot3.tar.gz
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc       100 Apr 19 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 04:00:30] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 02:21 run_atlas
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc       105 Apr 19 02:21 job.xml
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc     17569 Apr 19 02:21 start_atlas.sh
[2025-04-19 04:00:30] drwxrwx--x. 2 boinc boinc        68 Apr 19 02:21 shared
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc    508884 Apr 19 02:21 input.tar.gz
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc      9465 Apr 19 02:21 init_data.xml
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc 225954910 Apr 19 02:21 EVNT.44075481._001376.pool.root.1
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc         0 Apr 19 02:21 boinc_lockfile
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc      2576 Apr 19 02:21 pandaJob.out
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc       424 Apr 19 02:21 setup.sh.local
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc    991292 Apr 19 02:21 agis_schedconf.cvmfs.json
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc   1618536 Apr 19 02:21 agis_ddmendpoints.agis.ALL.json
[2025-04-19 04:00:30] drwx------. 4 boinc boinc      4096 Apr 19 02:21 pilot3
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc 196562841 Apr 19 03:59 HITS.44075483._035043.pool.root.1
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc       529 Apr 19 03:59 boinc_task_state.xml
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc      1020 Apr 19 04:00 memory_monitor_summary.json
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc        95 Apr 19 04:00 pilot_heartbeat.json
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc    267437 Apr 19 04:00 log.44075483._035043.job.log.tgz.1
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc      7675 Apr 19 04:00 heartbeat.json
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc      8192 Apr 19 04:00 boinc_mmap_file
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc        27 Apr 19 04:00 wrapper_checkpoint.txt
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc      4353 Apr 19 04:00 pilotlog.txt
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc    568471 Apr 19 04:00 log.44075483._035043.job.log.1
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc       357 Apr 19 04:00 output.list
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc       620 Apr 19 04:00 runtime_log
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc    849920 Apr 19 04:00 result.tar.gz
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc     10971 Apr 19 04:00 runtime_log.err
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc       642 Apr 19 04:00 R50NDmSz7O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLOZLDmAGXpIm.diag
[2025-04-19 04:00:30] -rw-r--r--. 1 boinc boinc     20720 Apr 19 04:00 stderr.txt
[2025-04-19 04:00:30] HITS file was successfully produced:
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc 196562841 Apr 19 03:59 shared/HITS.pool.root.1
[2025-04-19 04:00:30]  *** Contents of shared directory: ***
[2025-04-19 04:00:30] total 413972
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc     17569 Apr 19 02:21 start_atlas.sh
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc    508884 Apr 19 02:21 input.tar.gz
[2025-04-19 04:00:30] -rw-r--r--. 2 boinc boinc 225954910 Apr 19 02:21 ATLAS.root_0
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc 196562841 Apr 19 03:59 HITS.pool.root.1
[2025-04-19 04:00:30] -rw-------. 1 boinc boinc    849920 Apr 19 04:00 result.tar.gz
04:00:32 (2075818): run_atlas exited; CPU time 29654.129730
04:00:32 (2075818): called boinc_finish(0)

</stderr_txt>
]]>

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