Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:18 (14378): wrapper (7.7.26015): starting
10:04:18 (14378): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 10:04:18] Arguments: --nthreads 12
[2025-04-18 10:04:18] Threads: 12
[2025-04-18 10:04:18] Checking for CVMFS
[2025-04-18 10:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 10:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 10:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 10:04:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 10:04:19] 2.11.2.0 10568 275941 163756 145003 0 56 18628707 20275201 1 130560 0 22798172 99.990 6994260 51118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 10:04:19] CVMFS is ok
[2025-04-18 10:04:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 10:04:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 10:04:19] Further information can be found at the LHC@home message board.
[2025-04-18 10:04:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 10:04:19] Checking for apptainer binary...
[2025-04-18 10:04:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 10:04:19] Running /usr/bin/apptainer --version
[2025-04-18 10:04:19] apptainer version 1.3.2-1.el7
[2025-04-18 10:04:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 10:04:20] c-205-24.aglt2.org
[2025-04-18 10:04:20] apptainer works
[2025-04-18 10:04:20] Set ATHENA_PROC_NUMBER=12
[2025-04-18 10:04:20] Set ATHENA_CORE_NUMBER=12
[2025-04-18 10:04:20] Starting ATLAS job with PandaID=6604148268
[2025-04-18 10:04:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 11:27:37]  *** The last 200 lines of the pilot log: ***
[2025-04-18 11:27:37]  status=None
[2025-04-18 11:27:37]  status_code=0
[2025-04-18 11:27:37]  storage_token=
[2025-04-18 11:27:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6604148268/log.44075483._042745.job.log.tgz.1
[2025-04-18 11:27:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/b4/log.44075483._042745.job.log.tgz.1
[2025-04-18 11:27:37]  workdir=None
[2025-04-18 11:27:37] ]
[2025-04-18 11:27:37] 2025-04-18 15:27:07,393 | INFO     | transferring file log.44075483._042745.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6604148268/log.44075483._042745.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 11:27:37] 2025-04-18 15:27:07,393 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6604148268/log.44075483._042745.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._042745.job
[2025-04-18 11:27:37] 2025-04-18 15:27:07,415 | INFO     | adding to output.list: log.44075483._042745.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/b4/log.44075483._042745.job.log.tg
[2025-04-18 11:27:37] 2025-04-18 15:27:07,416 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 11:27:37] 2025-04-18 15:27:07,416 | INFO     | summary of transferred files:
[2025-04-18 11:27:37] 2025-04-18 15:27:07,416 | INFO     |  -- lfn=log.44075483._042745.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 11:27:37] 2025-04-18 15:27:07,416 | INFO     | stage-out finished correctly
[2025-04-18 11:27:37] 2025-04-18 15:27:07,595 | WARNING  | process 25306 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 11:27:37] 2025-04-18 15:27:07,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604148268/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 11:27:37] 2025-04-18 15:27:07,684 | INFO     | number of running child processes to parent process 25306: 1
[2025-04-18 11:27:37] 2025-04-18 15:27:07,684 | INFO     | maximum number of monitored processes: 6
[2025-04-18 11:27:37] 2025-04-18 15:27:10,187 | INFO     | monitor loop #371: job 0:6604148268 is in state 'finished'
[2025-04-18 11:27:37] 2025-04-18 15:27:10,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:27:37] 2025-04-18 15:27:10,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 11:27:37] 2025-04-18 15:27:12,291 | INFO     | job 6604148268 has state=finished
[2025-04-18 11:27:37] 2025-04-18 15:27:12,291 | INFO     | preparing for final server update for job 6604148268 in state='finished'
[2025-04-18 11:27:37] 2025-04-18 15:27:12,300 | INFO     | this job has now completed (state=finished)
[2025-04-18 11:27:37] 2025-04-18 15:27:12,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 11:27:37] 2025-04-18 15:27:12,300 | INFO     | log transfer has been attempted: DONE
[2025-04-18 11:27:37] 2025-04-18 15:27:12,300 | INFO     | job 6604148268 has finished - writing final server update
[2025-04-18 11:27:37] 2025-04-18 15:27:12,301 | INFO     | total number of processed events: 400 (read)
[2025-04-18 11:27:37] 2025-04-18 15:27:12,302 | INFO     | executing command: lscpu
[2025-04-18 11:27:37] 2025-04-18 15:27:12,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 11:27:37] 2025-04-18 15:27:12,691 | INFO     | monitor loop #372: job 0:6604148268 is in state 'finished'
[2025-04-18 11:27:37] 2025-04-18 15:27:12,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:27:37] 2025-04-18 15:27:15,194 | INFO     | monitor loop #373: job 0:6604148268 is in state 'finished'
[2025-04-18 11:27:37] 2025-04-18 15:27:15,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:27:37] 2025-04-18 15:27:17,697 | INFO     | monitor loop #374: job 0:6604148268 is in state 'finished'
[2025-04-18 11:27:37] 2025-04-18 15:27:17,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,272 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 11:27:37] 2025-04-18 15:27:18,273 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604148268/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,274 | INFO     | extracted standard info from prmon json
[2025-04-18 11:27:37] 2025-04-18 15:27:18,274 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 11:27:37] 2025-04-18 15:27:18,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 11:27:37] 2025-04-18 15:27:18,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 11:27:37] 2025-04-18 15:27:18,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 11:27:37] 2025-04-18 15:27:18,277 | INFO     | fitting pss+swap vs Time
[2025-04-18 11:27:37] 2025-04-18 15:27:18,278 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 11:27:37] 2025-04-18 15:27:18,278 | INFO     | sum of deviations: 26324807298.0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,278 | INFO     | mean x: 1744987633.5
[2025-04-18 11:27:37] 2025-04-18 15:27:18,279 | INFO     | mean y: 2563090.027027027
[2025-04-18 11:27:37] 2025-04-18 15:27:18,279 | INFO     | -- intersect: -365645508283.5447
[2025-04-18 11:27:37] 2025-04-18 15:27:18,279 | INFO     | intersect: -365645508283.5447
[2025-04-18 11:27:37] 2025-04-18 15:27:18,279 | INFO     | chi2: 1.884933289540336
[2025-04-18 11:27:37] 2025-04-18 15:27:18,280 | INFO     | -- intersect: -365645508283.5447
[2025-04-18 11:27:37] 2025-04-18 15:27:18,280 | INFO     | current memory leak: 209.54 B/s (using 74 data points, chi2=1.88)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,280 | INFO     | ..............................
[2025-04-18 11:27:37] 2025-04-18 15:27:18,280 | INFO     | . Timing measurements:
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . get job = 0 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . initial setup = 2 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . payload setup = 7 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . stage-in = 0 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . payload execution = 4925 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . stage-out = 0 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | . log creation = 0 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,281 | INFO     | ..............................
[2025-04-18 11:27:37] 2025-04-18 15:27:18,365 | INFO     | 
[2025-04-18 11:27:37] 2025-04-18 15:27:18,365 | INFO     | job summary report
[2025-04-18 11:27:37] 2025-04-18 15:27:18,365 | INFO     | --------------------------------------------------
[2025-04-18 11:27:37] 2025-04-18 15:27:18,365 | INFO     | PanDA job id: 6604148268
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | task id: 44075483
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | errors: (none)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | pilot state: finished 
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | transexitcode: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,366 | INFO     | exeerrorcode: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | exeerrordiag: 
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | exitcode: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | exitmsg: OK
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | cpuconsumptiontime: 45841 s
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | nevents: 400
[2025-04-18 11:27:37] 2025-04-18 15:27:18,367 | INFO     | neventsw: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | pid: 25306
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | pgrp: 25306
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | corecount: 12
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | event service: False
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | sizes: {0: 2425995, 1: 2426851, 6: 2427057, 12: 2427085, 4936: 2453214, 4939: 2462155, 4942: 2462339, 4949: 2462509}
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | --------------------------------------------------
[2025-04-18 11:27:37] 2025-04-18 15:27:18,368 | INFO     | 
[2025-04-18 11:27:37] 2025-04-18 15:27:18,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 11:27:37] 2025-04-18 15:27:18,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,392 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 11:27:37] 2025-04-18 15:27:18,395 | INFO     | job 6604148268 has completed (purged errors)
[2025-04-18 11:27:37] 2025-04-18 15:27:18,396 | INFO     | overall cleanup function is called
[2025-04-18 11:27:37] 2025-04-18 15:27:19,404 | INFO     | --- collectZombieJob: --- 10, [25306]
[2025-04-18 11:27:37] 2025-04-18 15:27:19,404 | INFO     | zombie collector waiting for pid 25306
[2025-04-18 11:27:37] 2025-04-18 15:27:19,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 11:27:37] 2025-04-18 15:27:19,404 | INFO     | collected zombie processes
[2025-04-18 11:27:37] 2025-04-18 15:27:19,405 | INFO     | will attempt to kill all subprocesses of pid=25306
[2025-04-18 11:27:37] 2025-04-18 15:27:19,497 | INFO     | process IDs to be killed: [25306] (in reverse order)
[2025-04-18 11:27:37] 2025-04-18 15:27:19,549 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 11:27:37] 2025-04-18 15:27:19,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 11:27:37] 2025-04-18 15:27:19,552 | INFO     | did not find any defunct processes belonging to 25306
[2025-04-18 11:27:37] 2025-04-18 15:27:19,554 | INFO     | did not find any defunct processes belonging to 25306
[2025-04-18 11:27:37] 2025-04-18 15:27:19,554 | INFO     | ready for new job
[2025-04-18 11:27:37] 2025-04-18 15:27:19,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 11:27:37] 2025-04-18 15:27:19,555 | INFO     | **************************************
[2025-04-18 11:27:37] 2025-04-18 15:27:19,555 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 11:27:37] 2025-04-18 15:27:19,555 | INFO     | **************************************
[2025-04-18 11:27:37] 2025-04-18 15:27:19,555 | INFO     | 
[2025-04-18 11:27:37] 2025-04-18 15:27:19,556 | INFO     | architecture information:
[2025-04-18 11:27:37] 2025-04-18 15:27:19,556 | INFO     | executing command: cat /etc/os-release
[2025-04-18 11:27:37] 2025-04-18 15:27:19,570 | INFO     | cat /etc/os-release:
[2025-04-18 11:27:37] NAME="CentOS Linux"
[2025-04-18 11:27:37] VERSION="7 (Core)"
[2025-04-18 11:27:37] ID="centos"
[2025-04-18 11:27:37] ID_LIKE="rhel fedora"
[2025-04-18 11:27:37] VERSION_ID="7"
[2025-04-18 11:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 11:27:37] ANSI_COLOR="0;31"
[2025-04-18 11:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 11:27:37] HOME_URL="https://www.centos.org/"
[2025-04-18 11:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 11:27:37] 
[2025-04-18 11:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 11:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 11:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 11:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 11:27:37] 
[2025-04-18 11:27:37] 2025-04-18 15:27:19,570 | INFO     | **************************************
[2025-04-18 11:27:37] 2025-04-18 15:27:19,994 | INFO     | PID=17992 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 11:27:37] 2025-04-18 15:27:20,073 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 11:27:37] 2025-04-18 15:27:20,090 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-04-18 11:27:37] 2025-04-18 15:27:20,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 11:27:37] 2025-04-18 15:27:20,090 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 11:27:37] 2025-04-18 15:27:20,091 | INFO     | update_server=False
[2025-04-18 11:27:37] 2025-04-18 15:27:20,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 11:27:37] 2025-04-18 15:27:20,091 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 11:27:37] 2025-04-18 15:27:20,091 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 11:27:37] 2025-04-18 15:27:20,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 11:27:37] 2025-04-18 15:27:20,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 11:27:37] 2025-04-18 15:27:20,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:27:37] 2025-04-18 15:27:20,201 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 11:27:37] 2025-04-18 15:27:20,201 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 11:27:37] 2025-04-18 15:27:20,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:27:37] 2025-04-18 15:27:20,201 | INFO     | will abort loop
[2025-04-18 11:27:37] 2025-04-18 15:27:20,400 | INFO     | all data control threads have been joined
[2025-04-18 11:27:37] 2025-04-18 15:27:20,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 11:27:37] 2025-04-18 15:27:20,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 11:27:37] 2025-04-18 15:27:21,096 | INFO     | [job] retrieve thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,098 | INFO     | [job] queue monitor thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,207 | INFO     | [job] job monitor thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,348 | INFO     | all job control threads have been joined
[2025-04-18 11:27:37] 2025-04-18 15:27:21,353 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,405 | INFO     | [data] control thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,446 | INFO     | all payload control threads have been joined
[2025-04-18 11:27:37] 2025-04-18 15:27:21,566 | INFO     | [job] validate thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:21,724 | INFO     | [payload] failed_post thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,108 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,354 | INFO     | [job] control thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,376 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,447 | INFO     | [payload] control thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,466 | INFO     | [payload] validate_post thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,501 | INFO     | [data] copytool_in thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:22,523 | INFO     | [data] copytool_out thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:24,943 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:30,712 | INFO     | job.realtimelogging is not enabled
[2025-04-18 11:27:37] 2025-04-18 15:27:31,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 11:27:37] 2025-04-18 15:27:32,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347054114624)>', '<ExcThread(monitor, started 140346033956608)>']
[2025-04-18 11:27:37] 2025-04-18 15:27:33,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 11:27:37] 2025-04-18 15:27:33,153 | INFO     | [monitor] control thread has ended
[2025-04-18 11:27:37] 2025-04-18 15:27:37,586 | INFO     | all workflow threads have been joined
[2025-04-18 11:27:37] 2025-04-18 15:27:37,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 11:27:37] 2025-04-18 15:27:37,586 | INFO     | traces error code: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:37,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 11:27:37] 2025-04-18 15:27:37,679 [wrapper] ==== pilot stdout END ====
[2025-04-18 11:27:37] 2025-04-18 15:27:37,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 11:27:37] 2025-04-18 15:27:37,687 [wrapper] pilotpid: 17992
[2025-04-18 11:27:37] 2025-04-18 15:27:37,691 [wrapper] Pilot exit status: 0
[2025-04-18 11:27:37] 2025-04-18 15:27:37,708 [wrapper] pandaids: 6604148268
[2025-04-18 11:27:37] 2025-04-18 15:27:37,747 [wrapper] cleanup supervisor_pilot 20624 17993
[2025-04-18 11:27:37] 2025-04-18 15:27:37,751 [wrapper] Test setup, not cleaning
[2025-04-18 11:27:37] 2025-04-18 15:27:37,755 [wrapper] apfmon messages muted
[2025-04-18 11:27:37] 2025-04-18 15:27:37,759 [wrapper] ==== wrapper stdout END ====
[2025-04-18 11:27:37] 2025-04-18 15:27:37,763 [wrapper] ==== wrapper stderr END ====
[2025-04-18 11:27:37]  *** Error codes and diagnostics ***
[2025-04-18 11:27:37]     "exeErrorCode": 0,
[2025-04-18 11:27:37]     "exeErrorDiag": "",
[2025-04-18 11:27:37]     "pilotErrorCode": 0,
[2025-04-18 11:27:37]     "pilotErrorDiag": "",
[2025-04-18 11:27:37]  *** Listing of results directory ***
[2025-04-18 11:27:37] total 411492
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 12:16 pilot3.tar.gz
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 12:37 queuedata.json
[2025-04-18 11:27:37] -rwx------ 1 boincer umatlas     37140 Apr 16 12:39 runpilot2-wrapper.sh
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas       100 Apr 18 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 11:27:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 10:04 run_atlas
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas       105 Apr 18 10:04 job.xml
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas 223015505 Apr 18 10:04 EVNT.44075481._001674.pool.root.1
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 10:04 start_atlas.sh
[2025-04-18 11:27:37] drwxrwx--x 2 boincer umatlas      4096 Apr 18 10:04 shared
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 10:04 input.tar.gz
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas         0 Apr 18 10:04 boinc_lockfile
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 10:04 pandaJob.out
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas       424 Apr 18 10:04 setup.sh.local
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas    990604 Apr 18 10:04 agis_schedconf.cvmfs.json
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas   1618536 Apr 18 10:04 agis_ddmendpoints.agis.ALL.json
[2025-04-18 11:27:37] drwx------ 4 boincer umatlas      4096 Apr 18 10:04 pilot3
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 11:18 init_data.xml
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas        95 Apr 18 11:26 pilot_heartbeat.json
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas 192826203 Apr 18 11:26 HITS.44075483._042745.pool.root.1
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas       529 Apr 18 11:26 boinc_task_state.xml
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas      1053 Apr 18 11:27 memory_monitor_summary.json
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas    356489 Apr 18 11:27 log.44075483._042745.job.log.tgz.1
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas      7755 Apr 18 11:27 heartbeat.json
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 11:27 boinc_mmap_file
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas        27 Apr 18 11:27 wrapper_checkpoint.txt
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas      5051 Apr 18 11:27 pilotlog.txt
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas    472767 Apr 18 11:27 log.44075483._042745.job.log.1
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas       357 Apr 18 11:27 output.list
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas       620 Apr 18 11:27 runtime_log
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas    849920 Apr 18 11:27 result.tar.gz
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 11:27 runtime_log.err
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas       659 Apr 18 11:27 p7QNDmQyKP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmwgaLDm4RxO5n.diag
[2025-04-18 11:27:37] -rw-r--r-- 1 boincer umatlas     22054 Apr 18 11:27 stderr.txt
[2025-04-18 11:27:37] HITS file was successfully produced:
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas 192826203 Apr 18 11:26 shared/HITS.pool.root.1
[2025-04-18 11:27:37]  *** Contents of shared directory: ***
[2025-04-18 11:27:37] total 407456
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas 223015505 Apr 18 10:04 ATLAS.root_0
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 10:04 start_atlas.sh
[2025-04-18 11:27:37] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 10:04 input.tar.gz
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas 192826203 Apr 18 11:26 HITS.pool.root.1
[2025-04-18 11:27:37] -rw------- 1 boincer umatlas    849920 Apr 18 11:27 result.tar.gz
11:27:39 (14378): run_atlas exited; CPU time 45765.833570
11:27:39 (14378): called boinc_finish(0)

</stderr_txt>
]]>

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