Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:37:16 (4074948): wrapper (7.7.26015): starting
10:37:16 (4074948): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 10:37:16] Arguments: --nthreads 8
[2025-04-18 10:37:16] Threads: 8
[2025-04-18 10:37:16] Checking for CVMFS
[2025-04-18 10:37:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 10:37:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 10:37:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 10:37:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 10:37:20] 2.12.6.0 425763 44516 165412 145005 2 321 28451784 32935936 23321 130560 0 54134851 99.635 53224859 9410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 10:37:20] CVMFS is ok
[2025-04-18 10:37:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 10:37:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 10:37:20] Further information can be found at the LHC@home message board.
[2025-04-18 10:37:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 10:37:20] Checking for apptainer binary...
[2025-04-18 10:37:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 10:37:20] Running /usr/bin/apptainer --version
[2025-04-18 10:37:20] apptainer version 1.4.0-1.el9
[2025-04-18 10:37:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 10:37:22] c6-12-25-1.aglt2.org
[2025-04-18 10:37:22] apptainer works
[2025-04-18 10:37:22] Set ATHENA_PROC_NUMBER=8
[2025-04-18 10:37:22] Set ATHENA_CORE_NUMBER=8
[2025-04-18 10:37:22] Starting ATLAS job with PandaID=6606171454
[2025-04-18 10:37:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 20:12:02]  *** The last 200 lines of the pilot log: ***
[2025-04-18 20:12:02] 2025-04-19 00:11:40,911 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6606171454/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 20:12:02] 2025-04-19 00:11:40,917 | INFO     | extracted standard info from prmon json
[2025-04-18 20:12:02] 2025-04-19 00:11:40,917 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 20:12:02] 2025-04-19 00:11:40,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 20:12:02] 2025-04-19 00:11:40,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 20:12:02] 2025-04-19 00:11:40,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 20:12:02] 2025-04-19 00:11:40,946 | INFO     | fitting pss+swap vs Time
[2025-04-18 20:12:02] 2025-04-19 00:11:40,948 | INFO     | sum of square deviations: 54456345452.85543
[2025-04-18 20:12:02] 2025-04-19 00:11:40,980 | INFO     | sum of deviations: 406409606817.4517
[2025-04-18 20:12:02] 2025-04-19 00:11:40,980 | INFO     | mean x: 1745004382.7839286
[2025-04-18 20:12:02] 2025-04-19 00:11:40,981 | INFO     | mean y: 2382777.094642857
[2025-04-18 20:12:02] 2025-04-19 00:11:40,981 | INFO     | -- intersect: -13020645837.925282
[2025-04-18 20:12:02] 2025-04-19 00:11:40,981 | INFO     | intersect: -13020645837.925282
[2025-04-18 20:12:02] 2025-04-19 00:11:40,983 | INFO     | chi2: 8.876906206390926
[2025-04-18 20:12:02] 2025-04-19 00:11:41,003 | INFO     | sum of square deviations: 53010919029.53887
[2025-04-18 20:12:02] 2025-04-19 00:11:41,103 | INFO     | sum of deviations: 509142961225.259
[2025-04-18 20:12:02] 2025-04-19 00:11:41,104 | INFO     | mean x: 1745004230.2954955
[2025-04-18 20:12:02] 2025-04-19 00:11:41,104 | INFO     | mean y: 2393575.583783784
[2025-04-18 20:12:02] 2025-04-19 00:11:41,104 | INFO     | -- intersect: -16757486038.429026
[2025-04-18 20:12:02] 2025-04-19 00:11:41,104 | INFO     | intersect: -16757486038.429026
[2025-04-18 20:12:02] 2025-04-19 00:11:41,129 | INFO     | chi2: 6.704930239108354
[2025-04-18 20:12:02] 2025-04-19 00:11:41,129 | INFO     | current chi2=6.704930239108354 (change=24.467713376523665 %)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,129 | INFO     | right removable region: 554
[2025-04-18 20:12:02] 2025-04-19 00:11:41,165 | INFO     | sum of square deviations: 53010514479.12798
[2025-04-18 20:12:02] 2025-04-19 00:11:41,203 | INFO     | sum of deviations: 246671516737.47397
[2025-04-18 20:12:02] 2025-04-19 00:11:41,204 | INFO     | mean x: 1745004535.2936938
[2025-04-18 20:12:02] 2025-04-19 00:11:41,204 | INFO     | mean y: 2399613.763963964
[2025-04-18 20:12:02] 2025-04-19 00:11:41,204 | INFO     | -- intersect: -8117553940.056877
[2025-04-18 20:12:02] 2025-04-19 00:11:41,209 | INFO     | intersect: -8117553940.056877
[2025-04-18 20:12:02] 2025-04-19 00:11:41,211 | INFO     | chi2: 5.604880932046235
[2025-04-18 20:12:02] 2025-04-19 00:11:41,211 | INFO     | current chi2=5.604880932046235 (change=36.859973489288386 %)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,217 | INFO     | sum of square deviations: 51590565898.00004
[2025-04-18 20:12:02] 2025-04-19 00:11:41,255 | INFO     | sum of deviations: 137900699415.20004
[2025-04-18 20:12:02] 2025-04-19 00:11:41,255 | INFO     | mean x: 1745004687.8
[2025-04-18 20:12:02] 2025-04-19 00:11:41,255 | INFO     | mean y: 2411292.9927272727
[2025-04-18 20:12:02] 2025-04-19 00:11:41,256 | INFO     | -- intersect: -4661956363.027719
[2025-04-18 20:12:02] 2025-04-19 00:11:41,256 | INFO     | intersect: -4661956363.027719
[2025-04-18 20:12:02] 2025-04-19 00:11:41,262 | INFO     | chi2: 4.176774417322398
[2025-04-18 20:12:02] 2025-04-19 00:11:41,262 | INFO     | current chi2=4.176774417322398 (change=25.479694074472746 %)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,268 | INFO     | sum of square deviations: 50196266657.04581
[2025-04-18 20:12:02] 2025-04-19 00:11:41,302 | INFO     | sum of deviations: 49673366048.75253
[2025-04-18 20:12:02] 2025-04-19 00:11:41,303 | INFO     | mean x: 1745004840.3027523
[2025-04-18 20:12:02] 2025-04-19 00:11:41,303 | INFO     | mean y: 2420942.7651376147
[2025-04-18 20:12:02] 2025-04-19 00:11:41,307 | INFO     | -- intersect: -1724405970.1092021
[2025-04-18 20:12:02] 2025-04-19 00:11:41,308 | INFO     | intersect: -1724405970.1092021
[2025-04-18 20:12:02] 2025-04-19 00:11:41,310 | INFO     | chi2: 3.242638067277164
[2025-04-18 20:12:02] 2025-04-19 00:11:41,310 | INFO     | current chi2=3.242638067277164 (change=22.365017995012522 %)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,310 | INFO     | left removable region: 30
[2025-04-18 20:12:02] 2025-04-19 00:11:41,316 | INFO     | sum of square deviations: 44614497500.55534
[2025-04-18 20:12:02] 2025-04-19 00:11:41,347 | INFO     | sum of deviations: 27500890781.083977
[2025-04-18 20:12:02] 2025-04-19 00:11:41,348 | INFO     | mean x: 1745005114.8339694
[2025-04-18 20:12:02] 2025-04-19 00:11:41,348 | INFO     | mean y: 2446773.748091603
[2025-04-18 20:12:02] 2025-04-19 00:11:41,348 | INFO     | -- intersect: -1073194503.5045446
[2025-04-18 20:12:02] 2025-04-19 00:11:41,348 | INFO     | intersect: -1073194503.5045446
[2025-04-18 20:12:02] 2025-04-19 00:11:41,354 | INFO     | chi2: 0.09991737330132196
[2025-04-18 20:12:02] 2025-04-19 00:11:41,355 | INFO     | -- intersect: -1073194503.5045446
[2025-04-18 20:12:02] 2025-04-19 00:11:41,355 | INFO     | current memory leak: 0.62 B/s (using 524 data points, chi2=0.10)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,357 | INFO     | ..............................
[2025-04-18 20:12:02] 2025-04-19 00:11:41,362 | INFO     | . Timing measurements:
[2025-04-18 20:12:02] 2025-04-19 00:11:41,362 | INFO     | . get job = 1 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,362 | INFO     | . initial setup = 10 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,362 | INFO     | . payload setup = 56 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,362 | INFO     | . stage-in = 0 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,363 | INFO     | . payload execution = 34152 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,363 | INFO     | . stage-out = 8 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,363 | INFO     | . log creation = 2 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,363 | INFO     | ..............................
[2025-04-18 20:12:02] 2025-04-19 00:11:41,900 | INFO     | 
[2025-04-18 20:12:02] 2025-04-19 00:11:41,901 | INFO     | job summary report
[2025-04-18 20:12:02] 2025-04-19 00:11:41,901 | INFO     | --------------------------------------------------
[2025-04-18 20:12:02] 2025-04-19 00:11:41,901 | INFO     | PanDA job id: 6606171454
[2025-04-18 20:12:02] 2025-04-19 00:11:41,901 | INFO     | task id: 44075483
[2025-04-18 20:12:02] 2025-04-19 00:11:41,901 | INFO     | errors: (none)
[2025-04-18 20:12:02] 2025-04-19 00:11:41,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 20:12:02] 2025-04-19 00:11:41,902 | INFO     | pilot state: finished 
[2025-04-18 20:12:02] 2025-04-19 00:11:41,902 | INFO     | transexitcode: 0
[2025-04-18 20:12:02] 2025-04-19 00:11:41,902 | INFO     | exeerrorcode: 0
[2025-04-18 20:12:02] 2025-04-19 00:11:41,902 | INFO     | exeerrordiag: 
[2025-04-18 20:12:02] 2025-04-19 00:11:41,903 | INFO     | exitcode: 0
[2025-04-18 20:12:02] 2025-04-19 00:11:41,903 | INFO     | exitmsg: OK
[2025-04-18 20:12:02] 2025-04-19 00:11:41,903 | INFO     | cpuconsumptiontime: 114389 s
[2025-04-18 20:12:02] 2025-04-19 00:11:41,903 | INFO     | nevents: 400
[2025-04-18 20:12:02] 2025-04-19 00:11:41,908 | INFO     | neventsw: 0
[2025-04-18 20:12:02] 2025-04-19 00:11:41,908 | INFO     | pid: 4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:41,908 | INFO     | pgrp: 4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:41,908 | INFO     | corecount: 8
[2025-04-18 20:12:02] 2025-04-19 00:11:41,908 | INFO     | event service: False
[2025-04-18 20:12:02] 2025-04-19 00:11:41,909 | INFO     | sizes: {0: 2425996, 1: 2426597, 3: 2426681, 5: 2426709, 6: 2426709, 7: 2426936, 8: 2427092, 9: 2427120, 21: 2427148, 34: 2427176, 46: 2427204, 50: 2427718, 57: 242
[2025-04-18 20:12:02] 2025-04-19 00:11:41,909 | INFO     | --------------------------------------------------
[2025-04-18 20:12:02] 2025-04-19 00:11:41,909 | INFO     | 
[2025-04-18 20:12:02] 2025-04-19 00:11:41,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-18 20:12:02] 2025-04-19 00:11:42,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 20:12:02] 2025-04-19 00:11:42,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 20:12:02] 2025-04-19 00:11:42,017 | INFO     | job 6606171454 has completed (purged errors)
[2025-04-18 20:12:02] 2025-04-19 00:11:42,018 | INFO     | overall cleanup function is called
[2025-04-18 20:12:02] 2025-04-19 00:11:43,030 | INFO     | --- collectZombieJob: --- 10, [4094929]
[2025-04-18 20:12:02] 2025-04-19 00:11:43,031 | INFO     | zombie collector waiting for pid 4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:43,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 20:12:02] 2025-04-19 00:11:43,032 | INFO     | collected zombie processes
[2025-04-18 20:12:02] 2025-04-19 00:11:43,032 | INFO     | will attempt to kill all subprocesses of pid=4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:45,722 | INFO     | process IDs to be killed: [4094929] (in reverse order)
[2025-04-18 20:12:02] 2025-04-19 00:11:46,484 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 20:12:02] 2025-04-19 00:11:46,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 20:12:02] 2025-04-19 00:11:46,697 | INFO     | did not find any defunct processes belonging to 4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:46,948 | INFO     | did not find any defunct processes belonging to 4094929
[2025-04-18 20:12:02] 2025-04-19 00:11:46,949 | INFO     | ready for new job
[2025-04-18 20:12:02] 2025-04-19 00:11:46,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 20:12:02] 2025-04-19 00:11:46,969 | INFO     | **************************************
[2025-04-18 20:12:02] 2025-04-19 00:11:46,969 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 20:12:02] 2025-04-19 00:11:46,993 | INFO     | **************************************
[2025-04-18 20:12:02] 2025-04-19 00:11:46,993 | INFO     | 
[2025-04-18 20:12:02] 2025-04-19 00:11:47,099 | INFO     | architecture information:
[2025-04-18 20:12:02] 2025-04-19 00:11:47,100 | INFO     | executing command: cat /etc/os-release
[2025-04-18 20:12:02] 2025-04-19 00:11:47,282 | INFO     | cat /etc/os-release:
[2025-04-18 20:12:02] NAME="CentOS Linux"
[2025-04-18 20:12:02] VERSION="7 (Core)"
[2025-04-18 20:12:02] ID="centos"
[2025-04-18 20:12:02] ID_LIKE="rhel fedora"
[2025-04-18 20:12:02] VERSION_ID="7"
[2025-04-18 20:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 20:12:02] ANSI_COLOR="0;31"
[2025-04-18 20:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 20:12:02] HOME_URL="https://www.centos.org/"
[2025-04-18 20:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 20:12:02] 
[2025-04-18 20:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 20:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 20:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 20:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 20:12:02] 
[2025-04-18 20:12:02] 2025-04-19 00:11:47,284 | INFO     | **************************************
[2025-04-18 20:12:02] 2025-04-19 00:11:47,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-18 20:12:02] 2025-04-19 00:11:47,903 | INFO     | sufficient remaining disk space (73853304832 B)
[2025-04-18 20:12:02] 2025-04-19 00:11:47,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 20:12:02] 2025-04-19 00:11:47,904 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 20:12:02] 2025-04-19 00:11:47,904 | INFO     | update_server=False
[2025-04-18 20:12:02] 2025-04-19 00:11:47,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 20:12:02] 2025-04-19 00:11:47,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:12:02] 2025-04-19 00:11:47,913 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 20:12:02] 2025-04-19 00:11:47,913 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 20:12:02] 2025-04-19 00:11:47,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 20:12:02] 2025-04-19 00:11:47,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 20:12:02] 2025-04-19 00:11:47,940 | INFO     | all data control threads have been joined
[2025-04-18 20:12:02] 2025-04-19 00:11:48,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:12:02] 2025-04-19 00:11:48,234 | INFO     | aborting loop
[2025-04-18 20:12:02] 2025-04-19 00:11:48,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 20:12:02] 2025-04-19 00:11:48,911 | INFO     | [job] retrieve thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:48,912 | INFO     | [job] queue monitor thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:48,946 | INFO     | [data] control thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,068 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 20:12:02] 2025-04-19 00:11:49,101 | INFO     | all payload control threads have been joined
[2025-04-18 20:12:02] 2025-04-19 00:11:49,241 | INFO     | [job] job monitor thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,601 | INFO     | all job control threads have been joined
[2025-04-18 20:12:02] 2025-04-19 00:11:49,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,750 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,784 | INFO     | [payload] failed_post thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:49,881 | INFO     | [job] validate thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,108 | INFO     | [payload] control thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,114 | INFO     | [data] copytool_in thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,128 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,461 | INFO     | [payload] validate_post thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,608 | INFO     | [job] control thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:50,808 | INFO     | [data] copytool_out thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:53,114 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 20:12:02] 2025-04-19 00:11:55,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928066627392)>', '<ExcThread(monitor, started 139927710836480)>']
[2025-04-18 20:12:02] 2025-04-19 00:11:55,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 20:12:02] 2025-04-19 00:11:55,993 | INFO     | [monitor] control thread has ended
[2025-04-18 20:12:02] 2025-04-19 00:12:00,215 | INFO     | all workflow threads have been joined
[2025-04-18 20:12:02] 2025-04-19 00:12:00,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 20:12:02] 2025-04-19 00:12:00,216 | INFO     | traces error code: 0
[2025-04-18 20:12:02] 2025-04-19 00:12:00,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 20:12:02] 2025-04-19 00:12:00,983 [wrapper] ==== pilot stdout END ====
[2025-04-18 20:12:02] 2025-04-19 00:12:00,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 20:12:02] 2025-04-19 00:12:01,011 [wrapper] pilotpid: 4080705
[2025-04-18 20:12:02] 2025-04-19 00:12:01,026 [wrapper] Pilot exit status: 0
[2025-04-18 20:12:02] 2025-04-19 00:12:01,100 [wrapper] pandaids: 6606171454
[2025-04-18 20:12:02] 2025-04-19 00:12:01,334 [wrapper] cleanup supervisor_pilot 1867750 4080706
[2025-04-18 20:12:02] 2025-04-19 00:12:01,346 [wrapper] Test setup, not cleaning
[2025-04-18 20:12:02] 2025-04-19 00:12:01,369 [wrapper] apfmon messages muted
[2025-04-18 20:12:02] 2025-04-19 00:12:01,381 [wrapper] ==== wrapper stdout END ====
[2025-04-18 20:12:02] 2025-04-19 00:12:01,387 [wrapper] ==== wrapper stderr END ====
[2025-04-18 20:12:02]  *** Error codes and diagnostics ***
[2025-04-18 20:12:02]     "exeErrorCode": 0,
[2025-04-18 20:12:02]     "exeErrorDiag": "",
[2025-04-18 20:12:02]     "pilotErrorCode": 0,
[2025-04-18 20:12:02]     "pilotErrorDiag": "",
[2025-04-18 20:12:02]  *** Listing of results directory ***
[2025-04-18 20:12:02] total 423636
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 01:04 pilot3.tar.gz
[2025-04-18 20:12:02] -rwx------. 1 boincer umatlas     37140 Apr 18 01:06 runpilot2-wrapper.sh
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 01:06 queuedata.json
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas       100 Apr 18 10:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 20:12:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 10:37 run_atlas
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas       105 Apr 18 10:37 job.xml
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas 224397883 Apr 18 10:37 EVNT.44075481._002510.pool.root.1
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 10:37 start_atlas.sh
[2025-04-18 20:12:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 10:37 shared
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas    508889 Apr 18 10:37 input.tar.gz
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas         0 Apr 18 10:37 boinc_lockfile
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas      2579 Apr 18 10:37 pandaJob.out
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas       467 Apr 18 10:37 setup.sh.local
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas    990604 Apr 18 10:38 agis_schedconf.cvmfs.json
[2025-04-18 20:12:02] drwx------. 4 boincer umatlas      4096 Apr 18 10:38 pilot3
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas      6857 Apr 18 20:00 init_data.xml
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas 199883232 Apr 18 20:07 HITS.44075483._064598.pool.root.1
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas       532 Apr 18 20:08 boinc_task_state.xml
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas      1053 Apr 18 20:10 memory_monitor_summary.json
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas   1618536 Apr 18 20:10 agis_ddmendpoints.agis.ALL.json
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas    554787 Apr 18 20:10 log.44075483._064598.job.log.tgz.1
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas        95 Apr 18 20:11 pilot_heartbeat.json
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas      7751 Apr 18 20:11 heartbeat.json
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 20:11 boinc_mmap_file
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas      4476 Apr 18 20:12 pilotlog.txt
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas        29 Apr 18 20:12 wrapper_checkpoint.txt
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas   2274740 Apr 18 20:12 log.44075483._064598.job.log.1
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas       357 Apr 18 20:12 output.list
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas       620 Apr 18 20:12 runtime_log
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas   2846720 Apr 18 20:12 result.tar.gz
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas     11429 Apr 18 20:12 runtime_log.err
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas       667 Apr 18 20:12 mohMDmh6sP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmlTeLDm5l6cLm.diag
[2025-04-18 20:12:02] -rw-r--r--. 1 boincer umatlas     20989 Apr 18 20:12 stderr.txt
[2025-04-18 20:12:02] HITS file was successfully produced:
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas 199883232 Apr 18 20:07 shared/HITS.pool.root.1
[2025-04-18 20:12:02]  *** Contents of shared directory: ***
[2025-04-18 20:12:02] total 417648
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas 224397883 Apr 18 10:37 ATLAS.root_0
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 10:37 start_atlas.sh
[2025-04-18 20:12:02] -rw-r--r--. 2 boincer umatlas    508889 Apr 18 10:37 input.tar.gz
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas 199883232 Apr 18 20:07 HITS.pool.root.1
[2025-04-18 20:12:02] -rw-------. 1 boincer umatlas   2846720 Apr 18 20:12 result.tar.gz
20:12:03 (4074948): run_atlas exited; CPU time 117198.257430
20:12:03 (4074948): called boinc_finish(0)

</stderr_txt>
]]>

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