Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:13:58 (946292): wrapper (7.7.26015): starting
01:13:58 (946292): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 01:13:58] Arguments: --nthreads 3
[2025-04-19 01:13:58] Threads: 3
[2025-04-19 01:13:58] Checking for CVMFS
[2025-04-19 01:13:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:13:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:13:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:13:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:13:58] 2.9.2.0 2891 3347 81516 145019 4 1 17948988 36864001 0 130560 0 2464487 99.990 860811 12794 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 01:13:58] CVMFS is ok
[2025-04-19 01:13:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 01:13:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 01:13:58] Further information can be found at the LHC@home message board.
[2025-04-19 01:13:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:13:58] Checking for apptainer binary...
[2025-04-19 01:13:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:13:58] Running /usr/bin/apptainer --version
[2025-04-19 01:13:58] apptainer version 1.3.6-6.1
[2025-04-19 01:13:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:13:58] thA354b
[2025-04-19 01:13:58] apptainer works
[2025-04-19 01:13:59] Set ATHENA_PROC_NUMBER=3
[2025-04-19 01:13:59] Set ATHENA_CORE_NUMBER=3
[2025-04-19 01:13:59] Starting ATLAS job with PandaID=6604952874
[2025-04-19 01:13:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:41:04]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:41:04]  mtime=0
[2025-04-19 02:41:04]  protocol_id=None
[2025-04-19 02:41:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 02:41:04]  replicas=None
[2025-04-19 02:41:04]  scope=mc23_13p6TeV
[2025-04-19 02:41:04]  status=None
[2025-04-19 02:41:04]  status_code=0
[2025-04-19 02:41:04]  storage_token=
[2025-04-19 02:41:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6604952874/log.44075483._050352.job.log.tgz.1
[2025-04-19 02:41:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/f2/log.44075483._050352.job.log.tgz.1
[2025-04-19 02:41:04]  workdir=None
[2025-04-19 02:41:04] ]
[2025-04-19 02:41:04] 2025-04-19 00:40:38,822 | INFO     | transferring file log.44075483._050352.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6604952874/log.44075483._050352.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 02:41:04] 2025-04-19 00:40:38,822 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6604952874/log.44075483._050352.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0503
[2025-04-19 02:41:04] 2025-04-19 00:40:38,835 | INFO     | adding to output.list: log.44075483._050352.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/f2/log.44075483._050352.job.log.tg
[2025-04-19 02:41:04] 2025-04-19 00:40:38,836 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 02:41:04] 2025-04-19 00:40:38,836 | INFO     | summary of transferred files:
[2025-04-19 02:41:04] 2025-04-19 00:40:38,836 | INFO     |  -- lfn=log.44075483._050352.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 02:41:04] 2025-04-19 00:40:38,836 | INFO     | stage-out finished correctly
[2025-04-19 02:41:04] 2025-04-19 00:40:38,866 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 02:41:04] 2025-04-19 00:40:41,196 | INFO     | job 6604952874 has state=finished
[2025-04-19 02:41:04] 2025-04-19 00:40:41,196 | INFO     | preparing for final server update for job 6604952874 in state='finished'
[2025-04-19 02:41:04] 2025-04-19 00:40:41,197 | INFO     | this job has now completed (state=finished)
[2025-04-19 02:41:04] 2025-04-19 00:40:41,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 02:41:04] 2025-04-19 00:40:41,197 | INFO     | log transfer has been attempted: DONE
[2025-04-19 02:41:04] 2025-04-19 00:40:41,197 | INFO     | job 6604952874 has finished - writing final server update
[2025-04-19 02:41:04] 2025-04-19 00:40:41,197 | INFO     | total number of processed events: 400 (read)
[2025-04-19 02:41:04] 2025-04-19 00:40:41,198 | INFO     | executing command: lscpu
[2025-04-19 02:41:04] 2025-04-19 00:40:41,214 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 02:41:04] 2025-04-19 00:40:44,523 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 02:41:04] 2025-04-19 00:40:44,523 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6604952874/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,523 | INFO     | extracted standard info from prmon json
[2025-04-19 02:41:04] 2025-04-19 00:40:44,524 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 02:41:04] 2025-04-19 00:40:44,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 02:41:04] 2025-04-19 00:40:44,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 02:41:04] 2025-04-19 00:40:44,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | fitting pss+swap vs Time
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | sum of square deviations: 147126479.5
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | sum of deviations: 2475975268.5
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | mean x: 1745020716.5
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | mean y: 2512071.5512820515
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | -- intersect: -29364248770.939682
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | intersect: -29364248770.939682
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | chi2: 1.6592100710343778
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | -- intersect: -29364248770.939682
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | current memory leak: 16.83 B/s (using 78 data points, chi2=1.66)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | ..............................
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | . Timing measurements:
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | . get job = 0 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | . initial setup = 1 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,525 | INFO     | . payload setup = 2 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,526 | INFO     | . stage-in = 0 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,526 | INFO     | . payload execution = 5175 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,526 | INFO     | . stage-out = 0 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,526 | INFO     | . log creation = 0 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,526 | INFO     | ..............................
[2025-04-19 02:41:04] 2025-04-19 00:40:44,769 | INFO     | 
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | job summary report
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | --------------------------------------------------
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | PanDA job id: 6604952874
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | task id: 44075483
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | errors: (none)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | pilot state: finished 
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | transexitcode: 0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | exeerrorcode: 0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | exeerrordiag: 
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | exitcode: 0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | exitmsg: OK
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | cpuconsumptiontime: 13585 s
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | nevents: 400
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | neventsw: 0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | pid: 956381
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | pgrp: 956381
[2025-04-19 02:41:04] 2025-04-19 00:40:44,770 | INFO     | corecount: 3
[2025-04-19 02:41:04] 2025-04-19 00:40:44,771 | INFO     | event service: False
[2025-04-19 02:41:04] 2025-04-19 00:40:44,771 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5181: 2453558, 5182: 2462561, 5187: 2462675}
[2025-04-19 02:41:04] 2025-04-19 00:40:44,771 | INFO     | --------------------------------------------------
[2025-04-19 02:41:04] 2025-04-19 00:40:44,771 | INFO     | 
[2025-04-19 02:41:04] 2025-04-19 00:40:44,771 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | job 6604952874 has completed (purged errors)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,787 | INFO     | overall cleanup function is called
[2025-04-19 02:41:04] 2025-04-19 00:40:44,860 | WARNING  | process 956381 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 02:41:04] 2025-04-19 00:40:44,887 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,887 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,888 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6604952874/payload.stdout) since it has not been created yet
[2025-04-19 02:41:04] 2025-04-19 00:40:44,888 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 02:41:04] 2025-04-19 00:40:44,898 | INFO     | sufficient remaining disk space (342158737408 B)
[2025-04-19 02:41:04] 2025-04-19 00:40:44,898 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-19 02:41:04] 2025-04-19 00:40:44,898 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6604952874/HITS.44075483._050352.pool.root.1 since it does not exist
[2025-04-19 02:41:04] 2025-04-19 00:40:44,936 | INFO     | number of running child processes to parent process 956381: 1
[2025-04-19 02:41:04] 2025-04-19 00:40:44,936 | INFO     | maximum number of monitored processes: 6
[2025-04-19 02:41:04] 2025-04-19 00:40:44,936 | INFO     | aborting job monitoring since job object (job id=6604952874) has expired
[2025-04-19 02:41:04] 2025-04-19 00:40:45,794 | INFO     | --- collectZombieJob: --- 10, [956381]
[2025-04-19 02:41:04] 2025-04-19 00:40:45,794 | INFO     | zombie collector waiting for pid 956381
[2025-04-19 02:41:04] 2025-04-19 00:40:45,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:41:04] 2025-04-19 00:40:45,794 | INFO     | collected zombie processes
[2025-04-19 02:41:04] 2025-04-19 00:40:45,794 | INFO     | will attempt to kill all subprocesses of pid=956381
[2025-04-19 02:41:04] 2025-04-19 00:40:45,834 | INFO     | process IDs to be killed: [956381] (in reverse order)
[2025-04-19 02:41:04] 2025-04-19 00:40:45,857 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:41:04] 2025-04-19 00:40:45,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:41:04] 2025-04-19 00:40:45,859 | INFO     | did not find any defunct processes belonging to 956381
[2025-04-19 02:41:04] 2025-04-19 00:40:45,860 | INFO     | did not find any defunct processes belonging to 956381
[2025-04-19 02:41:04] 2025-04-19 00:40:45,860 | INFO     | ready for new job
[2025-04-19 02:41:04] 2025-04-19 00:40:45,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | **************************************
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | **************************************
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | 
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | architecture information:
[2025-04-19 02:41:04] 2025-04-19 00:40:45,861 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:41:04] 2025-04-19 00:40:45,870 | INFO     | cat /etc/os-release:
[2025-04-19 02:41:04] NAME="CentOS Linux"
[2025-04-19 02:41:04] VERSION="7 (Core)"
[2025-04-19 02:41:04] ID="centos"
[2025-04-19 02:41:04] ID_LIKE="rhel fedora"
[2025-04-19 02:41:04] VERSION_ID="7"
[2025-04-19 02:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:41:04] ANSI_COLOR="0;31"
[2025-04-19 02:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:41:04] HOME_URL="https://www.centos.org/"
[2025-04-19 02:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:41:04] 
[2025-04-19 02:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:41:04] 
[2025-04-19 02:41:04] 2025-04-19 00:40:45,870 | INFO     | **************************************
[2025-04-19 02:41:04] 2025-04-19 00:40:46,373 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 02:41:04] 2025-04-19 00:40:46,386 | INFO     | sufficient remaining disk space (342158737408 B)
[2025-04-19 02:41:04] 2025-04-19 00:40:46,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:41:04] 2025-04-19 00:40:46,386 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:41:04] 2025-04-19 00:40:46,386 | INFO     | update_server=False
[2025-04-19 02:41:04] 2025-04-19 00:40:46,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:41:04] 2025-04-19 00:40:46,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:41:04] 2025-04-19 00:40:46,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:41:04] 2025-04-19 00:40:46,387 | INFO     | aborting loop
[2025-04-19 02:41:04] 2025-04-19 00:40:46,595 | INFO     | all payload control threads have been joined
[2025-04-19 02:41:04] 2025-04-19 00:40:46,747 | INFO     | all job control threads have been joined
[2025-04-19 02:41:04] 2025-04-19 00:40:46,784 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:41:04] 2025-04-19 00:40:46,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:41:04] 2025-04-19 00:40:46,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:41:04] 2025-04-19 00:40:46,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:41:04] 2025-04-19 00:40:47,039 | INFO     | all data control threads have been joined
[2025-04-19 02:41:04] 2025-04-19 00:40:47,392 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,392 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,392 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,440 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,487 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,554 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,601 | INFO     | [payload] control thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:47,753 | INFO     | [job] control thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,040 | INFO     | [data] control thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,278 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,498 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,527 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,847 | INFO     | [job] validate thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:48,887 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:49,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:41:04] 2025-04-19 00:40:53,411 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:56,618 | INFO     | job.realtimelogging is not enabled
[2025-04-19 02:41:04] 2025-04-19 00:40:57,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:41:04] 2025-04-19 00:40:59,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681836910400)>', '<ExcThread(monitor, started 140681485989632)>']
[2025-04-19 02:41:04] 2025-04-19 00:40:59,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:41:04] 2025-04-19 00:40:59,852 | INFO     | [monitor] control thread has ended
[2025-04-19 02:41:04] 2025-04-19 00:41:04,391 | INFO     | all workflow threads have been joined
[2025-04-19 02:41:04] 2025-04-19 00:41:04,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:41:04] 2025-04-19 00:41:04,392 | INFO     | traces error code: 0
[2025-04-19 02:41:04] 2025-04-19 00:41:04,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:41:04] 2025-04-19 00:41:04,444 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:41:04] 2025-04-19 00:41:04,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:41:04] 2025-04-19 00:41:04,449 [wrapper] pilotpid: 949937
[2025-04-19 02:41:04] 2025-04-19 00:41:04,451 [wrapper] Pilot exit status: 0
[2025-04-19 02:41:04] 2025-04-19 00:41:04,458 [wrapper] pandaids: 6604952874
[2025-04-19 02:41:04] 2025-04-19 00:41:04,474 [wrapper] cleanup supervisor_pilot  968271 949938
[2025-04-19 02:41:04] 2025-04-19 00:41:04,476 [wrapper] Test setup, not cleaning
[2025-04-19 02:41:04] 2025-04-19 00:41:04,478 [wrapper] apfmon messages muted
[2025-04-19 02:41:04] 2025-04-19 00:41:04,481 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:41:04] 2025-04-19 00:41:04,483 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:41:04]  *** Error codes and diagnostics ***
[2025-04-19 02:41:04]     "exeErrorCode": 0,
[2025-04-19 02:41:04]     "exeErrorDiag": "",
[2025-04-19 02:41:04]     "pilotErrorCode": 0,
[2025-04-19 02:41:04]     "pilotErrorDiag": "",
[2025-04-19 02:41:04]  *** Listing of results directory ***
[2025-04-19 02:41:04] total 414340
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc      5111 Apr 17 06:27 queuedata.json
[2025-04-19 02:41:04] -rwx------ 1 boinc boinc     37140 Apr 17 06:27 runpilot2-wrapper.sh
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc    495897 Apr 17 06:27 pilot3.tar.gz
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc       100 Apr 19 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:41:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 01:13 run_atlas
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc       105 Apr 19 01:13 job.xml
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc 223188372 Apr 19 01:13 EVNT.44075481._001965.pool.root.1
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc      6921 Apr 19 01:13 init_data.xml
[2025-04-19 02:41:04] drwxrwx--x 2 boinc boinc      4096 Apr 19 01:13 shared
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc    508888 Apr 19 01:13 input.tar.gz
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc     17569 Apr 19 01:13 start_atlas.sh
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc         0 Apr 19 01:13 boinc_lockfile
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc      2579 Apr 19 01:13 pandaJob.out
[2025-04-19 02:41:04] -rw------- 1 boinc boinc       424 Apr 19 01:13 setup.sh.local
[2025-04-19 02:41:04] -rw------- 1 boinc boinc    991300 Apr 19 01:14 agis_schedconf.cvmfs.json
[2025-04-19 02:41:04] -rw------- 1 boinc boinc   1618536 Apr 19 01:14 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:41:04] drwx------ 4 boinc boinc      4096 Apr 19 01:14 pilot3
[2025-04-19 02:41:04] -rw------- 1 boinc boinc 195746775 Apr 19 02:40 HITS.44075483._050352.pool.root.1
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc       530 Apr 19 02:40 boinc_task_state.xml
[2025-04-19 02:41:04] -rw------- 1 boinc boinc        95 Apr 19 02:40 pilot_heartbeat.json
[2025-04-19 02:41:04] -rw------- 1 boinc boinc      1021 Apr 19 02:40 memory_monitor_summary.json
[2025-04-19 02:41:04] -rw------- 1 boinc boinc    238310 Apr 19 02:40 log.44075483._050352.job.log.tgz.1
[2025-04-19 02:41:04] -rw------- 1 boinc boinc      7659 Apr 19 02:40 heartbeat.json
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc      8192 Apr 19 02:40 boinc_mmap_file
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc        27 Apr 19 02:40 wrapper_checkpoint.txt
[2025-04-19 02:41:04] -rw------- 1 boinc boinc      4429 Apr 19 02:41 pilotlog.txt
[2025-04-19 02:41:04] -rw------- 1 boinc boinc    502732 Apr 19 02:41 log.44075483._050352.job.log.1
[2025-04-19 02:41:04] -rw------- 1 boinc boinc       357 Apr 19 02:41 output.list
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc       620 Apr 19 02:41 runtime_log
[2025-04-19 02:41:04] -rw------- 1 boinc boinc    757760 Apr 19 02:41 result.tar.gz
[2025-04-19 02:41:04] -rw------- 1 boinc boinc       659 Apr 19 02:41 zJKMDma1VP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmm1bLDm3UxdRm.diag
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc     11104 Apr 19 02:41 runtime_log.err
[2025-04-19 02:41:04] -rw-r--r-- 1 boinc boinc     21717 Apr 19 02:41 stderr.txt
[2025-04-19 02:41:04] HITS file was successfully produced:
[2025-04-19 02:41:04] -rw------- 1 boinc boinc 195746775 Apr 19 02:40 shared/HITS.pool.root.1
[2025-04-19 02:41:04]  *** Contents of shared directory: ***
[2025-04-19 02:41:04] total 410388
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc 223188372 Apr 19 01:13 ATLAS.root_0
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc    508888 Apr 19 01:13 input.tar.gz
[2025-04-19 02:41:04] -rw-r--r-- 2 boinc boinc     17569 Apr 19 01:13 start_atlas.sh
[2025-04-19 02:41:04] -rw------- 1 boinc boinc 195746775 Apr 19 02:40 HITS.pool.root.1
[2025-04-19 02:41:04] -rw------- 1 boinc boinc    757760 Apr 19 02:41 result.tar.gz
02:41:06 (946292): run_atlas exited; CPU time 13603.092159
02:41:06 (946292): called boinc_finish(0)

</stderr_txt>
]]>

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