Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:34 (2022081): wrapper (7.7.26015): starting
09:53:34 (2022081): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 09:53:34] Arguments: --nthreads 10
[2025-04-18 09:53:34] Threads: 10
[2025-04-18 09:53:34] Checking for CVMFS
[2025-04-18 09:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 09:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 09:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 09:53:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 09:53:38] 2.12.6.0 1693551 123528 222812 145003 0 230 18091776 32935936 15830 130560 0 88329907 99.607 96829355 24831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 09:53:38] CVMFS is ok
[2025-04-18 09:53:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 09:53:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 09:53:38] Further information can be found at the LHC@home message board.
[2025-04-18 09:53:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 09:53:38] Checking for apptainer binary...
[2025-04-18 09:53:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 09:53:38] Running /usr/bin/apptainer --version
[2025-04-18 09:53:38] apptainer version 1.4.0-1.el9
[2025-04-18 09:53:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 09:53:39] c-4-36.aglt2.org
[2025-04-18 09:53:39] apptainer works
[2025-04-18 09:53:39] Set ATHENA_PROC_NUMBER=10
[2025-04-18 09:53:39] Set ATHENA_CORE_NUMBER=10
[2025-04-18 09:53:39] Starting ATLAS job with PandaID=6606295801
[2025-04-18 09:53:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:06:50]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:06:50] 2025-04-19 10:06:09,698 | INFO     | PID=2030914 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 06:06:50] 2025-04-19 10:06:09,698 | INFO     | .. there are 42 such processes running
[2025-04-19 06:06:50] 2025-04-19 10:06:12,168 | INFO     | monitor loop #3530: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:12,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:14,693 | INFO     | monitor loop #3531: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:14,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:17,225 | INFO     | monitor loop #3532: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:17,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:19,779 | INFO     | monitor loop #3533: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:19,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:22,290 | INFO     | monitor loop #3534: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:22,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:24,797 | INFO     | monitor loop #3535: job 0:6606295801 is in state 'finished'
[2025-04-19 06:06:50] 2025-04-19 10:06:24,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:06:50] 2025-04-19 10:06:25,396 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 06:06:50] 2025-04-19 10:06:25,398 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606295801/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:06:50] 2025-04-19 10:06:25,417 | INFO     | extracted standard info from prmon json
[2025-04-19 06:06:50] 2025-04-19 10:06:25,417 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 06:06:50] 2025-04-19 10:06:25,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 06:06:50] 2025-04-19 10:06:25,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 06:06:50] 2025-04-19 10:06:25,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 06:06:50] 2025-04-19 10:06:25,798 | INFO     | fitting pss+swap vs Time
[2025-04-19 06:06:50] 2025-04-19 10:06:25,801 | INFO     | sum of square deviations: 521213255277.3659
[2025-04-19 06:06:50] 2025-04-19 10:06:26,325 | INFO     | sum of deviations: 1799796560993.4868
[2025-04-19 06:06:50] 2025-04-19 10:06:26,326 | INFO     | mean x: 1745020868.6585367
[2025-04-19 06:06:50] 2025-04-19 10:06:26,326 | INFO     | mean y: 2141429.4987384356
[2025-04-19 06:06:50] 2025-04-19 10:06:26,326 | INFO     | -- intersect: -6023573623.742134
[2025-04-19 06:06:50] 2025-04-19 10:06:26,326 | INFO     | intersect: -6023573623.742134
[2025-04-19 06:06:50] 2025-04-19 10:06:26,328 | INFO     | chi2: 13.820922104662367
[2025-04-19 06:06:50] 2025-04-19 10:06:26,330 | INFO     | sum of square deviations: 514665829110.8837
[2025-04-19 06:06:50] 2025-04-19 10:06:26,536 | INFO     | sum of deviations: 2067913391329.9177
[2025-04-19 06:06:50] 2025-04-19 10:06:26,540 | INFO     | mean x: 1745020716.164696
[2025-04-19 06:06:50] 2025-04-19 10:06:26,540 | INFO     | mean y: 2147670.108108108
[2025-04-19 06:06:50] 2025-04-19 10:06:26,541 | INFO     | -- intersect: -7009298404.209841
[2025-04-19 06:06:50] 2025-04-19 10:06:26,541 | INFO     | intersect: -7009298404.209841
[2025-04-19 06:06:50] 2025-04-19 10:06:26,542 | INFO     | chi2: 10.944662102704585
[2025-04-19 06:06:50] 2025-04-19 10:06:26,543 | INFO     | current chi2=10.944662102704585 (change=20.810912471516648 %)
[2025-04-19 06:06:50] 2025-04-19 10:06:26,543 | INFO     | right removable region: 1183
[2025-04-19 06:06:50] 2025-04-19 10:06:26,549 | INFO     | sum of square deviations: 514664698473.5538
[2025-04-19 06:06:50] 2025-04-19 10:06:26,627 | INFO     | sum of deviations: 1516297933896.346
[2025-04-19 06:06:50] 2025-04-19 10:06:26,627 | INFO     | mean x: 1745021021.1655405
[2025-04-19 06:06:50] 2025-04-19 10:06:26,627 | INFO     | mean y: 2148028.758445946
[2025-04-19 06:06:50] 2025-04-19 10:06:26,627 | INFO     | -- intersect: -5139008488.964063
[2025-04-19 06:06:50] 2025-04-19 10:06:26,627 | INFO     | intersect: -5139008488.964063
[2025-04-19 06:06:50] 2025-04-19 10:06:26,633 | INFO     | chi2: 11.005175006598373
[2025-04-19 06:06:50] 2025-04-19 10:06:26,634 | INFO     | current chi2=11.005175006598373 (change=20.373076967955175 %)
[2025-04-19 06:06:50] 2025-04-19 10:06:26,634 | INFO     | left removable region: 10
[2025-04-19 06:06:50] 2025-04-19 10:06:26,635 | INFO     | sum of square deviations: 500452623817.8324
[2025-04-19 06:06:50] 2025-04-19 10:06:26,712 | INFO     | sum of deviations: 1576691038875.7068
[2025-04-19 06:06:50] 2025-04-19 10:06:26,713 | INFO     | mean x: 1745020990.678602
[2025-04-19 06:06:50] 2025-04-19 10:06:26,713 | INFO     | mean y: 2159519.2352941176
[2025-04-19 06:06:50] 2025-04-19 10:06:26,713 | INFO     | -- intersect: -5495581580.938197
[2025-04-19 06:06:50] 2025-04-19 10:06:26,713 | INFO     | intersect: -5495581580.938197
[2025-04-19 06:06:50] 2025-04-19 10:06:26,720 | INFO     | chi2: 6.6165904007790015
[2025-04-19 06:06:50] 2025-04-19 10:06:26,721 | INFO     | -- intersect: -5495581580.938197
[2025-04-19 06:06:50] 2025-04-19 10:06:26,721 | INFO     | current memory leak: 3.15 B/s (using 1173 data points, chi2=6.62)
[2025-04-19 06:06:50] 2025-04-19 10:06:26,722 | INFO     | ..............................
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . Timing measurements:
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . get job = 0 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . initial setup = 4 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . payload setup = 46 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . stage-in = 0 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . payload execution = 72507 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . stage-out = 8 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,723 | INFO     | . log creation = 2 s
[2025-04-19 06:06:50] 2025-04-19 10:06:26,724 | INFO     | ..............................
[2025-04-19 06:06:50] 2025-04-19 10:06:27,040 | INFO     | 
[2025-04-19 06:06:50] 2025-04-19 10:06:27,040 | INFO     | job summary report
[2025-04-19 06:06:50] 2025-04-19 10:06:27,040 | INFO     | --------------------------------------------------
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | PanDA job id: 6606295801
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | task id: 44075483
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | errors: (none)
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | pilot state: finished 
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | transexitcode: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | exeerrorcode: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:27,041 | INFO     | exeerrordiag: 
[2025-04-19 06:06:50] 2025-04-19 10:06:27,042 | INFO     | exitcode: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | exitmsg: OK
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | cpuconsumptiontime: 52061 s
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | nevents: 400
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | neventsw: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | pid: 2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:27,046 | INFO     | pgrp: 2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | corecount: 10
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | event service: False
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | sizes: {0: 2425996, 1: 2426597, 2: 2426880, 13: 2426880, 25: 2426936, 34: 2427170, 36: 2427326, 72559: 2481739, 72569: 2490680, 72570: 2490736, 72631: 2490906}
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | --------------------------------------------------
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | 
[2025-04-19 06:06:50] 2025-04-19 10:06:27,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 06:06:50] 2025-04-19 10:06:27,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:06:50] 2025-04-19 10:06:27,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:06:50] 2025-04-19 10:06:27,216 | INFO     | job 6606295801 has completed (purged errors)
[2025-04-19 06:06:50] 2025-04-19 10:06:27,216 | INFO     | overall cleanup function is called
[2025-04-19 06:06:50] 2025-04-19 10:06:28,333 | INFO     | --- collectZombieJob: --- 10, [2044537]
[2025-04-19 06:06:50] 2025-04-19 10:06:28,333 | INFO     | zombie collector waiting for pid 2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:28,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:06:50] 2025-04-19 10:06:28,333 | INFO     | collected zombie processes
[2025-04-19 06:06:50] 2025-04-19 10:06:28,334 | INFO     | will attempt to kill all subprocesses of pid=2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:32,389 | INFO     | process IDs to be killed: [2044537] (in reverse order)
[2025-04-19 06:06:50] 2025-04-19 10:06:33,895 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:06:50] 2025-04-19 10:06:33,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:06:50] 2025-04-19 10:06:34,083 | INFO     | did not find any defunct processes belonging to 2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:34,487 | INFO     | did not find any defunct processes belonging to 2044537
[2025-04-19 06:06:50] 2025-04-19 10:06:34,488 | INFO     | ready for new job
[2025-04-19 06:06:50] 2025-04-19 10:06:34,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:06:50] 2025-04-19 10:06:34,496 | INFO     | **************************************
[2025-04-19 06:06:50] 2025-04-19 10:06:34,496 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:06:50] 2025-04-19 10:06:34,497 | INFO     | **************************************
[2025-04-19 06:06:50] 2025-04-19 10:06:34,570 | INFO     | 
[2025-04-19 06:06:50] 2025-04-19 10:06:34,572 | INFO     | architecture information:
[2025-04-19 06:06:50] 2025-04-19 10:06:34,604 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:06:50] 2025-04-19 10:06:34,934 | INFO     | cat /etc/os-release:
[2025-04-19 06:06:50] NAME="CentOS Linux"
[2025-04-19 06:06:50] VERSION="7 (Core)"
[2025-04-19 06:06:50] ID="centos"
[2025-04-19 06:06:50] ID_LIKE="rhel fedora"
[2025-04-19 06:06:50] VERSION_ID="7"
[2025-04-19 06:06:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:06:50] ANSI_COLOR="0;31"
[2025-04-19 06:06:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:06:50] HOME_URL="https://www.centos.org/"
[2025-04-19 06:06:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:06:50] 
[2025-04-19 06:06:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:06:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:06:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:06:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:06:50] 
[2025-04-19 06:06:50] 2025-04-19 10:06:34,934 | INFO     | **************************************
[2025-04-19 06:06:50] 2025-04-19 10:06:35,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:06:50] 2025-04-19 10:06:35,660 | INFO     | sufficient remaining disk space (75625398272 B)
[2025-04-19 06:06:50] 2025-04-19 10:06:35,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:06:50] 2025-04-19 10:06:35,660 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:06:50] 2025-04-19 10:06:35,661 | INFO     | update_server=False
[2025-04-19 06:06:50] 2025-04-19 10:06:35,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:06:50] 2025-04-19 10:06:35,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:06:50] 2025-04-19 10:06:36,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:06:50] 2025-04-19 10:06:36,149 | INFO     | aborting loop
[2025-04-19 06:06:50] 2025-04-19 10:06:36,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:06:50] 2025-04-19 10:06:36,509 | INFO     | all payload control threads have been joined
[2025-04-19 06:06:50] 2025-04-19 10:06:36,830 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:36,832 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:36,832 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:36,833 | INFO     | all data control threads have been joined
[2025-04-19 06:06:50] 2025-04-19 10:06:36,852 | INFO     | [job] validate thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:36,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:06:50] 2025-04-19 10:06:36,876 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:36,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,057 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,155 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,194 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,593 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,599 | INFO     | [payload] control thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,836 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,839 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,886 | INFO     | [data] control thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:37,970 | INFO     | all job control threads have been joined
[2025-04-19 06:06:50] 2025-04-19 10:06:38,901 | INFO     | PID=2030914 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 06:06:50] 2025-04-19 10:06:38,901 | INFO     | .. there are 42 such processes running
[2025-04-19 06:06:50] 2025-04-19 10:06:38,901 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:06:50] 2025-04-19 10:06:38,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:06:50] 2025-04-19 10:06:38,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:06:50] 2025-04-19 10:06:38,976 | INFO     | [job] control thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:40,913 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:06:50] 2025-04-19 10:06:40,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852162299712)>', '<ExcThread(monitor, started 139851819104000)>']
[2025-04-19 06:06:50] 2025-04-19 10:06:41,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:06:50] 2025-04-19 10:06:41,924 | INFO     | [monitor] control thread has ended
[2025-04-19 06:06:50] 2025-04-19 10:06:46,004 | INFO     | all workflow threads have been joined
[2025-04-19 06:06:50] 2025-04-19 10:06:46,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:06:50] 2025-04-19 10:06:46,004 | INFO     | traces error code: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:46,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:06:50] 2025-04-19 10:06:47,026 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:06:50] 2025-04-19 10:06:47,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:06:50] 2025-04-19 10:06:47,150 [wrapper] pilotpid: 2030914
[2025-04-19 06:06:50] 2025-04-19 10:06:47,203 [wrapper] Pilot exit status: 0
[2025-04-19 06:06:50] 2025-04-19 10:06:47,430 [wrapper] pandaids: 6606295801
[2025-04-19 06:06:50] 2025-04-19 10:06:48,632 [wrapper] cleanup supervisor_pilot 3797013 2030916
[2025-04-19 06:06:50] 2025-04-19 10:06:48,692 [wrapper] Test setup, not cleaning
[2025-04-19 06:06:50] 2025-04-19 10:06:48,731 [wrapper] apfmon messages muted
[2025-04-19 06:06:50] 2025-04-19 10:06:48,784 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:06:50] 2025-04-19 10:06:48,839 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:06:50]  *** Error codes and diagnostics ***
[2025-04-19 06:06:50]     "exeErrorCode": 0,
[2025-04-19 06:06:50]     "exeErrorDiag": "",
[2025-04-19 06:06:50]     "pilotErrorCode": 0,
[2025-04-19 06:06:50]     "pilotErrorDiag": "",
[2025-04-19 06:06:50]  *** Listing of results directory ***
[2025-04-19 06:06:50] total 422328
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 06:20 pilot3.tar.gz
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 06:27 queuedata.json
[2025-04-19 06:06:50] -rwx------. 1 boincer umatlas     37140 Apr 18 06:28 runpilot2-wrapper.sh
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas       100 Apr 18 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:06:50] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 09:53 run_atlas
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas       105 Apr 18 09:53 job.xml
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas 224820128 Apr 18 09:53 EVNT.44075481._002646.pool.root.1
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 09:53 start_atlas.sh
[2025-04-19 06:06:50] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 09:53 shared
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas    508891 Apr 18 09:53 input.tar.gz
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas         0 Apr 18 09:53 boinc_lockfile
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas      2579 Apr 18 09:53 pandaJob.out
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas       467 Apr 18 09:53 setup.sh.local
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas    990604 Apr 18 09:54 agis_schedconf.cvmfs.json
[2025-04-19 06:06:50] drwx------. 4 boincer umatlas      4096 Apr 18 09:54 pilot3
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas 192186263 Apr 19 06:01 HITS.44075483._068058.pool.root.1
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas       531 Apr 19 06:01 boinc_task_state.xml
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas      6672 Apr 19 06:02 init_data.xml
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas      1048 Apr 19 06:05 memory_monitor_summary.json
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas   1618536 Apr 19 06:05 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas    849548 Apr 19 06:05 log.44075483._068058.job.log.tgz.1
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas      7731 Apr 19 06:06 heartbeat.json
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas        95 Apr 19 06:06 pilot_heartbeat.json
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 06:06 boinc_mmap_file
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas        28 Apr 19 06:06 wrapper_checkpoint.txt
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas      4748 Apr 19 06:06 pilotlog.txt
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas   4948593 Apr 19 06:06 log.44075483._068058.job.log.1
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas       357 Apr 19 06:06 output.list
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas       620 Apr 19 06:06 runtime_log
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas   5816320 Apr 19 06:06 result.tar.gz
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas     11411 Apr 19 06:06 runtime_log.err
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas       659 Apr 19 06:06 faoLDm87xP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmm5eLDmk6JKan.diag
[2025-04-19 06:06:50] -rw-r--r--. 1 boincer umatlas     21622 Apr 19 06:06 stderr.txt
[2025-04-19 06:06:50] HITS file was successfully produced:
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas 192186263 Apr 19 06:01 shared/HITS.pool.root.1
[2025-04-19 06:06:50]  *** Contents of shared directory: ***
[2025-04-19 06:06:50] total 413440
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas 224820128 Apr 18 09:53 ATLAS.root_0
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 09:53 start_atlas.sh
[2025-04-19 06:06:50] -rw-r--r--. 2 boincer umatlas    508891 Apr 18 09:53 input.tar.gz
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas 192186263 Apr 19 06:01 HITS.pool.root.1
[2025-04-19 06:06:50] -rw-------. 1 boincer umatlas   5816320 Apr 19 06:06 result.tar.gz
06:06:51 (2022081): run_atlas exited; CPU time 55486.507428
06:06:51 (2022081): called boinc_finish(0)

</stderr_txt>
]]>

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