Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:55:16 (1041852): wrapper (7.7.26015): starting
17:55:16 (1041852): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 17:55:16] Arguments: --nthreads 3
[2025-04-19 17:55:16] Threads: 3
[2025-04-19 17:55:16] Checking for CVMFS
[2025-04-19 17:55:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 17:55:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 17:55:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 17:55:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 17:55:17] 2.9.2.0 2882 4383 77972 145043 1 56 26566515 36864001 0 130560 0 2683871 99.986 1099899 13458 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 17:55:17] CVMFS is ok
[2025-04-19 17:55:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 17:55:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 17:55:17] Further information can be found at the LHC@home message board.
[2025-04-19 17:55:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 17:55:17] Checking for apptainer binary...
[2025-04-19 17:55:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 17:55:17] Running /usr/bin/apptainer --version
[2025-04-19 17:55:17] apptainer version 1.3.6-6.1
[2025-04-19 17:55:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 17:55:17] thA333
[2025-04-19 17:55:17] apptainer works
[2025-04-19 17:55:17] Set ATHENA_PROC_NUMBER=3
[2025-04-19 17:55:17] Set ATHENA_CORE_NUMBER=3
[2025-04-19 17:55:17] Starting ATLAS job with PandaID=6606295816
[2025-04-19 17:55:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 19:33:26]  *** The last 200 lines of the pilot log: ***
[2025-04-19 19:33:26]  protocol_id=None
[2025-04-19 19:33:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 19:33:26]  replicas=None
[2025-04-19 19:33:26]  scope=mc23_13p6TeV
[2025-04-19 19:33:26]  status=None
[2025-04-19 19:33:26]  status_code=0
[2025-04-19 19:33:26]  storage_token=
[2025-04-19 19:33:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606295816/log.44075483._068073.job.log.tgz.1
[2025-04-19 19:33:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/9e/log.44075483._068073.job.log.tgz.1
[2025-04-19 19:33:26]  workdir=None
[2025-04-19 19:33:26] ]
[2025-04-19 19:33:26] 2025-04-19 17:32:57,731 | INFO     | transferring file log.44075483._068073.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606295816/log.44075483._068073.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 19:33:26] 2025-04-19 17:32:57,732 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606295816/log.44075483._068073.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0680
[2025-04-19 19:33:26] 2025-04-19 17:32:57,744 | INFO     | adding to output.list: log.44075483._068073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/9e/log.44075483._068073.job.log.tg
[2025-04-19 19:33:26] 2025-04-19 17:32:57,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 19:33:26] 2025-04-19 17:32:57,745 | INFO     | summary of transferred files:
[2025-04-19 19:33:26] 2025-04-19 17:32:57,745 | INFO     |  -- lfn=log.44075483._068073.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 19:33:26] 2025-04-19 17:32:57,745 | INFO     | stage-out finished correctly
[2025-04-19 19:33:26] 2025-04-19 17:32:58,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 19:33:26] 2025-04-19 17:32:59,634 | INFO     | monitor loop #451: job 0:6606295816 is in state 'finished'
[2025-04-19 19:33:26] 2025-04-19 17:32:59,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:33:26] 2025-04-19 17:33:01,564 | INFO     | job 6606295816 has state=finished
[2025-04-19 19:33:26] 2025-04-19 17:33:01,564 | INFO     | preparing for final server update for job 6606295816 in state='finished'
[2025-04-19 19:33:26] 2025-04-19 17:33:02,137 | INFO     | monitor loop #452: job 0:6606295816 is in state 'finished'
[2025-04-19 19:33:26] 2025-04-19 17:33:02,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:33:26] 2025-04-19 17:33:02,147 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-19 19:33:26] 2025-04-19 17:33:02,147 | INFO     | this job has now completed (state=finished)
[2025-04-19 19:33:26] 2025-04-19 17:33:02,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 19:33:26] 2025-04-19 17:33:02,148 | INFO     | log transfer has been attempted: DONE
[2025-04-19 19:33:26] 2025-04-19 17:33:02,148 | INFO     | job 6606295816 has finished - writing final server update
[2025-04-19 19:33:26] 2025-04-19 17:33:02,148 | INFO     | total number of processed events: 400 (read)
[2025-04-19 19:33:26] 2025-04-19 17:33:02,149 | INFO     | executing command: lscpu
[2025-04-19 19:33:26] 2025-04-19 17:33:02,162 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 19:33:26] 2025-04-19 17:33:04,642 | INFO     | monitor loop #453: job 0:6606295816 is in state 'finished'
[2025-04-19 19:33:26] 2025-04-19 17:33:04,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:33:26] 2025-04-19 17:33:05,889 | INFO     | PID=1045507 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 19:33:26] 2025-04-19 17:33:07,145 | INFO     | monitor loop #454: job 0:6606295816 is in state 'finished'
[2025-04-19 19:33:26] 2025-04-19 17:33:07,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,736 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 19:33:26] 2025-04-19 17:33:07,736 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606295816/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,736 | INFO     | extracted standard info from prmon json
[2025-04-19 19:33:26] 2025-04-19 17:33:07,736 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 19:33:26] 2025-04-19 17:33:07,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 19:33:26] 2025-04-19 17:33:07,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 19:33:26] 2025-04-19 17:33:07,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 19:33:26] 2025-04-19 17:33:07,737 | INFO     | fitting pss+swap vs Time
[2025-04-19 19:33:26] 2025-04-19 17:33:07,737 | INFO     | sum of square deviations: 218571540.0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | sum of deviations: 8009867971.0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | mean x: 1745081142.0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | mean y: 2341498.179775281
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | -- intersect: -63948663038.37564
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | intersect: -63948663038.37564
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | chi2: 1.329924719981022
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | -- intersect: -63948663038.37564
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | current memory leak: 36.65 B/s (using 89 data points, chi2=1.33)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | ..............................
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . Timing measurements:
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . get job = 0 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . initial setup = 1 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . payload setup = 6 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . stage-in = 0 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . payload execution = 5824 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . stage-out = 0 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | . log creation = 0 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,738 | INFO     | ..............................
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | 
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | job summary report
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | --------------------------------------------------
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | PanDA job id: 6606295816
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | task id: 44075483
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | errors: (none)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | pilot state: finished 
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | transexitcode: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | exeerrorcode: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | exeerrordiag: 
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | exitcode: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | exitmsg: OK
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | cpuconsumptiontime: 15459 s
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | nevents: 400
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | neventsw: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | pid: 1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | pgrp: 1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | corecount: 3
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | event service: False
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | sizes: {0: 2426827, 5: 2427033, 10: 2427089, 5833: 2453756, 5834: 2462703, 5835: 2462759, 5844: 2463057}
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | --------------------------------------------------
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | 
[2025-04-19 19:33:26] 2025-04-19 17:33:07,770 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | job 6606295816 has completed (purged errors)
[2025-04-19 19:33:26] 2025-04-19 17:33:07,783 | INFO     | overall cleanup function is called
[2025-04-19 19:33:26] 2025-04-19 17:33:08,790 | INFO     | --- collectZombieJob: --- 10, [1051950]
[2025-04-19 19:33:26] 2025-04-19 17:33:08,790 | INFO     | zombie collector waiting for pid 1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:08,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 19:33:26] 2025-04-19 17:33:08,791 | INFO     | collected zombie processes
[2025-04-19 19:33:26] 2025-04-19 17:33:08,791 | INFO     | will attempt to kill all subprocesses of pid=1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:08,831 | INFO     | process IDs to be killed: [1051950] (in reverse order)
[2025-04-19 19:33:26] 2025-04-19 17:33:08,856 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 19:33:26] 2025-04-19 17:33:08,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 19:33:26] 2025-04-19 17:33:08,858 | INFO     | did not find any defunct processes belonging to 1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | did not find any defunct processes belonging to 1051950
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | ready for new job
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | **************************************
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | **************************************
[2025-04-19 19:33:26] 2025-04-19 17:33:08,859 | INFO     | 
[2025-04-19 19:33:26] 2025-04-19 17:33:08,860 | INFO     | architecture information:
[2025-04-19 19:33:26] 2025-04-19 17:33:08,860 | INFO     | executing command: cat /etc/os-release
[2025-04-19 19:33:26] 2025-04-19 17:33:08,870 | INFO     | cat /etc/os-release:
[2025-04-19 19:33:26] NAME="CentOS Linux"
[2025-04-19 19:33:26] VERSION="7 (Core)"
[2025-04-19 19:33:26] ID="centos"
[2025-04-19 19:33:26] ID_LIKE="rhel fedora"
[2025-04-19 19:33:26] VERSION_ID="7"
[2025-04-19 19:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 19:33:26] ANSI_COLOR="0;31"
[2025-04-19 19:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 19:33:26] HOME_URL="https://www.centos.org/"
[2025-04-19 19:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 19:33:26] 
[2025-04-19 19:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 19:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 19:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 19:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 19:33:26] 
[2025-04-19 19:33:26] 2025-04-19 17:33:08,870 | INFO     | **************************************
[2025-04-19 19:33:26] 2025-04-19 17:33:09,373 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | INFO     | sufficient remaining disk space (228823400448 B)
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | INFO     | update_server=False
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:33:26] 2025-04-19 17:33:09,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 19:33:26] 2025-04-19 17:33:09,413 | INFO     | all payload control threads have been joined
[2025-04-19 19:33:26] 2025-04-19 17:33:09,649 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 19:33:26] 2025-04-19 17:33:09,650 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 19:33:26] 2025-04-19 17:33:09,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:33:26] 2025-04-19 17:33:09,650 | INFO     | will abort loop
[2025-04-19 19:33:26] 2025-04-19 17:33:09,715 | INFO     | all data control threads have been joined
[2025-04-19 19:33:26] 2025-04-19 17:33:09,901 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 19:33:26] 2025-04-19 17:33:09,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 19:33:26] 2025-04-19 17:33:09,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 19:33:26] 2025-04-19 17:33:10,393 | INFO     | [job] retrieve thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,394 | INFO     | [job] queue monitor thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,419 | INFO     | [payload] control thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,442 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,513 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,656 | INFO     | [job] job monitor thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,688 | INFO     | all job control threads have been joined
[2025-04-19 19:33:26] 2025-04-19 17:33:10,711 | INFO     | [payload] failed_post thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,721 | INFO     | [data] control thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:10,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 19:33:26] 2025-04-19 17:33:11,275 | INFO     | [payload] validate_post thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:11,276 | INFO     | [data] copytool_in thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:11,480 | INFO     | [job] validate thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:11,678 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:11,694 | INFO     | [job] control thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:12,802 | INFO     | [data] copytool_out thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:13,394 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:20,123 | INFO     | job.realtimelogging is not enabled
[2025-04-19 19:33:26] 2025-04-19 17:33:21,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 19:33:26] 2025-04-19 17:33:21,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984399406912)>', '<ExcThread(monitor, started 139983763523328)>']
[2025-04-19 19:33:26] 2025-04-19 17:33:21,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 19:33:26] 2025-04-19 17:33:21,967 | INFO     | [monitor] control thread has ended
[2025-04-19 19:33:26] 2025-04-19 17:33:26,259 | INFO     | all workflow threads have been joined
[2025-04-19 19:33:26] 2025-04-19 17:33:26,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 19:33:26] 2025-04-19 17:33:26,260 | INFO     | traces error code: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:26,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 19:33:26] 2025-04-19 17:33:26,308 [wrapper] ==== pilot stdout END ====
[2025-04-19 19:33:26] 2025-04-19 17:33:26,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 19:33:26] 2025-04-19 17:33:26,314 [wrapper] pilotpid: 1045507
[2025-04-19 19:33:26] 2025-04-19 17:33:26,317 [wrapper] Pilot exit status: 0
[2025-04-19 19:33:26] 2025-04-19 17:33:26,325 [wrapper] pandaids: 6606295816
[2025-04-19 19:33:26] 2025-04-19 17:33:26,341 [wrapper] cleanup supervisor_pilot 1064521 1045508
[2025-04-19 19:33:26] 2025-04-19 17:33:26,345 [wrapper] Test setup, not cleaning
[2025-04-19 19:33:26] 2025-04-19 17:33:26,347 [wrapper] apfmon messages muted
[2025-04-19 19:33:26] 2025-04-19 17:33:26,350 [wrapper] ==== wrapper stdout END ====
[2025-04-19 19:33:26] 2025-04-19 17:33:26,353 [wrapper] ==== wrapper stderr END ====
[2025-04-19 19:33:26]  *** Error codes and diagnostics ***
[2025-04-19 19:33:26]     "exeErrorCode": 0,
[2025-04-19 19:33:26]     "exeErrorDiag": "",
[2025-04-19 19:33:26]     "pilotErrorCode": 0,
[2025-04-19 19:33:26]     "pilotErrorDiag": "",
[2025-04-19 19:33:26]  *** Listing of results directory ***
[2025-04-19 19:33:26] total 414120
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc    495897 Apr 18 12:20 pilot3.tar.gz
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc      5111 Apr 18 12:25 queuedata.json
[2025-04-19 19:33:26] -rwx------ 1 boinc boinc     37140 Apr 18 12:25 runpilot2-wrapper.sh
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc       100 Apr 19 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 19:33:26] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 17:55 run_atlas
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc       105 Apr 19 17:55 job.xml
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc 224820128 Apr 19 17:55 EVNT.44075481._002646.pool.root.1
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc      6680 Apr 19 17:55 init_data.xml
[2025-04-19 19:33:26] drwxrwx--x 2 boinc boinc      4096 Apr 19 17:55 shared
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc    508891 Apr 19 17:55 input.tar.gz
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:55 start_atlas.sh
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc         0 Apr 19 17:55 boinc_lockfile
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc      2579 Apr 19 17:55 pandaJob.out
[2025-04-19 19:33:26] -rw------- 1 boinc boinc       424 Apr 19 17:55 setup.sh.local
[2025-04-19 19:33:26] -rw------- 1 boinc boinc    991300 Apr 19 17:55 agis_schedconf.cvmfs.json
[2025-04-19 19:33:26] -rw------- 1 boinc boinc   1618536 Apr 19 17:55 agis_ddmendpoints.agis.ALL.json
[2025-04-19 19:33:26] drwx------ 4 boinc boinc      4096 Apr 19 17:55 pilot3
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc       529 Apr 19 19:32 boinc_task_state.xml
[2025-04-19 19:33:26] -rw------- 1 boinc boinc 193746183 Apr 19 19:32 HITS.44075483._068073.pool.root.1
[2025-04-19 19:33:26] -rw------- 1 boinc boinc      1019 Apr 19 19:32 memory_monitor_summary.json
[2025-04-19 19:33:26] -rw------- 1 boinc boinc        95 Apr 19 19:32 pilot_heartbeat.json
[2025-04-19 19:33:26] -rw------- 1 boinc boinc    249133 Apr 19 19:32 log.44075483._068073.job.log.tgz.1
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc      8192 Apr 19 19:33 boinc_mmap_file
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc        27 Apr 19 19:33 wrapper_checkpoint.txt
[2025-04-19 19:33:26] -rw------- 1 boinc boinc      7658 Apr 19 19:33 heartbeat.json
[2025-04-19 19:33:26] -rw------- 1 boinc boinc      4615 Apr 19 19:33 pilotlog.txt
[2025-04-19 19:33:26] -rw------- 1 boinc boinc    562340 Apr 19 19:33 log.44075483._068073.job.log.1
[2025-04-19 19:33:26] -rw------- 1 boinc boinc       357 Apr 19 19:33 output.list
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc       620 Apr 19 19:33 runtime_log
[2025-04-19 19:33:26] -rw------- 1 boinc boinc    829440 Apr 19 19:33 result.tar.gz
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc     11099 Apr 19 19:33 runtime_log.err
[2025-04-19 19:33:26] -rw------- 1 boinc boinc       658 Apr 19 19:33 L1zMDm35xP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmO5eLDmKDENQn.diag
[2025-04-19 19:33:26] -rw-r--r-- 1 boinc boinc     21778 Apr 19 19:33 stderr.txt
[2025-04-19 19:33:26] HITS file was successfully produced:
[2025-04-19 19:33:26] -rw------- 1 boinc boinc 193746183 Apr 19 19:32 shared/HITS.pool.root.1
[2025-04-19 19:33:26]  *** Contents of shared directory: ***
[2025-04-19 19:33:26] total 410100
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc 224820128 Apr 19 17:55 ATLAS.root_0
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc    508891 Apr 19 17:55 input.tar.gz
[2025-04-19 19:33:26] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:55 start_atlas.sh
[2025-04-19 19:33:26] -rw------- 1 boinc boinc 193746183 Apr 19 19:32 HITS.pool.root.1
[2025-04-19 19:33:26] -rw------- 1 boinc boinc    829440 Apr 19 19:33 result.tar.gz
19:33:27 (1041852): run_atlas exited; CPU time 15489.312975
19:33:27 (1041852): called boinc_finish(0)

</stderr_txt>
]]>

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