Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:46 (14487): wrapper (7.7.26015): starting
10:08:46 (14487): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 10:08:46] Arguments: --nthreads 12
[2025-04-18 10:08:46] Threads: 12
[2025-04-18 10:08:46] Checking for CVMFS
[2025-04-18 10:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 10:08:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 10:08:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 10:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 10:08:47] 2.11.2.0 14409 376859 168064 145004 2 55 17963399 20275201 1 130560 0 22974038 99.990 6907423 54672 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 10:08:47] CVMFS is ok
[2025-04-18 10:08:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 10:08:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 10:08:47] Further information can be found at the LHC@home message board.
[2025-04-18 10:08:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 10:08:47] Checking for apptainer binary...
[2025-04-18 10:08:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 10:08:47] Running /usr/bin/apptainer --version
[2025-04-18 10:08:47] apptainer version 1.3.2-1.el7
[2025-04-18 10:08:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 10:08:48] c-205-32.aglt2.org
[2025-04-18 10:08:48] apptainer works
[2025-04-18 10:08:48] Set ATHENA_PROC_NUMBER=12
[2025-04-18 10:08:48] Set ATHENA_CORE_NUMBER=12
[2025-04-18 10:08:48] Starting ATLAS job with PandaID=6606295699
[2025-04-18 10:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 11:31:51]  *** The last 200 lines of the pilot log: ***
[2025-04-18 11:31:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 11:31:51]  replicas=None
[2025-04-18 11:31:51]  scope=mc23_13p6TeV
[2025-04-18 11:31:51]  status=None
[2025-04-18 11:31:51]  status_code=0
[2025-04-18 11:31:51]  storage_token=
[2025-04-18 11:31:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606295699/log.44075483._067956.job.log.tgz.1
[2025-04-18 11:31:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/ee/log.44075483._067956.job.log.tgz.1
[2025-04-18 11:31:51]  workdir=None
[2025-04-18 11:31:51] ]
[2025-04-18 11:31:51] 2025-04-18 15:31:24,289 | INFO     | transferring file log.44075483._067956.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606295699/log.44075483._067956.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 11:31:51] 2025-04-18 15:31:24,290 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606295699/log.44075483._067956.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._067956.job
[2025-04-18 11:31:51] 2025-04-18 15:31:24,312 | INFO     | adding to output.list: log.44075483._067956.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/ee/log.44075483._067956.job.log.tg
[2025-04-18 11:31:51] 2025-04-18 15:31:24,313 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 11:31:51] 2025-04-18 15:31:24,313 | INFO     | summary of transferred files:
[2025-04-18 11:31:51] 2025-04-18 15:31:24,314 | INFO     |  -- lfn=log.44075483._067956.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 11:31:51] 2025-04-18 15:31:24,314 | INFO     | stage-out finished correctly
[2025-04-18 11:31:51] 2025-04-18 15:31:24,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 11:31:51] 2025-04-18 15:31:24,584 | INFO     | monitor loop #368: job 0:6606295699 is in state 'finished'
[2025-04-18 11:31:51] 2025-04-18 15:31:24,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:31:51] 2025-04-18 15:31:25,818 | INFO     | PID=18417 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 11:31:51] 2025-04-18 15:31:27,087 | INFO     | monitor loop #369: job 0:6606295699 is in state 'finished'
[2025-04-18 11:31:51] 2025-04-18 15:31:27,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:31:51] 2025-04-18 15:31:27,451 | INFO     | job 6606295699 has state=finished
[2025-04-18 11:31:51] 2025-04-18 15:31:27,452 | INFO     | preparing for final server update for job 6606295699 in state='finished'
[2025-04-18 11:31:51] 2025-04-18 15:31:27,524 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-18 11:31:51] 2025-04-18 15:31:27,524 | INFO     | this job has now completed (state=finished)
[2025-04-18 11:31:51] 2025-04-18 15:31:27,524 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 11:31:51] 2025-04-18 15:31:27,524 | INFO     | log transfer has been attempted: DONE
[2025-04-18 11:31:51] 2025-04-18 15:31:27,524 | INFO     | job 6606295699 has finished - writing final server update
[2025-04-18 11:31:51] 2025-04-18 15:31:27,525 | INFO     | total number of processed events: 400 (read)
[2025-04-18 11:31:51] 2025-04-18 15:31:27,526 | INFO     | executing command: lscpu
[2025-04-18 11:31:51] 2025-04-18 15:31:27,554 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 11:31:51] 2025-04-18 15:31:29,597 | INFO     | monitor loop #370: job 0:6606295699 is in state 'finished'
[2025-04-18 11:31:51] 2025-04-18 15:31:29,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,100 | INFO     | monitor loop #371: job 0:6606295699 is in state 'finished'
[2025-04-18 11:31:51] 2025-04-18 15:31:32,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,410 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 11:31:51] 2025-04-18 15:31:32,410 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606295699/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,411 | INFO     | extracted standard info from prmon json
[2025-04-18 11:31:51] 2025-04-18 15:31:32,412 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 11:31:51] 2025-04-18 15:31:32,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 11:31:51] 2025-04-18 15:31:32,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 11:31:51] 2025-04-18 15:31:32,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 11:31:51] 2025-04-18 15:31:32,415 | INFO     | fitting pss+swap vs Time
[2025-04-18 11:31:51] 2025-04-18 15:31:32,415 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 11:31:51] 2025-04-18 15:31:32,416 | INFO     | sum of deviations: 28544092340.0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,416 | INFO     | mean x: 1744987898.5
[2025-04-18 11:31:51] 2025-04-18 15:31:32,416 | INFO     | mean y: 2543568.3513513515
[2025-04-18 11:31:51] 2025-04-18 15:31:32,417 | INFO     | -- intersect: -396471162016.45184
[2025-04-18 11:31:51] 2025-04-18 15:31:32,417 | INFO     | intersect: -396471162016.45184
[2025-04-18 11:31:51] 2025-04-18 15:31:32,417 | INFO     | chi2: 2.6415653648508917
[2025-04-18 11:31:51] 2025-04-18 15:31:32,417 | INFO     | -- intersect: -396471162016.45184
[2025-04-18 11:31:51] 2025-04-18 15:31:32,418 | INFO     | current memory leak: 227.21 B/s (using 74 data points, chi2=2.64)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,418 | INFO     | ..............................
[2025-04-18 11:31:51] 2025-04-18 15:31:32,418 | INFO     | . Timing measurements:
[2025-04-18 11:31:51] 2025-04-18 15:31:32,418 | INFO     | . get job = 0 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . initial setup = 2 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . payload setup = 6 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . stage-in = 0 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . payload execution = 4917 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . stage-out = 0 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,419 | INFO     | . log creation = 0 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,420 | INFO     | ..............................
[2025-04-18 11:31:51] 2025-04-18 15:31:32,697 | INFO     | 
[2025-04-18 11:31:51] 2025-04-18 15:31:32,697 | INFO     | job summary report
[2025-04-18 11:31:51] 2025-04-18 15:31:32,697 | INFO     | --------------------------------------------------
[2025-04-18 11:31:51] 2025-04-18 15:31:32,697 | INFO     | PanDA job id: 6606295699
[2025-04-18 11:31:51] 2025-04-18 15:31:32,697 | INFO     | task id: 44075483
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | errors: (none)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | pilot state: finished 
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | transexitcode: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | exeerrorcode: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,698 | INFO     | exeerrordiag: 
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | exitcode: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | exitmsg: OK
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | cpuconsumptiontime: 46268 s
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | nevents: 400
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | neventsw: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | pid: 24816
[2025-04-18 11:31:51] 2025-04-18 15:31:32,699 | INFO     | pgrp: 24816
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | corecount: 12
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | event service: False
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | sizes: {0: 2425996, 1: 2426852, 5: 2427058, 12: 2427114, 4927: 2453244, 4928: 2462368, 4929: 2462368, 4937: 2462538}
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | --------------------------------------------------
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | 
[2025-04-18 11:31:51] 2025-04-18 15:31:32,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 11:31:51] 2025-04-18 15:31:32,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 11:31:51] 2025-04-18 15:31:32,728 | INFO     | job 6606295699 has completed (purged errors)
[2025-04-18 11:31:51] 2025-04-18 15:31:32,728 | INFO     | overall cleanup function is called
[2025-04-18 11:31:51] 2025-04-18 15:31:33,736 | INFO     | --- collectZombieJob: --- 10, [24816]
[2025-04-18 11:31:51] 2025-04-18 15:31:33,736 | INFO     | zombie collector waiting for pid 24816
[2025-04-18 11:31:51] 2025-04-18 15:31:33,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 11:31:51] 2025-04-18 15:31:33,736 | INFO     | collected zombie processes
[2025-04-18 11:31:51] 2025-04-18 15:31:33,737 | INFO     | will attempt to kill all subprocesses of pid=24816
[2025-04-18 11:31:51] 2025-04-18 15:31:33,827 | INFO     | process IDs to be killed: [24816] (in reverse order)
[2025-04-18 11:31:51] 2025-04-18 15:31:33,875 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 11:31:51] 2025-04-18 15:31:33,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 11:31:51] 2025-04-18 15:31:33,879 | INFO     | did not find any defunct processes belonging to 24816
[2025-04-18 11:31:51] 2025-04-18 15:31:33,882 | INFO     | did not find any defunct processes belonging to 24816
[2025-04-18 11:31:51] 2025-04-18 15:31:33,882 | INFO     | ready for new job
[2025-04-18 11:31:51] 2025-04-18 15:31:33,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 11:31:51] 2025-04-18 15:31:33,883 | INFO     | **************************************
[2025-04-18 11:31:51] 2025-04-18 15:31:33,883 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 11:31:51] 2025-04-18 15:31:33,883 | INFO     | **************************************
[2025-04-18 11:31:51] 2025-04-18 15:31:33,883 | INFO     | 
[2025-04-18 11:31:51] 2025-04-18 15:31:33,884 | INFO     | architecture information:
[2025-04-18 11:31:51] 2025-04-18 15:31:33,884 | INFO     | executing command: cat /etc/os-release
[2025-04-18 11:31:51] 2025-04-18 15:31:33,898 | INFO     | cat /etc/os-release:
[2025-04-18 11:31:51] NAME="CentOS Linux"
[2025-04-18 11:31:51] VERSION="7 (Core)"
[2025-04-18 11:31:51] ID="centos"
[2025-04-18 11:31:51] ID_LIKE="rhel fedora"
[2025-04-18 11:31:51] VERSION_ID="7"
[2025-04-18 11:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 11:31:51] ANSI_COLOR="0;31"
[2025-04-18 11:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 11:31:51] HOME_URL="https://www.centos.org/"
[2025-04-18 11:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 11:31:51] 
[2025-04-18 11:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 11:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 11:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 11:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 11:31:51] 
[2025-04-18 11:31:51] 2025-04-18 15:31:33,898 | INFO     | **************************************
[2025-04-18 11:31:51] 2025-04-18 15:31:34,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 11:31:51] 2025-04-18 15:31:34,418 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-04-18 11:31:51] 2025-04-18 15:31:34,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 11:31:51] 2025-04-18 15:31:34,418 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 11:31:51] 2025-04-18 15:31:34,418 | INFO     | update_server=False
[2025-04-18 11:31:51] 2025-04-18 15:31:34,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 11:31:51] 2025-04-18 15:31:34,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:31:51] 2025-04-18 15:31:34,419 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 11:31:51] 2025-04-18 15:31:34,420 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 11:31:51] 2025-04-18 15:31:34,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 11:31:51] 2025-04-18 15:31:34,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 11:31:51] 2025-04-18 15:31:34,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 11:31:51] 2025-04-18 15:31:34,640 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 11:31:51] 2025-04-18 15:31:34,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:31:51] 2025-04-18 15:31:34,640 | INFO     | will abort loop
[2025-04-18 11:31:51] 2025-04-18 15:31:34,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 11:31:51] 2025-04-18 15:31:35,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 11:31:51] 2025-04-18 15:31:35,311 | INFO     | all job control threads have been joined
[2025-04-18 11:31:51] 2025-04-18 15:31:35,320 | INFO     | all data control threads have been joined
[2025-04-18 11:31:51] 2025-04-18 15:31:35,424 | INFO     | [job] retrieve thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,424 | INFO     | [job] queue monitor thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,461 | INFO     | [data] copytool_in thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,598 | INFO     | all payload control threads have been joined
[2025-04-18 11:31:51] 2025-04-18 15:31:35,620 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,624 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,645 | INFO     | [job] job monitor thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:35,664 | INFO     | [payload] validate_post thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,316 | INFO     | [job] control thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,326 | INFO     | [data] control thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,380 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,443 | INFO     | [payload] failed_post thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,604 | INFO     | [payload] control thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,606 | INFO     | [job] validate thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:36,921 | INFO     | [data] copytool_out thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:39,006 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:44,932 | INFO     | job.realtimelogging is not enabled
[2025-04-18 11:31:51] 2025-04-18 15:31:45,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 11:31:51] 2025-04-18 15:31:46,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703676905280)>', '<ExcThread(monitor, started 140703246046976)>']
[2025-04-18 11:31:51] 2025-04-18 15:31:46,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 11:31:51] 2025-04-18 15:31:46,481 | INFO     | [monitor] control thread has ended
[2025-04-18 11:31:51] 2025-04-18 15:31:51,163 | INFO     | all workflow threads have been joined
[2025-04-18 11:31:51] 2025-04-18 15:31:51,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 11:31:51] 2025-04-18 15:31:51,163 | INFO     | traces error code: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:51,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 11:31:51] 2025-04-18 15:31:51,258 [wrapper] ==== pilot stdout END ====
[2025-04-18 11:31:51] 2025-04-18 15:31:51,262 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 11:31:51] 2025-04-18 15:31:51,265 [wrapper] pilotpid: 18417
[2025-04-18 11:31:51] 2025-04-18 15:31:51,269 [wrapper] Pilot exit status: 0
[2025-04-18 11:31:51] 2025-04-18 15:31:51,282 [wrapper] pandaids: 6606295699
[2025-04-18 11:31:51] 2025-04-18 15:31:51,319 [wrapper] cleanup supervisor_pilot 27210 18418
[2025-04-18 11:31:51] 2025-04-18 15:31:51,323 [wrapper] Test setup, not cleaning
[2025-04-18 11:31:51] 2025-04-18 15:31:51,327 [wrapper] apfmon messages muted
[2025-04-18 11:31:51] 2025-04-18 15:31:51,330 [wrapper] ==== wrapper stdout END ====
[2025-04-18 11:31:51] 2025-04-18 15:31:51,334 [wrapper] ==== wrapper stderr END ====
[2025-04-18 11:31:51]  *** Error codes and diagnostics ***
[2025-04-18 11:31:51]     "exeErrorCode": 0,
[2025-04-18 11:31:51]     "exeErrorDiag": "",
[2025-04-18 11:31:51]     "pilotErrorCode": 0,
[2025-04-18 11:31:51]     "pilotErrorDiag": "",
[2025-04-18 11:31:51]  *** Listing of results directory ***
[2025-04-18 11:31:51] total 413456
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 06:19 queuedata.json
[2025-04-18 11:31:51] -rwx------ 1 boincer umatlas     37140 Apr 18 06:20 runpilot2-wrapper.sh
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 06:20 pilot3.tar.gz
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas       100 Apr 18 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 11:31:51] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 10:08 run_atlas
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas       105 Apr 18 10:08 job.xml
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas 222126497 Apr 18 10:08 EVNT.44075481._002642.pool.root.1
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 10:08 start_atlas.sh
[2025-04-18 11:31:51] drwxrwx--x 2 boincer umatlas      4096 Apr 18 10:08 shared
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 10:08 input.tar.gz
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas         0 Apr 18 10:08 boinc_lockfile
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 10:08 pandaJob.out
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas       424 Apr 18 10:08 setup.sh.local
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas    990604 Apr 18 10:08 agis_schedconf.cvmfs.json
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas   1618536 Apr 18 10:08 agis_ddmendpoints.agis.ALL.json
[2025-04-18 11:31:51] drwx------ 4 boincer umatlas      4096 Apr 18 10:09 pilot3
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 11:27 init_data.xml
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas       529 Apr 18 11:30 boinc_task_state.xml
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas 195726015 Apr 18 11:30 HITS.44075483._067956.pool.root.1
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas        95 Apr 18 11:31 pilot_heartbeat.json
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas      1052 Apr 18 11:31 memory_monitor_summary.json
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas    357984 Apr 18 11:31 log.44075483._067956.job.log.tgz.1
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas        27 Apr 18 11:31 wrapper_checkpoint.txt
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas      7753 Apr 18 11:31 heartbeat.json
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas      4734 Apr 18 11:31 pilotlog.txt
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas    470896 Apr 18 11:31 log.44075483._067956.job.log.1
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas       357 Apr 18 11:31 output.list
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas       620 Apr 18 11:31 runtime_log
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas    849920 Apr 18 11:31 result.tar.gz
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas       658 Apr 18 11:31 ZnpLDmU0xP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmw4eLDm3LTbYo.diag
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 11:31 runtime_log.err
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 11:31 boinc_mmap_file
[2025-04-18 11:31:51] -rw-r--r-- 1 boincer umatlas     21894 Apr 18 11:31 stderr.txt
[2025-04-18 11:31:51] HITS file was successfully produced:
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas 195726015 Apr 18 11:30 shared/HITS.pool.root.1
[2025-04-18 11:31:51]  *** Contents of shared directory: ***
[2025-04-18 11:31:51] total 409424
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas 222126497 Apr 18 10:08 ATLAS.root_0
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 10:08 start_atlas.sh
[2025-04-18 11:31:51] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 10:08 input.tar.gz
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas 195726015 Apr 18 11:30 HITS.pool.root.1
[2025-04-18 11:31:51] -rw------- 1 boincer umatlas    849920 Apr 18 11:31 result.tar.gz
11:31:53 (14487): run_atlas exited; CPU time 46261.926411
11:31:53 (14487): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN