Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:20:37 (1288698): wrapper (7.7.26015): starting
16:20:37 (1288698): wrapper: running run_atlas (--nthreads 2)
[2025-04-18 16:20:38] Arguments: --nthreads 2
[2025-04-18 16:20:38] Threads: 2
[2025-04-18 16:20:38] Checking for CVMFS
[2025-04-18 16:20:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 16:20:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 16:20:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 16:20:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 16:20:51] 2.11.0.0 1288902 0 23960 145005 3 1 3033200 4194304 0 130560 0 0 0.000 1170 426 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-18 16:20:51] CVMFS is ok
[2025-04-18 16:20:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 16:20:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-18 16:20:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-18 16:20:51] Further information can be found at the LHC@home message board.
[2025-04-18 16:20:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 16:20:51] Checking for apptainer binary...
[2025-04-18 16:20:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 16:20:51] Running /usr/bin/apptainer --version
[2025-04-18 16:20:52] apptainer version 1.2.2-1.el8
[2025-04-18 16:20:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 16:20:54] bottom
[2025-04-18 16:20:54] apptainer works
[2025-04-18 16:20:54] Set ATHENA_PROC_NUMBER=2
[2025-04-18 16:20:54] Set ATHENA_CORE_NUMBER=2
[2025-04-18 16:20:54] Starting ATLAS job with PandaID=6603966045
[2025-04-18 16:20:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 16:33:33]  *** The last 200 lines of the pilot log: ***
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | monitor loop #167: job 0:6603966045 is in state 'failed'
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-18 16:33:33] 2025-04-18 14:33:16,973 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/memory_monitor_output.txt
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | INFO     | memory summary dictionary not yet available
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . Timing measurements:
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . get job = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . initial setup = 7 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload setup = 17 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . stage-in = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload execution = 329 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . stage-out = 1 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . log creation = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/pilotlog.txt
[2025-04-18 16:33:33] 2025-04-18 14:33:17,008 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-18 16:33:33] - Log from pilotlog.txt -
[2025-04-18 16:33:33] 2025-04-18 14:33:13,394 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | monitor loop #167: job 0:6603966045 is in state 'failed'
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-18 16:33:33] 2025-04-18 14:33:16,973 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/memory_monitor_output.txt
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | INFO     | memory summary dictionary not yet available
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . Timing measurements:
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . get job = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . initial setup = 7 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload setup = 17 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . stage-in = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload execution = 329 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . stage-out = 1 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . log creation = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/pilotlog.txt
[2025-04-18 16:33:33] 2025-04-18 14:33:17,009 | WARNING  | 
[2025-04-18 16:33:33] [begin log extracts]
[2025-04-18 16:33:33] - Log from pilotlog.txt -
[2025-04-18 16:33:33] 2025-04-18 14:33:13,394 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | monitor loop #167: job 0:6603966045 is in state 'failed'
[2025-04-18 16:33:33] 2025-04-18 14:33:15,897 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-18 16:33:33] 2025-04-18 14:33:16,973 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | WARNING  | file does not exist either: /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/memory_monitor_output.txt
[2025-04-18 16:33:33] 2025-04-18 14:33:16,974 | INFO     | memory summary dictionary not yet available
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 16:33:33] 2025-04-18 14:33:16,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . Timing measurements:
[2025-04-18 16:33:33] 2025-04-18 14:33:16,977 | INFO     | . get job = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . initial setup = 7 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload setup = 17 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . stage-in = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,978 | INFO     | . payload execution = 329 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . stage-out = 1 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | . log creation = 0 s
[2025-04-18 16:33:33] 2025-04-18 14:33:16,979 | INFO     | ..............................
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-18 16:33:33] 2025-04-18 14:33:16,980 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/5/PanDA_Pilot-6603966045/pilotlog.txt
[2025-04-18 16:33:33] [end log extracts]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,010 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-18 16:33:33] 2025-04-18 14:33:17,012 | WARNING  | pilotErrorDiags = ["Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-18 16:33:33] 2025-04-18 14:33:17,258 | INFO     | 
[2025-04-18 16:33:33] 2025-04-18 14:33:17,259 | INFO     | job summary report
[2025-04-18 16:33:33] 2025-04-18 14:33:17,259 | INFO     | --------------------------------------------------
[2025-04-18 16:33:33] 2025-04-18 14:33:17,259 | INFO     | PanDA job id: 6603966045
[2025-04-18 16:33:33] 2025-04-18 14:33:17,260 | INFO     | task id: 44075483
[2025-04-18 16:33:33] 2025-04-18 14:33:17,260 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-18 16:29:48,607 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-18 16:33:33] 2025-04-18 14:33:17,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 16:33:33] 2025-04-18 14:33:17,260 | INFO     | pilot state: failed 
[2025-04-18 16:33:33] 2025-04-18 14:33:17,261 | INFO     | transexitcode: 65
[2025-04-18 16:33:33] 2025-04-18 14:33:17,261 | INFO     | exeerrorcode: 65
[2025-04-18 16:33:33] 2025-04-18 14:33:17,261 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6410.86 KB/s
[2025-04-18 16:33:33] 2025-04-18 14:33:17,262 | INFO     | exitcode: 65
[2025-04-18 16:33:33] 2025-04-18 14:33:17,262 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6410.86 KB/s
[2025-04-18 16:33:33] 2025-04-18 14:33:17,262 | INFO     | cpuconsumptiontime: 266 s
[2025-04-18 16:33:33] 2025-04-18 14:33:17,262 | INFO     | nevents: 0
[2025-04-18 16:33:33] 2025-04-18 14:33:17,263 | INFO     | neventsw: 0
[2025-04-18 16:33:33] 2025-04-18 14:33:17,263 | INFO     | pid: 1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:17,263 | INFO     | pgrp: 1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:17,263 | INFO     | corecount: 2
[2025-04-18 16:33:33] 2025-04-18 14:33:17,264 | INFO     | event service: False
[2025-04-18 16:33:33] 2025-04-18 14:33:17,264 | INFO     | sizes: {0: 2426597, 1: 2426681, 2: 2426880, 11: 2427086, 13: 2427114, 410: 2451268, 412: 2455562, 549: 2455676}
[2025-04-18 16:33:33] 2025-04-18 14:33:17,264 | INFO     | --------------------------------------------------
[2025-04-18 16:33:33] 2025-04-18 14:33:17,264 | INFO     | 
[2025-04-18 16:33:33] 2025-04-18 14:33:17,265 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-04-18 16:33:33] 2025-04-18 14:33:17,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 16:33:33] 2025-04-18 14:33:17,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 16:33:33] 2025-04-18 14:33:17,311 | INFO     | job 6603966045 has completed (purged errors)
[2025-04-18 16:33:33] 2025-04-18 14:33:17,311 | INFO     | overall cleanup function is called
[2025-04-18 16:33:33] 2025-04-18 14:33:18,318 | INFO     | --- collectZombieJob: --- 10, [1299311]
[2025-04-18 16:33:33] 2025-04-18 14:33:18,319 | INFO     | zombie collector waiting for pid 1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:18,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 16:33:33] 2025-04-18 14:33:18,319 | INFO     | collected zombie processes
[2025-04-18 16:33:33] 2025-04-18 14:33:18,320 | INFO     | will attempt to kill all subprocesses of pid=1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:18,470 | INFO     | process IDs to be killed: [1299311] (in reverse order)
[2025-04-18 16:33:33] 2025-04-18 14:33:18,547 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 16:33:33] 2025-04-18 14:33:18,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 16:33:33] 2025-04-18 14:33:18,555 | INFO     | did not find any defunct processes belonging to 1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:18,561 | INFO     | did not find any defunct processes belonging to 1299311
[2025-04-18 16:33:33] 2025-04-18 14:33:18,562 | INFO     | ready for new job
[2025-04-18 16:33:33] 2025-04-18 14:33:18,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 16:33:33] 2025-04-18 14:33:18,565 | INFO     | **************************************
[2025-04-18 16:33:33] 2025-04-18 14:33:18,565 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 16:33:33] 2025-04-18 14:33:18,566 | INFO     | **************************************
[2025-04-18 16:33:33] 2025-04-18 14:33:18,566 | INFO     | 
[2025-04-18 16:33:33] 2025-04-18 14:33:18,578 | INFO     | architecture information:
[2025-04-18 16:33:33] 2025-04-18 14:33:18,579 | INFO     | executing command: cat /etc/os-release
[2025-04-18 16:33:33] 2025-04-18 14:33:18,607 | INFO     | cat /etc/os-release:
[2025-04-18 16:33:33] NAME="CentOS Linux"
[2025-04-18 16:33:33] VERSION="7 (Core)"
[2025-04-18 16:33:33] ID="centos"
[2025-04-18 16:33:33] ID_LIKE="rhel fedora"
[2025-04-18 16:33:33] VERSION_ID="7"
[2025-04-18 16:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 16:33:33] ANSI_COLOR="0;31"
[2025-04-18 16:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 16:33:33] HOME_URL="https://www.centos.org/"
[2025-04-18 16:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 16:33:33] 
[2025-04-18 16:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 16:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 16:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 16:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 16:33:33] 
[2025-04-18 16:33:33] 2025-04-18 14:33:18,607 | INFO     | **************************************
[2025-04-18 16:33:33] 2025-04-18 14:33:19,111 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-04-18 16:33:33] 2025-04-18 14:33:19,140 | INFO     | sufficient remaining disk space (213660991488 B)
[2025-04-18 16:33:33] 2025-04-18 14:33:19,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 16:33:33] 2025-04-18 14:33:19,141 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 16:33:33] 2025-04-18 14:33:19,141 | INFO     | update_server=False
[2025-04-18 16:33:33] 2025-04-18 14:33:19,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 16:33:33] 2025-04-18 14:33:19,142 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 16:33:33] 2025-04-18 14:33:19,143 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 16:33:33] 2025-04-18 14:33:19,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 16:33:33] 2025-04-18 14:33:19,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 16:33:33] 2025-04-18 14:33:19,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:33:33] 2025-04-18 14:33:19,197 | INFO     | all job control threads have been joined
[2025-04-18 16:33:33] 2025-04-18 14:33:19,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:33:33] 2025-04-18 14:33:19,406 | INFO     | aborting loop
[2025-04-18 16:33:33] 2025-04-18 14:33:19,428 | INFO     | all payload control threads have been joined
[2025-04-18 16:33:33] 2025-04-18 14:33:19,512 | INFO     | all data control threads have been joined
[2025-04-18 16:33:33] 2025-04-18 14:33:20,147 | INFO     | [job] retrieve thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,150 | INFO     | [job] queue monitor thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,203 | INFO     | [job] control thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,412 | INFO     | [job] job monitor thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,434 | INFO     | [payload] control thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,488 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,518 | INFO     | [data] control thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,528 | INFO     | [payload] failed_post thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 16:33:33] 2025-04-18 14:33:20,825 | INFO     | [payload] validate_post thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,905 | INFO     | [job] validate thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:20,925 | INFO     | [data] copytool_in thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:21,055 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:21,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 16:33:33] 2025-04-18 14:33:21,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:21,548 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:22,560 | INFO     | [data] copytool_out thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:25,545 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 16:33:33] 2025-04-18 14:33:27,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364705593152)>', '<ExcThread(monitor, started 140363884914432)>']
[2025-04-18 16:33:33] 2025-04-18 14:33:28,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 16:33:33] 2025-04-18 14:33:28,183 | INFO     | [monitor] control thread has ended
[2025-04-18 16:33:33] 2025-04-18 14:33:32,639 | INFO     | all workflow threads have been joined
[2025-04-18 16:33:33] 2025-04-18 14:33:32,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 16:33:33] 2025-04-18 14:33:32,640 | INFO     | traces error code: 0
[2025-04-18 16:33:33] 2025-04-18 14:33:32,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 16:33:33] 2025-04-18 14:33:32,940 [wrapper] ==== pilot stdout END ====
[2025-04-18 16:33:33] 2025-04-18 14:33:32,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 16:33:33] 2025-04-18 14:33:32,953 [wrapper] pilotpid: 1292933
[2025-04-18 16:33:33] 2025-04-18 14:33:32,958 [wrapper] Pilot exit status: 0
[2025-04-18 16:33:33] 2025-04-18 14:33:33,050 [wrapper] pandaids: 6603966045
[2025-04-18 16:33:33] 2025-04-18 14:33:33,095 [wrapper] cleanup supervisor_pilot 1292939 1292934
[2025-04-18 16:33:33] 2025-04-18 14:33:33,103 [wrapper] Test setup, not cleaning
[2025-04-18 16:33:33] 2025-04-18 14:33:33,109 [wrapper] apfmon messages muted
[2025-04-18 16:33:33] 2025-04-18 14:33:33,115 [wrapper] ==== wrapper stdout END ====
[2025-04-18 16:33:33] 2025-04-18 14:33:33,120 [wrapper] ==== wrapper stderr END ====
[2025-04-18 16:33:33]  *** Error codes and diagnostics ***
[2025-04-18 16:33:33]     "exeErrorCode": 65,
[2025-04-18 16:33:33]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6410.86 KB/s",
[2025-04-18 16:33:33]     "pilotErrorCode": 1305,
[2025-04-18 16:33:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6410.86 KB/s",
[2025-04-18 16:33:33]  *** Listing of results directory ***
[2025-04-18 16:33:33] total 221808
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc    495897 Apr 16 13:50 pilot3.tar.gz
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc      5111 Apr 16 13:56 queuedata.json
[2025-04-18 16:33:33] -rwx------ 1 boinc boinc     37140 Apr 16 13:57 runpilot2-wrapper.sh
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc       100 Apr 18 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 16:33:33] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 16:20 run_atlas
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc       105 Apr 18 16:20 job.xml
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc 222812130 Apr 18 16:20 EVNT.44075481._001572.pool.root.1
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc      6037 Apr 18 16:20 init_data.xml
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc    508894 Apr 18 16:20 input.tar.gz
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc     17569 Apr 18 16:20 start_atlas.sh
[2025-04-18 16:33:33] drwxrwx--x 2 boinc boinc        68 Apr 18 16:20 shared
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc         0 Apr 18 16:20 boinc_lockfile
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc      2579 Apr 18 16:20 pandaJob.out
[2025-04-18 16:33:33] -rw------- 1 boinc boinc       424 Apr 18 16:20 setup.sh.local
[2025-04-18 16:33:33] -rw------- 1 boinc boinc    990604 Apr 18 16:23 agis_schedconf.cvmfs.json
[2025-04-18 16:33:33] -rw------- 1 boinc boinc   1618536 Apr 18 16:23 agis_ddmendpoints.agis.ALL.json
[2025-04-18 16:33:33] drwx------ 4 boinc boinc       334 Apr 18 16:23 pilot3
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc       525 Apr 18 16:29 boinc_task_state.xml
[2025-04-18 16:33:33] -rw------- 1 boinc boinc     49810 Apr 18 16:30 log.44075483._040136.job.log.tgz.1
[2025-04-18 16:33:33] -rw------- 1 boinc boinc        95 Apr 18 16:32 pilot_heartbeat.json
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc      8192 Apr 18 16:33 boinc_mmap_file
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc        24 Apr 18 16:33 wrapper_checkpoint.txt
[2025-04-18 16:33:33] -rw------- 1 boinc boinc      8257 Apr 18 16:33 heartbeat.json
[2025-04-18 16:33:33] -rw------- 1 boinc boinc      4477 Apr 18 16:33 pilotlog.txt
[2025-04-18 16:33:33] -rw------- 1 boinc boinc    188048 Apr 18 16:33 log.44075483._040136.job.log.1
[2025-04-18 16:33:33] -rw------- 1 boinc boinc       188 Apr 18 16:33 output.list
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc       620 Apr 18 16:33 runtime_log
[2025-04-18 16:33:33] -rw------- 1 boinc boinc    256000 Apr 18 16:33 result.tar.gz
[2025-04-18 16:33:33] -rw------- 1 boinc boinc       640 Apr 18 16:33 5BEODmaZGP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmcHaLDmaUnAsn.diag
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc     10815 Apr 18 16:33 runtime_log.err
[2025-04-18 16:33:33] -rw-r--r-- 1 boinc boinc     22042 Apr 18 16:33 stderr.txt
[2025-04-18 16:33:33] No HITS result produced
[2025-04-18 16:33:33]  *** Contents of shared directory: ***
[2025-04-18 16:33:33] total 218364
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc 222812130 Apr 18 16:20 ATLAS.root_0
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc    508894 Apr 18 16:20 input.tar.gz
[2025-04-18 16:33:33] -rw-r--r-- 2 boinc boinc     17569 Apr 18 16:20 start_atlas.sh
[2025-04-18 16:33:33] -rw------- 1 boinc boinc    256000 Apr 18 16:33 result.tar.gz
16:33:34 (1288698): run_atlas exited; CPU time 250.709162
16:33:34 (1288698): called boinc_finish(0)

</stderr_txt>
]]>

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