Stderr output

<core_client_version>8.2.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 16:09:36 (40712): Detected: vboxwrapper 26206
2025-04-18 16:09:36 (40712): Detected: BOINC client v8.2.0
2025-04-18 16:09:36 (40712): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-18 16:09:37 (40712): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 16:09:37 (40712): Create VM. (boinc_ff7c3e51ebe8e9fb, slot#27)
2025-04-18 16:09:38 (40712): Setting Memory Size for VM. (4096MB)
2025-04-18 16:09:38 (40712): Setting CPU Count for VM. (1)
2025-04-18 16:09:38 (40712): Setting Chipset Options for VM.
2025-04-18 16:09:39 (40712): Setting Graphics Controller Options for VM.
2025-04-18 16:09:39 (40712): Setting Boot Options for VM.
2025-04-18 16:09:39 (40712): Setting Network Configuration for NAT.
2025-04-18 16:09:39 (40712): Enabling VM Network Access.
2025-04-18 16:09:40 (40712): Disabling USB Support for VM.
2025-04-18 16:09:40 (40712): Disabling COM Port Support for VM.
2025-04-18 16:09:40 (40712): Disabling LPT Port Support for VM.
2025-04-18 16:09:40 (40712): Disabling Audio Support for VM.
2025-04-18 16:09:41 (40712): Disabling Clipboard Support for VM.
2025-04-18 16:09:41 (40712): Disabling Drag and Drop Support for VM.
2025-04-18 16:09:41 (40712): Adding storage controller(s) to VM.
2025-04-18 16:09:41 (40712): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 16:09:42 (40712): Adding VirtualBox Guest Additions to VM.
2025-04-18 16:09:42 (40712): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 16:09:42 (40712): forwarding host port 64239 to guest port 80
2025-04-18 16:09:43 (40712): Enabling remote desktop for VM.
2025-04-18 16:09:43 (40712): Required extension pack not installed, remote desktop not enabled.
2025-04-18 16:09:43 (40712): Enabling shared directory for VM.
2025-04-18 16:09:43 (40712): Starting VM using VBoxManage interface. (boinc_ff7c3e51ebe8e9fb, slot#27)
2025-04-18 16:09:48 (40712): Successfully started VM. (PID = '43740')
2025-04-18 16:09:48 (40712): Reporting VM Process ID to BOINC.
2025-04-18 16:09:48 (40712): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-18 16:09:48 (40712): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 16:09:48 (40712): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 16:09:48 (40712): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 16:09:48 (40712): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 16:09:48 (40712): Detected: Web Application Enabled (http://localhost:64239)
2025-04-18 16:09:48 (40712): Preference change detected
2025-04-18 16:09:48 (40712): Setting CPU throttle for VM. (100%)
2025-04-18 16:09:48 (40712): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 16:09:50 (40712): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 16:09:50 (40712): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 16:09:52 (40712): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 16:09:52 (40712): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 16:09:52 (40712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 16:09:55 (40712): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 16:09:55 (40712): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 16:10:00 (40712): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000218 main     Log opened 2025-04-18T16:09:58.751164000Z
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000322 main     OS Product: Linux
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000341 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000354 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000368 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000369 main     Process ID: 1242
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.000369 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 16:10:00 (40712): Guest Log: 00:00:00.001687 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 16:10:00 (40712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 16:10:00 (40712): Guest Log: [INFO] Mounting shared directory
2025-04-18 16:10:00 (40712): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 16:10:03 (40712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 16:10:03 (40712): Guest Log: [INFO] Detected branch: prod
2025-04-18 16:10:03 (40712): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 16:10:03 (40712): Guest Log: Copying input files
2025-04-18 16:10:04 (40712): Guest Log: Copied input files into RunAtlas.
2025-04-18 16:10:04 (40712): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-18 16:10:10 (40712): Guest Log: 00:00:10.014597 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 675 421 000ns (GuestNow=1 744 985 410 090 048 000 ns GuestLast=1 744 992 598 765 469 000 ns fSetTimeLastLoop=true )
2025-04-18 16:10:10 (40712): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 16:10:10 (40712): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 16:10:10 (40712): Guest Log: 2.6.3.0 1511 0 31800 145004 4 1 3119946 4096000 0 65024 0 0 n/a 1170 18000 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-18 16:10:11 (40712): Guest Log: copied the webapp to /var/www
2025-04-18 16:10:11 (40712): Guest Log: core_number=1
2025-04-18 16:10:11 (40712): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 16:10:11 (40712): Guest Log:  *** Starting ATLAS job. (PandaID=6606057002 taskID=44075483) ***
2025-04-18 17:49:51 (40712): Status Report: Elapsed Time: '6000.000000'
2025-04-18 17:49:51 (40712): Status Report: CPU Time: '5792.640625'
2025-04-18 19:29:53 (40712): Status Report: Elapsed Time: '12000.000000'
2025-04-18 19:29:53 (40712): Status Report: CPU Time: '11767.703125'
2025-04-18 21:09:56 (40712): Status Report: Elapsed Time: '18000.000000'
2025-04-18 21:09:56 (40712): Status Report: CPU Time: '17743.281250'
2025-04-18 22:49:58 (40712): Status Report: Elapsed Time: '24000.000000'
2025-04-18 22:49:58 (40712): Status Report: CPU Time: '23717.750000'
2025-04-18 23:34:23 (40712): Guest Log:  *** Job finished ***
2025-04-18 23:34:23 (40712): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:33:59,653 | INFO     | [data] queue_monitor thread has finished
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:05,730 | INFO     | job.realtimelogging is not enabled
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:06,731 | INFO     | [payload] run_realtimelog thread has finished
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:07,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646718863168)>', '<ExcThread(monitor, started 140646136403712)>']
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:08,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:08,411 | INFO     | [monitor] control thread has ended
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,628 | INFO     | all workflow threads have been joined
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,628 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,628 | INFO     | traces error code: 0
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,716 [wrapper] ==== pilot stdout END ====
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,718 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,719 [wrapper] pilotpid: 5776
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,720 [wrapper] Pilot exit status: 0
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,733 [wrapper] pandaids: 6606057002
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,748 [wrapper] cleanup supervisor_pilot  2234 5777
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,749 [wrapper] Test setup, not cleaning
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,751 [wrapper] apfmon messages muted
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,752 [wrapper] ==== wrapper stdout END ====
2025-04-18 23:34:23 (40712): Guest Log: 2025-04-18 21:34:12,754 [wrapper] ==== wrapper stderr END ====
2025-04-18 23:34:23 (40712): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 23:34:23 (40712): Guest Log:     "exeErrorCode": 0,
2025-04-18 23:34:23 (40712): Guest Log:     "exeErrorDiag": "",
2025-04-18 23:34:23 (40712): Guest Log:     "pilotErrorCode": 0,
2025-04-18 23:34:23 (40712): Guest Log:     "pilotErrorDiag": "",
2025-04-18 23:34:23 (40712): Guest Log:  *** Listing of results directory ***
2025-04-18 23:34:23 (40712): Guest Log: total 203856
2025-04-18 23:34:23 (40712): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 18 02:48 queuedata.json
2025-04-18 23:34:23 (40712): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 18 02:49 pilot3.tar.gz
2025-04-18 23:34:23 (40712): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 18 02:51 runpilot2-wrapper.sh
2025-04-18 23:34:23 (40712): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Apr 18 14:10 init_data.xml
2025-04-18 23:34:23 (40712): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 18 14:10 input.tar.gz
2025-04-18 23:34:23 (40712): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 14:10 start_atlas.sh
2025-04-18 23:34:23 (40712): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 14:10 EVNT.44075481._002464.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 23:34:23 (40712): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 18 14:10 pandaJob.out
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas       460 Apr 18 14:10 setup.sh.local
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas    990604 Apr 18 14:10 agis_schedconf.cvmfs.json
2025-04-18 23:34:23 (40712): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 14:10 pilot3
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas 199424889 Apr 18 21:33 HITS.44075483._063385.pool.root.1
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 21:33 pilot_heartbeat.json
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 18 21:33 memory_monitor_summary.json
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 21:33 agis_ddmendpoints.agis.ALL.json
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas    398016 Apr 18 21:33 log.44075483._063385.job.log.tgz.1
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas      7675 Apr 18 21:33 heartbeat.json
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 18 21:34 pilotlog.txt
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas   2365648 Apr 18 21:34 log.44075483._063385.job.log.1
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 21:34 output.list
2025-04-18 23:34:23 (40712): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 21:34 runtime_log
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas   2785280 Apr 18 21:34 result.tar.gz
2025-04-18 23:34:23 (40712): Guest Log: -rw-r--r--. 1 atlas atlas     11174 Apr 18 21:34 runtime_log.err
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas       657 Apr 18 21:34 OofLDmzzqP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmRe4KDmSkpejm.diag
2025-04-18 23:34:23 (40712): Guest Log: Looking for outputfile HITS.44075483._063385.pool.root.1
2025-04-18 23:34:23 (40712): Guest Log: HITS file was successfully produced
2025-04-18 23:34:23 (40712): Guest Log: -rw-------. 1 atlas atlas 199424889 Apr 18 21:33 /home/atlas/RunAtlas/HITS.44075483._063385.pool.root.1
2025-04-18 23:34:24 (40712): Guest Log: Successfully finished the ATLAS job!
2025-04-18 23:34:24 (40712): Guest Log: Copying the results back to the shared directory!
2025-04-18 23:34:24 (40712): Guest Log:  *** Contents of shared directory: ***
2025-04-18 23:34:24 (40712): Guest Log: total 418016
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root 225289006 Apr 18 14:09 ATLAS.root_0
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root 199424889 Apr 18  2025 HITS.pool.root.1
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root      9354 Apr 18 14:09 init_data.xml
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 18 14:09 input.tar.gz
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root   2785280 Apr 18  2025 result.tar.gz
2025-04-18 23:34:24 (40712): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 14:09 start_atlas.sh
2025-04-18 23:34:24 (40712): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 23:34:24 (40712): VM Completion File Detected.
2025-04-18 23:34:24 (40712): Powering off VM.
2025-04-18 23:34:25 (40712): Successfully stopped VM.
2025-04-18 23:34:25 (40712): Deregistering VM. (boinc_ff7c3e51ebe8e9fb, slot#27)
2025-04-18 23:34:25 (40712): Removing network bandwidth throttle group from VM.
2025-04-18 23:34:25 (40712): Removing VM from VirtualBox.
23:34:30 (40712): called boinc_finish(0)

</stderr_txt>
]]>

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