Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:48 (1055): wrapper (7.7.26015): starting
09:17:48 (1055): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 09:17:48] Arguments: --nthreads 12
[2025-04-18 09:17:48] Threads: 12
[2025-04-18 09:17:48] Checking for CVMFS
[2025-04-18 09:17:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 09:17:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 09:17:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 09:17:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 09:17:49] 2.11.2.0 24478 215703 112552 145003 3 193 10687981 18432000 2652 130560 0 20820167 99.073 52669928 32440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 09:17:49] CVMFS is ok
[2025-04-18 09:17:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 09:17:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 09:17:49] Further information can be found at the LHC@home message board.
[2025-04-18 09:17:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 09:17:49] Checking for apptainer binary...
[2025-04-18 09:17:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 09:17:49] Running /usr/bin/apptainer --version
[2025-04-18 09:17:50] apptainer version 1.3.2-1.el7
[2025-04-18 09:17:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 09:17:52] c-206-10.aglt2.org
[2025-04-18 09:17:52] apptainer works
[2025-04-18 09:17:52] Set ATHENA_PROC_NUMBER=12
[2025-04-18 09:17:52] Set ATHENA_CORE_NUMBER=12
[2025-04-18 09:17:52] Starting ATLAS job with PandaID=6606295377
[2025-04-18 09:17:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 18:26:49]  *** The last 200 lines of the pilot log: ***
[2025-04-18 18:26:49] 2025-04-18 22:26:32,423 | INFO     | mean y: 2617794.9202226344
[2025-04-18 18:26:49] 2025-04-18 22:26:32,423 | INFO     | -- intersect: -7898096656.176022
[2025-04-18 18:26:49] 2025-04-18 22:26:32,423 | INFO     | intersect: -7898096656.176022
[2025-04-18 18:26:49] 2025-04-18 22:26:32,424 | INFO     | chi2: 6.727163435287066
[2025-04-18 18:26:49] 2025-04-18 22:26:32,425 | INFO     | sum of square deviations: 47213597460.840775
[2025-04-18 18:26:49] 2025-04-18 22:26:32,434 | INFO     | sum of deviations: 296201200587.36383
[2025-04-18 18:26:49] 2025-04-18 22:26:32,434 | INFO     | mean x: 1744998570.7059925
[2025-04-18 18:26:49] 2025-04-18 22:26:32,434 | INFO     | mean y: 2626444.8239700375
[2025-04-18 18:26:49] 2025-04-18 22:26:32,434 | INFO     | -- intersect: -10944869604.275959
[2025-04-18 18:26:49] 2025-04-18 22:26:32,434 | INFO     | intersect: -10944869604.275959
[2025-04-18 18:26:49] 2025-04-18 22:26:32,435 | INFO     | chi2: 5.073790451724112
[2025-04-18 18:26:49] 2025-04-18 22:26:32,436 | INFO     | current chi2=5.073790451724112 (change=24.577565261611632 %)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,436 | INFO     | right removable region: 533
[2025-04-18 18:26:49] 2025-04-18 22:26:32,437 | INFO     | sum of square deviations: 47213204620.84076
[2025-04-18 18:26:49] 2025-04-18 22:26:32,445 | INFO     | sum of deviations: 68201900771.679665
[2025-04-18 18:26:49] 2025-04-18 22:26:32,446 | INFO     | mean x: 1744998875.7059925
[2025-04-18 18:26:49] 2025-04-18 22:26:32,446 | INFO     | mean y: 2635047.4438202246
[2025-04-18 18:26:49] 2025-04-18 22:26:32,446 | INFO     | -- intersect: -2518105519.1700068
[2025-04-18 18:26:49] 2025-04-18 22:26:32,446 | INFO     | intersect: -2518105519.1700068
[2025-04-18 18:26:49] 2025-04-18 22:26:32,447 | INFO     | chi2: 4.0132690695613205
[2025-04-18 18:26:49] 2025-04-18 22:26:32,447 | INFO     | current chi2=4.0132690695613205 (change=40.34232840977404 %)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,448 | INFO     | sum of square deviations: 45899057976.00006
[2025-04-18 18:26:49] 2025-04-18 22:26:32,457 | INFO     | sum of deviations: -43764352238.13047
[2025-04-18 18:26:49] 2025-04-18 22:26:32,457 | INFO     | mean x: 1744999028.2173913
[2025-04-18 18:26:49] 2025-04-18 22:26:32,458 | INFO     | mean y: 2648041.3837429113
[2025-04-18 18:26:49] 2025-04-18 22:26:32,458 | INFO     | -- intersect: 1666489424.9265897
[2025-04-18 18:26:49] 2025-04-18 22:26:32,458 | INFO     | intersect: 1666489424.9265897
[2025-04-18 18:26:49] 2025-04-18 22:26:32,459 | INFO     | chi2: 2.6212602257835393
[2025-04-18 18:26:49] 2025-04-18 22:26:32,459 | INFO     | current chi2=2.6212602257835393 (change=34.68516114046492 %)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,460 | INFO     | sum of square deviations: 44609516443.51923
[2025-04-18 18:26:49] 2025-04-18 22:26:32,468 | INFO     | sum of deviations: -115169377041.91222
[2025-04-18 18:26:49] 2025-04-18 22:26:32,468 | INFO     | mean x: 1744999180.7290077
[2025-04-18 18:26:49] 2025-04-18 22:26:32,469 | INFO     | mean y: 2656467.3034351147
[2025-04-18 18:26:49] 2025-04-18 22:26:32,469 | INFO     | -- intersect: 4507759517.1797695
[2025-04-18 18:26:49] 2025-04-18 22:26:32,469 | INFO     | intersect: 4507759517.1797695
[2025-04-18 18:26:49] 2025-04-18 22:26:32,470 | INFO     | chi2: 1.933514703264989
[2025-04-18 18:26:49] 2025-04-18 22:26:32,470 | INFO     | current chi2=1.933514703264989 (change=26.23720894833978 %)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,471 | INFO     | sum of square deviations: 43344347460.89394
[2025-04-18 18:26:49] 2025-04-18 22:26:32,479 | INFO     | sum of deviations: -121031901825.4065
[2025-04-18 18:26:49] 2025-04-18 22:26:32,480 | INFO     | mean x: 1744999333.2408478
[2025-04-18 18:26:49] 2025-04-18 22:26:32,480 | INFO     | mean y: 2657164.6512524085
[2025-04-18 18:26:49] 2025-04-18 22:26:32,480 | INFO     | -- intersect: 4875278402.674391
[2025-04-18 18:26:49] 2025-04-18 22:26:32,480 | INFO     | intersect: 4875278402.674391
[2025-04-18 18:26:49] 2025-04-18 22:26:32,481 | INFO     | chi2: 1.8974499299521979
[2025-04-18 18:26:49] 2025-04-18 22:26:32,481 | INFO     | current chi2=1.8974499299521979 (change=1.865244326918808 %)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,482 | INFO     | left removable region: 40
[2025-04-18 18:26:49] 2025-04-18 22:26:32,482 | INFO     | sum of square deviations: 37149828284.75045
[2025-04-18 18:26:49] 2025-04-18 22:26:32,490 | INFO     | sum of deviations: 28792175509.96754
[2025-04-18 18:26:49] 2025-04-18 22:26:32,491 | INFO     | mean x: 1744999760.306288
[2025-04-18 18:26:49] 2025-04-18 22:26:32,491 | INFO     | mean y: 2657048.3975659227
[2025-04-18 18:26:49] 2025-04-18 22:26:32,491 | INFO     | -- intersect: -1349767489.8395007
[2025-04-18 18:26:49] 2025-04-18 22:26:32,491 | INFO     | intersect: -1349767489.8395007
[2025-04-18 18:26:49] 2025-04-18 22:26:32,492 | INFO     | chi2: 0.034206642726314275
[2025-04-18 18:26:49] 2025-04-18 22:26:32,492 | INFO     | -- intersect: -1349767489.8395007
[2025-04-18 18:26:49] 2025-04-18 22:26:32,492 | INFO     | current memory leak: 0.78 B/s (using 493 data points, chi2=0.03)
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | ..............................
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . Timing measurements:
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . get job = 0 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . initial setup = 3 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . payload setup = 6 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . stage-in = 0 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,494 | INFO     | . payload execution = 32866 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,495 | INFO     | . stage-out = 3 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,495 | INFO     | . log creation = 0 s
[2025-04-18 18:26:49] 2025-04-18 22:26:32,495 | INFO     | ..............................
[2025-04-18 18:26:49] 2025-04-18 22:26:33,331 | INFO     | 
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | job summary report
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | --------------------------------------------------
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | PanDA job id: 6606295377
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | task id: 44075483
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | errors: (none)
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | pilot state: finished 
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | transexitcode: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:33,332 | INFO     | exeerrorcode: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | exeerrordiag: 
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | exitcode: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | exitmsg: OK
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | cpuconsumptiontime: 82445 s
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | nevents: 400
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | neventsw: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | pid: 11376
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | pgrp: 11376
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | corecount: 12
[2025-04-18 18:26:49] 2025-04-18 22:26:33,333 | INFO     | event service: False
[2025-04-18 18:26:49] 2025-04-18 22:26:33,334 | INFO     | sizes: {0: 2425945, 1: 2426801, 5: 2427007, 12: 2427063, 32878: 2464960, 32882: 2473901, 32885: 2474085, 32891: 2474255}
[2025-04-18 18:26:49] 2025-04-18 22:26:33,334 | INFO     | --------------------------------------------------
[2025-04-18 18:26:49] 2025-04-18 22:26:33,334 | INFO     | 
[2025-04-18 18:26:49] 2025-04-18 22:26:33,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 18:26:49] 2025-04-18 22:26:33,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 18:26:49] 2025-04-18 22:26:33,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 18:26:49] 2025-04-18 22:26:33,385 | INFO     | job 6606295377 has completed (purged errors)
[2025-04-18 18:26:49] 2025-04-18 22:26:33,386 | INFO     | overall cleanup function is called
[2025-04-18 18:26:49] 2025-04-18 22:26:34,372 | INFO     | PID=4894 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 18:26:49] 2025-04-18 22:26:34,372 | INFO     | .. there are 4 such processes running
[2025-04-18 18:26:49] 2025-04-18 22:26:34,402 | INFO     | --- collectZombieJob: --- 10, [11376]
[2025-04-18 18:26:49] 2025-04-18 22:26:34,403 | INFO     | zombie collector waiting for pid 11376
[2025-04-18 18:26:49] 2025-04-18 22:26:34,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 18:26:49] 2025-04-18 22:26:34,403 | INFO     | collected zombie processes
[2025-04-18 18:26:49] 2025-04-18 22:26:34,403 | INFO     | will attempt to kill all subprocesses of pid=11376
[2025-04-18 18:26:49] 2025-04-18 22:26:34,583 | INFO     | process IDs to be killed: [11376] (in reverse order)
[2025-04-18 18:26:49] 2025-04-18 22:26:34,630 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 18:26:49] 2025-04-18 22:26:34,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 18:26:49] 2025-04-18 22:26:34,635 | INFO     | did not find any defunct processes belonging to 11376
[2025-04-18 18:26:49] 2025-04-18 22:26:34,640 | INFO     | did not find any defunct processes belonging to 11376
[2025-04-18 18:26:49] 2025-04-18 22:26:34,640 | INFO     | ready for new job
[2025-04-18 18:26:49] 2025-04-18 22:26:34,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 18:26:49] 2025-04-18 22:26:34,642 | INFO     | **************************************
[2025-04-18 18:26:49] 2025-04-18 22:26:34,643 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 18:26:49] 2025-04-18 22:26:34,643 | INFO     | **************************************
[2025-04-18 18:26:49] 2025-04-18 22:26:34,643 | INFO     | 
[2025-04-18 18:26:49] 2025-04-18 22:26:34,644 | INFO     | architecture information:
[2025-04-18 18:26:49] 2025-04-18 22:26:34,645 | INFO     | executing command: cat /etc/os-release
[2025-04-18 18:26:49] 2025-04-18 22:26:34,676 | INFO     | cat /etc/os-release:
[2025-04-18 18:26:49] NAME="CentOS Linux"
[2025-04-18 18:26:49] VERSION="7 (Core)"
[2025-04-18 18:26:49] ID="centos"
[2025-04-18 18:26:49] ID_LIKE="rhel fedora"
[2025-04-18 18:26:49] VERSION_ID="7"
[2025-04-18 18:26:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 18:26:49] ANSI_COLOR="0;31"
[2025-04-18 18:26:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 18:26:49] HOME_URL="https://www.centos.org/"
[2025-04-18 18:26:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 18:26:49] 
[2025-04-18 18:26:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 18:26:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 18:26:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 18:26:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 18:26:49] 
[2025-04-18 18:26:49] 2025-04-18 22:26:34,677 | INFO     | **************************************
[2025-04-18 18:26:49] 2025-04-18 22:26:35,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 18:26:49] 2025-04-18 22:26:35,190 | INFO     | sufficient remaining disk space (29222764544 B)
[2025-04-18 18:26:49] 2025-04-18 22:26:35,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 18:26:49] 2025-04-18 22:26:35,190 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 18:26:49] 2025-04-18 22:26:35,190 | INFO     | update_server=False
[2025-04-18 18:26:49] 2025-04-18 22:26:35,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 18:26:49] 2025-04-18 22:26:35,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 18:26:49] 2025-04-18 22:26:35,191 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 18:26:49] 2025-04-18 22:26:35,191 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 18:26:49] 2025-04-18 22:26:35,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 18:26:49] 2025-04-18 22:26:35,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 18:26:49] 2025-04-18 22:26:35,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:26:49] 2025-04-18 22:26:35,341 | INFO     | aborting loop
[2025-04-18 18:26:49] 2025-04-18 22:26:36,199 | INFO     | [job] retrieve thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:36,298 | INFO     | all data control threads have been joined
[2025-04-18 18:26:49] 2025-04-18 22:26:36,347 | INFO     | [job] job monitor thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:36,364 | INFO     | all job control threads have been joined
[2025-04-18 18:26:49] 2025-04-18 22:26:36,508 | INFO     | all payload control threads have been joined
[2025-04-18 18:26:49] 2025-04-18 22:26:36,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:36,709 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:36,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 18:26:49] 2025-04-18 22:26:36,982 | INFO     | [payload] validate_post thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,199 | INFO     | [data] copytool_out thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,303 | INFO     | [payload] failed_post thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,304 | INFO     | [data] control thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,365 | INFO     | [job] control thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,514 | INFO     | [payload] control thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,515 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,524 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,524 | INFO     | [data] copytool_in thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,524 | INFO     | [job] validate thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:37,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:26:49] 2025-04-18 22:26:38,893 | INFO     | [job] queue monitor thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:40,972 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 18:26:49] 2025-04-18 22:26:41,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978401822528)>', '<ExcThread(monitor, started 139977715332864)>']
[2025-04-18 18:26:49] 2025-04-18 22:26:42,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 18:26:49] 2025-04-18 22:26:42,235 | INFO     | [monitor] control thread has ended
[2025-04-18 18:26:49] 2025-04-18 22:26:46,895 | INFO     | all workflow threads have been joined
[2025-04-18 18:26:49] 2025-04-18 22:26:46,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 18:26:49] 2025-04-18 22:26:47,066 | INFO     | traces error code: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:47,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 18:26:49] 2025-04-18 22:26:47,809 [wrapper] ==== pilot stdout END ====
[2025-04-18 18:26:49] 2025-04-18 22:26:47,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 18:26:49] 2025-04-18 22:26:47,818 [wrapper] pilotpid: 4894
[2025-04-18 18:26:49] 2025-04-18 22:26:47,820 [wrapper] Pilot exit status: 0
[2025-04-18 18:26:49] 2025-04-18 22:26:47,936 [wrapper] pandaids: 6606295377
[2025-04-18 18:26:49] 2025-04-18 22:26:48,035 [wrapper] cleanup supervisor_pilot 11794 4895
[2025-04-18 18:26:49] 2025-04-18 22:26:48,047 [wrapper] Test setup, not cleaning
[2025-04-18 18:26:49] 2025-04-18 22:26:48,049 [wrapper] apfmon messages muted
[2025-04-18 18:26:49] 2025-04-18 22:26:48,051 [wrapper] ==== wrapper stdout END ====
[2025-04-18 18:26:49] 2025-04-18 22:26:48,053 [wrapper] ==== wrapper stderr END ====
[2025-04-18 18:26:49]  *** Error codes and diagnostics ***
[2025-04-18 18:26:49]     "exeErrorCode": 0,
[2025-04-18 18:26:49]     "exeErrorDiag": "",
[2025-04-18 18:26:49]     "pilotErrorCode": 0,
[2025-04-18 18:26:49]     "pilotErrorDiag": "",
[2025-04-18 18:26:49]  *** Listing of results directory ***
[2025-04-18 18:26:49] total 411020
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 05:49 pilot3.tar.gz
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 06:02 queuedata.json
[2025-04-18 18:26:49] -rwx------ 1 boincer umatlas     37140 Apr 18 06:02 runpilot2-wrapper.sh
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas       100 Apr 18 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 18:26:49] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 09:17 run_atlas
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas       105 Apr 18 09:17 job.xml
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas 222208388 Apr 18 09:17 EVNT.44075481._002636.pool.root.1
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:17 start_atlas.sh
[2025-04-18 18:26:49] drwxrwx--x 2 boincer umatlas      4096 Apr 18 09:17 shared
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 09:17 input.tar.gz
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas         0 Apr 18 09:17 boinc_lockfile
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 09:17 pandaJob.out
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas       424 Apr 18 09:17 setup.sh.local
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas    990604 Apr 18 09:18 agis_schedconf.cvmfs.json
[2025-04-18 18:26:49] drwx------ 4 boincer umatlas      4096 Apr 18 09:18 pilot3
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas      5866 Apr 18 18:21 init_data.xml
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas 188560554 Apr 18 18:23 HITS.44075483._067824.pool.root.1
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas       531 Apr 18 18:24 boinc_task_state.xml
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas        95 Apr 18 18:26 pilot_heartbeat.json
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas      1071 Apr 18 18:26 memory_monitor_summary.json
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas   1618536 Apr 18 18:26 agis_ddmendpoints.agis.ALL.json
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas    620204 Apr 18 18:26 log.44075483._067824.job.log.tgz.1
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas      7791 Apr 18 18:26 heartbeat.json
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas      4476 Apr 18 18:26 pilotlog.txt
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 18:26 boinc_mmap_file
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas        28 Apr 18 18:26 wrapper_checkpoint.txt
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas   2501790 Apr 18 18:26 log.44075483._067824.job.log.1
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas       357 Apr 18 18:26 output.list
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas       620 Apr 18 18:26 runtime_log
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas   3143680 Apr 18 18:26 result.tar.gz
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas     11016 Apr 18 18:26 runtime_log.err
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas       663 Apr 18 18:26 n6fMDmZjxP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDme14KDmPY1AQm.diag
[2025-04-18 18:26:49] -rw-r--r-- 1 boincer umatlas     20966 Apr 18 18:26 stderr.txt
[2025-04-18 18:26:49] HITS file was successfully produced:
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas 188560554 Apr 18 18:23 shared/HITS.pool.root.1
[2025-04-18 18:26:49]  *** Contents of shared directory: ***
[2025-04-18 18:26:49] total 404748
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas 222208388 Apr 18 09:17 ATLAS.root_0
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:17 start_atlas.sh
[2025-04-18 18:26:49] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 09:17 input.tar.gz
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas 188560554 Apr 18 18:23 HITS.pool.root.1
[2025-04-18 18:26:49] -rw------- 1 boincer umatlas   3143680 Apr 18 18:26 result.tar.gz
18:26:50 (1055): run_atlas exited; CPU time 82826.289162
18:26:50 (1055): called boinc_finish(0)

</stderr_txt>
]]>

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