Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:22:52 (26084): wrapper (7.7.26015): starting
09:22:52 (26084): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 09:22:52] Arguments: --nthreads 12
[2025-04-18 09:22:52] Threads: 12
[2025-04-18 09:22:52] Checking for CVMFS
[2025-04-18 09:22:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 09:22:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 09:22:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 09:22:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 09:22:52] 2.11.2.0 3078 57295 146860 145003 1 56 18411294 20275201 1 130560 0 24393445 99.985 7060781 58388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 09:22:52] CVMFS is ok
[2025-04-18 09:22:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 09:22:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 09:22:52] Further information can be found at the LHC@home message board.
[2025-04-18 09:22:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 09:22:52] Checking for apptainer binary...
[2025-04-18 09:22:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 09:22:52] Running /usr/bin/apptainer --version
[2025-04-18 09:22:52] apptainer version 1.3.2-1.el7
[2025-04-18 09:22:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 09:22:54] c-115-41.aglt2.org
[2025-04-18 09:22:54] apptainer works
[2025-04-18 09:22:54] Set ATHENA_PROC_NUMBER=12
[2025-04-18 09:22:54] Set ATHENA_CORE_NUMBER=12
[2025-04-18 09:22:54] Starting ATLAS job with PandaID=6606172364
[2025-04-18 09:22:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 10:39:56]  *** The last 200 lines of the pilot log: ***
[2025-04-18 10:39:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606172364/log.44075483._065242.job.log.tgz.1
[2025-04-18 10:39:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/b9/log.44075483._065242.job.log.tgz.1
[2025-04-18 10:39:56]  workdir=None
[2025-04-18 10:39:56] ]
[2025-04-18 10:39:56] 2025-04-18 14:39:30,376 | INFO     | transferring file log.44075483._065242.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/log.44075483._065242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 10:39:56] 2025-04-18 14:39:30,376 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/log.44075483._065242.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._065242.job
[2025-04-18 10:39:56] 2025-04-18 14:39:30,399 | INFO     | adding to output.list: log.44075483._065242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/b9/log.44075483._065242.job.log.tg
[2025-04-18 10:39:56] 2025-04-18 14:39:30,400 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 10:39:56] 2025-04-18 14:39:30,400 | INFO     | summary of transferred files:
[2025-04-18 10:39:56] 2025-04-18 14:39:30,400 | INFO     |  -- lfn=log.44075483._065242.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 10:39:56] 2025-04-18 14:39:30,400 | INFO     | stage-out finished correctly
[2025-04-18 10:39:56] 2025-04-18 14:39:30,481 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 10:39:56] 2025-04-18 14:39:30,626 | WARNING  | process 4363 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 10:39:56] 2025-04-18 14:39:30,626 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,633 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4359573 B
[2025-04-18 10:39:56] 2025-04-18 14:39:30,633 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-04-18 10:39:56] 2025-04-18 14:39:30,633 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 10:39:56] 2025-04-18 14:39:30,651 | INFO     | sufficient remaining disk space (18611175424 B)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,652 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,653 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6606172364: 4657944 B (within 2537553920 B limit)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,653 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6606172364/HITS.44075483._065242.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,653 | INFO     | total size of present files: 0 B (workdir size: 4657944 B)
[2025-04-18 10:39:56] 2025-04-18 14:39:30,653 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/HITS.44075483._065242.pool.root.1 since it does not exist
[2025-04-18 10:39:56] 2025-04-18 14:39:30,739 | INFO     | number of running child processes to parent process 4363: 1
[2025-04-18 10:39:56] 2025-04-18 14:39:30,740 | INFO     | maximum number of monitored processes: 6
[2025-04-18 10:39:56] 2025-04-18 14:39:32,443 | INFO     | PID=29744 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 10:39:56] 2025-04-18 14:39:32,837 | INFO     | job 6606172364 has state=finished
[2025-04-18 10:39:56] 2025-04-18 14:39:32,838 | INFO     | preparing for final server update for job 6606172364 in state='finished'
[2025-04-18 10:39:56] 2025-04-18 14:39:32,838 | INFO     | this job has now completed (state=finished)
[2025-04-18 10:39:56] 2025-04-18 14:39:32,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 10:39:56] 2025-04-18 14:39:32,839 | INFO     | log transfer has been attempted: DONE
[2025-04-18 10:39:56] 2025-04-18 14:39:32,839 | INFO     | job 6606172364 has finished - writing final server update
[2025-04-18 10:39:56] 2025-04-18 14:39:32,839 | INFO     | total number of processed events: 400 (read)
[2025-04-18 10:39:56] 2025-04-18 14:39:32,841 | INFO     | executing command: lscpu
[2025-04-18 10:39:56] 2025-04-18 14:39:32,870 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 10:39:56] 2025-04-18 14:39:33,241 | INFO     | monitor loop #344: job 0:6606172364 is in state 'finished'
[2025-04-18 10:39:56] 2025-04-18 14:39:33,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:39:56] 2025-04-18 14:39:35,744 | INFO     | monitor loop #345: job 0:6606172364 is in state 'finished'
[2025-04-18 10:39:56] 2025-04-18 14:39:35,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:39:56] 2025-04-18 14:39:37,757 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 10:39:56] 2025-04-18 14:39:37,757 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606172364/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:39:56] 2025-04-18 14:39:37,758 | INFO     | extracted standard info from prmon json
[2025-04-18 10:39:56] 2025-04-18 14:39:37,758 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 10:39:56] 2025-04-18 14:39:37,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 10:39:56] 2025-04-18 14:39:37,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 10:39:56] 2025-04-18 14:39:37,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 10:39:56] 2025-04-18 14:39:37,760 | INFO     | fitting pss+swap vs Time
[2025-04-18 10:39:56] 2025-04-18 14:39:37,760 | INFO     | sum of square deviations: 97479037.0
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | sum of deviations: 16238594639.500004
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | mean x: 1744984964.5
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | mean y: 2658584.279411765
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | -- intersect: -290686543551.9481
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | intersect: -290686543551.9481
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | chi2: 2.3520725341152393
[2025-04-18 10:39:56] 2025-04-18 14:39:37,761 | INFO     | -- intersect: -290686543551.9481
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | current memory leak: 166.59 B/s (using 68 data points, chi2=2.35)
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | ..............................
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | . Timing measurements:
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | . get job = 0 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | . initial setup = 2 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | . payload setup = 7 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,762 | INFO     | . stage-in = 0 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,763 | INFO     | . payload execution = 4556 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,763 | INFO     | . stage-out = 0 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,763 | INFO     | . log creation = 0 s
[2025-04-18 10:39:56] 2025-04-18 14:39:37,763 | INFO     | ..............................
[2025-04-18 10:39:56] 2025-04-18 14:39:38,062 | INFO     | 
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | job summary report
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | --------------------------------------------------
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | PanDA job id: 6606172364
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | task id: 44075483
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | errors: (none)
[2025-04-18 10:39:56] 2025-04-18 14:39:38,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | pilot state: finished 
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | transexitcode: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | exeerrorcode: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | exeerrordiag: 
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | exitcode: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:38,064 | INFO     | exitmsg: OK
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | cpuconsumptiontime: 41917 s
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | nevents: 400
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | neventsw: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | pid: 4363
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | pgrp: 4363
[2025-04-18 10:39:56] 2025-04-18 14:39:38,065 | INFO     | corecount: 12
[2025-04-18 10:39:56] 2025-04-18 14:39:38,066 | INFO     | event service: False
[2025-04-18 10:39:56] 2025-04-18 14:39:38,066 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 4567: 2453066, 4568: 2462063, 4575: 2462205}
[2025-04-18 10:39:56] 2025-04-18 14:39:38,066 | INFO     | --------------------------------------------------
[2025-04-18 10:39:56] 2025-04-18 14:39:38,066 | INFO     | 
[2025-04-18 10:39:56] 2025-04-18 14:39:38,066 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 10:39:56] 2025-04-18 14:39:38,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 10:39:56] 2025-04-18 14:39:38,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 10:39:56] 2025-04-18 14:39:38,093 | INFO     | job 6606172364 has completed (purged errors)
[2025-04-18 10:39:56] 2025-04-18 14:39:38,093 | INFO     | overall cleanup function is called
[2025-04-18 10:39:56] 2025-04-18 14:39:39,098 | INFO     | --- collectZombieJob: --- 10, [4363]
[2025-04-18 10:39:56] 2025-04-18 14:39:39,098 | INFO     | zombie collector waiting for pid 4363
[2025-04-18 10:39:56] 2025-04-18 14:39:39,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 10:39:56] 2025-04-18 14:39:39,098 | INFO     | collected zombie processes
[2025-04-18 10:39:56] 2025-04-18 14:39:39,099 | INFO     | will attempt to kill all subprocesses of pid=4363
[2025-04-18 10:39:56] 2025-04-18 14:39:39,185 | INFO     | process IDs to be killed: [4363] (in reverse order)
[2025-04-18 10:39:56] 2025-04-18 14:39:39,234 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 10:39:56] 2025-04-18 14:39:39,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 10:39:56] 2025-04-18 14:39:39,238 | INFO     | did not find any defunct processes belonging to 4363
[2025-04-18 10:39:56] 2025-04-18 14:39:39,240 | INFO     | did not find any defunct processes belonging to 4363
[2025-04-18 10:39:56] 2025-04-18 14:39:39,240 | INFO     | ready for new job
[2025-04-18 10:39:56] 2025-04-18 14:39:39,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 10:39:56] 2025-04-18 14:39:39,241 | INFO     | **************************************
[2025-04-18 10:39:56] 2025-04-18 14:39:39,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 10:39:56] 2025-04-18 14:39:39,241 | INFO     | **************************************
[2025-04-18 10:39:56] 2025-04-18 14:39:39,241 | INFO     | 
[2025-04-18 10:39:56] 2025-04-18 14:39:39,242 | INFO     | architecture information:
[2025-04-18 10:39:56] 2025-04-18 14:39:39,242 | INFO     | executing command: cat /etc/os-release
[2025-04-18 10:39:56] 2025-04-18 14:39:39,259 | INFO     | cat /etc/os-release:
[2025-04-18 10:39:56] NAME="CentOS Linux"
[2025-04-18 10:39:56] VERSION="7 (Core)"
[2025-04-18 10:39:56] ID="centos"
[2025-04-18 10:39:56] ID_LIKE="rhel fedora"
[2025-04-18 10:39:56] VERSION_ID="7"
[2025-04-18 10:39:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 10:39:56] ANSI_COLOR="0;31"
[2025-04-18 10:39:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 10:39:56] HOME_URL="https://www.centos.org/"
[2025-04-18 10:39:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 10:39:56] 
[2025-04-18 10:39:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 10:39:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 10:39:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 10:39:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 10:39:56] 
[2025-04-18 10:39:56] 2025-04-18 14:39:39,259 | INFO     | **************************************
[2025-04-18 10:39:56] 2025-04-18 14:39:39,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 10:39:56] 2025-04-18 14:39:39,781 | INFO     | sufficient remaining disk space (18616418304 B)
[2025-04-18 10:39:56] 2025-04-18 14:39:39,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 10:39:56] 2025-04-18 14:39:39,781 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 10:39:56] 2025-04-18 14:39:39,781 | INFO     | update_server=False
[2025-04-18 10:39:56] 2025-04-18 14:39:39,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 10:39:56] 2025-04-18 14:39:39,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:39:56] 2025-04-18 14:39:39,782 | INFO     | aborting loop
[2025-04-18 10:39:56] 2025-04-18 14:39:39,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:39:56] 2025-04-18 14:39:39,894 | INFO     | all payload control threads have been joined
[2025-04-18 10:39:56] 2025-04-18 14:39:39,907 | INFO     | all data control threads have been joined
[2025-04-18 10:39:56] 2025-04-18 14:39:40,460 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 10:39:56] 2025-04-18 14:39:40,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 10:39:56] 2025-04-18 14:39:40,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 10:39:56] 2025-04-18 14:39:40,786 | INFO     | [job] job monitor thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,787 | INFO     | [job] retrieve thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,788 | INFO     | [job] queue monitor thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,900 | INFO     | [payload] control thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,913 | INFO     | [data] control thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,958 | INFO     | [job] validate thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,958 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,987 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:40,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 10:39:56] 2025-04-18 14:39:41,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 10:39:56] 2025-04-18 14:39:41,128 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:41,282 | INFO     | [payload] failed_post thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:41,427 | INFO     | all job control threads have been joined
[2025-04-18 10:39:56] 2025-04-18 14:39:41,607 | INFO     | [data] copytool_in thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:41,905 | INFO     | [payload] validate_post thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:42,433 | INFO     | [job] control thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:42,998 | INFO     | [data] copytool_out thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:45,070 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:50,147 | INFO     | job.realtimelogging is not enabled
[2025-04-18 10:39:56] 2025-04-18 14:39:51,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 10:39:56] 2025-04-18 14:39:51,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744911193920)>', '<ExcThread(monitor, started 139744335881984)>']
[2025-04-18 10:39:56] 2025-04-18 14:39:52,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 10:39:56] 2025-04-18 14:39:52,520 | INFO     | [monitor] control thread has ended
[2025-04-18 10:39:56] 2025-04-18 14:39:56,598 | INFO     | all workflow threads have been joined
[2025-04-18 10:39:56] 2025-04-18 14:39:56,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 10:39:56] 2025-04-18 14:39:56,599 | INFO     | traces error code: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:56,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 10:39:56] 2025-04-18 14:39:56,695 [wrapper] ==== pilot stdout END ====
[2025-04-18 10:39:56] 2025-04-18 14:39:56,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 10:39:56] 2025-04-18 14:39:56,702 [wrapper] pilotpid: 29744
[2025-04-18 10:39:56] 2025-04-18 14:39:56,706 [wrapper] Pilot exit status: 0
[2025-04-18 10:39:56] 2025-04-18 14:39:56,722 [wrapper] pandaids: 6606172364
[2025-04-18 10:39:56] 2025-04-18 14:39:56,761 [wrapper] cleanup supervisor_pilot  7048 29747
[2025-04-18 10:39:56] 2025-04-18 14:39:56,765 [wrapper] Test setup, not cleaning
[2025-04-18 10:39:56] 2025-04-18 14:39:56,769 [wrapper] apfmon messages muted
[2025-04-18 10:39:56] 2025-04-18 14:39:56,773 [wrapper] ==== wrapper stdout END ====
[2025-04-18 10:39:56] 2025-04-18 14:39:56,777 [wrapper] ==== wrapper stderr END ====
[2025-04-18 10:39:56]  *** Error codes and diagnostics ***
[2025-04-18 10:39:56]     "exeErrorCode": 0,
[2025-04-18 10:39:56]     "exeErrorDiag": "",
[2025-04-18 10:39:56]     "pilotErrorCode": 0,
[2025-04-18 10:39:56]     "pilotErrorDiag": "",
[2025-04-18 10:39:56]  *** Listing of results directory ***
[2025-04-18 10:39:56] total 414832
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 01:55 pilot3.tar.gz
[2025-04-18 10:39:56] -rwx------ 1 boincer umatlas     37140 Apr 18 02:09 runpilot2-wrapper.sh
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 02:09 queuedata.json
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas       100 Apr 18 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 10:39:56] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 09:22 run_atlas
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas       105 Apr 18 09:22 job.xml
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas 225151507 Apr 18 09:22 EVNT.44075481._002536.pool.root.1
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:22 start_atlas.sh
[2025-04-18 10:39:56] drwxrwx--x 2 boincer umatlas      4096 Apr 18 09:22 shared
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 09:22 input.tar.gz
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas         0 Apr 18 09:22 boinc_lockfile
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 09:22 pandaJob.out
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas       424 Apr 18 09:22 setup.sh.local
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas    990604 Apr 18 09:23 agis_schedconf.cvmfs.json
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas   1618536 Apr 18 09:23 agis_ddmendpoints.agis.ALL.json
[2025-04-18 10:39:56] drwx------ 4 boincer umatlas      4096 Apr 18 09:23 pilot3
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas        95 Apr 18 10:39 pilot_heartbeat.json
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas 194161203 Apr 18 10:39 HITS.44075483._065242.pool.root.1
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas       529 Apr 18 10:39 boinc_task_state.xml
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas      5869 Apr 18 10:39 init_data.xml
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas      1049 Apr 18 10:39 memory_monitor_summary.json
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas    368353 Apr 18 10:39 log.44075483._065242.job.log.tgz.1
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas      7754 Apr 18 10:39 heartbeat.json
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas        27 Apr 18 10:39 wrapper_checkpoint.txt
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 10:39 boinc_mmap_file
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas      4425 Apr 18 10:39 pilotlog.txt
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas    441116 Apr 18 10:39 log.44075483._065242.job.log.1
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas       357 Apr 18 10:39 output.list
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas       620 Apr 18 10:39 runtime_log
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas    829440 Apr 18 10:39 result.tar.gz
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 10:39 runtime_log.err
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas       658 Apr 18 10:39 110KDml5tP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYaeLDmNYKF2m.diag
[2025-04-18 10:39:56] -rw-r--r-- 1 boincer umatlas     22515 Apr 18 10:39 stderr.txt
[2025-04-18 10:39:56] HITS file was successfully produced:
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas 194161203 Apr 18 10:39 shared/HITS.pool.root.1
[2025-04-18 10:39:56]  *** Contents of shared directory: ***
[2025-04-18 10:39:56] total 410820
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas 225151507 Apr 18 09:22 ATLAS.root_0
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:22 start_atlas.sh
[2025-04-18 10:39:56] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 09:22 input.tar.gz
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas 194161203 Apr 18 10:39 HITS.pool.root.1
[2025-04-18 10:39:56] -rw------- 1 boincer umatlas    829440 Apr 18 10:39 result.tar.gz
10:39:58 (26084): run_atlas exited; CPU time 41921.098793
10:39:58 (26084): called boinc_finish(0)

</stderr_txt>
]]>

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