Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:23 (27173): wrapper (7.7.26015): starting
09:31:23 (27173): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 09:31:23] Arguments: --nthreads 12
[2025-04-18 09:31:23] Threads: 12
[2025-04-18 09:31:23] Checking for CVMFS
[2025-04-18 09:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 09:31:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 09:31:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 09:31:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 09:31:23] 2.11.2.0 2994 217314 166180 145003 1 55 10649438 20275200 1 130560 0 23313437 99.950 8023741 49293 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 09:31:23] CVMFS is ok
[2025-04-18 09:31:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 09:31:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 09:31:23] Further information can be found at the LHC@home message board.
[2025-04-18 09:31:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 09:31:23] Checking for apptainer binary...
[2025-04-18 09:31:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 09:31:23] Running /usr/bin/apptainer --version
[2025-04-18 09:31:23] apptainer version 1.3.2-1.el7
[2025-04-18 09:31:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 09:31:24] c-205-21.aglt2.org
[2025-04-18 09:31:24] apptainer works
[2025-04-18 09:31:24] Set ATHENA_PROC_NUMBER=12
[2025-04-18 09:31:24] Set ATHENA_CORE_NUMBER=12
[2025-04-18 09:31:24] Starting ATLAS job with PandaID=6606295353
[2025-04-18 09:31:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 10:55:48]  *** The last 200 lines of the pilot log: ***
[2025-04-18 10:55:48]  mtime=0
[2025-04-18 10:55:48]  protocol_id=None
[2025-04-18 10:55:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 10:55:48]  replicas=None
[2025-04-18 10:55:48]  scope=mc23_13p6TeV
[2025-04-18 10:55:48]  status=None
[2025-04-18 10:55:48]  status_code=0
[2025-04-18 10:55:48]  storage_token=
[2025-04-18 10:55:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606295353/log.44075483._067800.job.log.tgz.1
[2025-04-18 10:55:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/81/log.44075483._067800.job.log.tgz.1
[2025-04-18 10:55:48]  workdir=None
[2025-04-18 10:55:48] ]
[2025-04-18 10:55:48] 2025-04-18 14:55:22,323 | INFO     | transferring file log.44075483._067800.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606295353/log.44075483._067800.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 10:55:48] 2025-04-18 14:55:22,324 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606295353/log.44075483._067800.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._067800.job
[2025-04-18 10:55:48] 2025-04-18 14:55:22,344 | INFO     | adding to output.list: log.44075483._067800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/81/log.44075483._067800.job.log.tg
[2025-04-18 10:55:48] 2025-04-18 14:55:22,345 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 10:55:48] 2025-04-18 14:55:22,345 | INFO     | summary of transferred files:
[2025-04-18 10:55:48] 2025-04-18 14:55:22,346 | INFO     |  -- lfn=log.44075483._067800.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 10:55:48] 2025-04-18 14:55:22,346 | INFO     | stage-out finished correctly
[2025-04-18 10:55:48] 2025-04-18 14:55:23,144 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 10:55:48] 2025-04-18 14:55:24,722 | WARNING  | process 4863 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 10:55:48] 2025-04-18 14:55:24,722 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606295353/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:55:48] 2025-04-18 14:55:24,812 | INFO     | number of running child processes to parent process 4863: 1
[2025-04-18 10:55:48] 2025-04-18 14:55:24,812 | INFO     | maximum number of monitored processes: 6
[2025-04-18 10:55:48] 2025-04-18 14:55:25,165 | INFO     | job 6606295353 has state=finished
[2025-04-18 10:55:48] 2025-04-18 14:55:25,165 | INFO     | preparing for final server update for job 6606295353 in state='finished'
[2025-04-18 10:55:48] 2025-04-18 14:55:25,166 | INFO     | this job has now completed (state=finished)
[2025-04-18 10:55:48] 2025-04-18 14:55:25,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 10:55:48] 2025-04-18 14:55:25,166 | INFO     | log transfer has been attempted: DONE
[2025-04-18 10:55:48] 2025-04-18 14:55:25,166 | INFO     | job 6606295353 has finished - writing final server update
[2025-04-18 10:55:48] 2025-04-18 14:55:25,167 | INFO     | total number of processed events: 400 (read)
[2025-04-18 10:55:48] 2025-04-18 14:55:25,168 | INFO     | executing command: lscpu
[2025-04-18 10:55:48] 2025-04-18 14:55:25,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 10:55:48] 2025-04-18 14:55:27,315 | INFO     | monitor loop #377: job 0:6606295353 is in state 'finished'
[2025-04-18 10:55:48] 2025-04-18 14:55:27,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:55:48] 2025-04-18 14:55:29,818 | INFO     | monitor loop #378: job 0:6606295353 is in state 'finished'
[2025-04-18 10:55:48] 2025-04-18 14:55:29,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:55:48] 2025-04-18 14:55:29,848 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 10:55:48] 2025-04-18 14:55:29,849 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606295353/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:55:48] 2025-04-18 14:55:29,850 | INFO     | extracted standard info from prmon json
[2025-04-18 10:55:48] 2025-04-18 14:55:29,850 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 10:55:48] 2025-04-18 14:55:29,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 10:55:48] 2025-04-18 14:55:29,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 10:55:48] 2025-04-18 14:55:29,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 10:55:48] 2025-04-18 14:55:29,852 | INFO     | fitting pss+swap vs Time
[2025-04-18 10:55:48] 2025-04-18 14:55:29,853 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 10:55:48] 2025-04-18 14:55:29,853 | INFO     | sum of deviations: 18350907428.0
[2025-04-18 10:55:48] 2025-04-18 14:55:29,853 | INFO     | mean x: 1744985689.0
[2025-04-18 10:55:48] 2025-04-18 14:55:29,853 | INFO     | mean y: 2581556.12
[2025-04-18 10:55:48] 2025-04-18 14:55:29,853 | INFO     | -- intersect: -244827295559.18613
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | intersect: -244827295559.18613
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | chi2: 2.226774910896874
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | -- intersect: -244827295559.18613
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | current memory leak: 140.30 B/s (using 75 data points, chi2=2.23)
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | ..............................
[2025-04-18 10:55:48] 2025-04-18 14:55:29,854 | INFO     | . Timing measurements:
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . get job = 0 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . initial setup = 2 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . payload setup = 7 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . stage-in = 0 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . payload execution = 4995 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . stage-out = 0 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | . log creation = 0 s
[2025-04-18 10:55:48] 2025-04-18 14:55:29,855 | INFO     | ..............................
[2025-04-18 10:55:48] 2025-04-18 14:55:30,098 | INFO     | 
[2025-04-18 10:55:48] 2025-04-18 14:55:30,099 | INFO     | job summary report
[2025-04-18 10:55:48] 2025-04-18 14:55:30,099 | INFO     | --------------------------------------------------
[2025-04-18 10:55:48] 2025-04-18 14:55:30,099 | INFO     | PanDA job id: 6606295353
[2025-04-18 10:55:48] 2025-04-18 14:55:30,099 | INFO     | task id: 44075483
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | errors: (none)
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | pilot state: finished 
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | transexitcode: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | exeerrorcode: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | exeerrordiag: 
[2025-04-18 10:55:48] 2025-04-18 14:55:30,100 | INFO     | exitcode: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | exitmsg: OK
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | cpuconsumptiontime: 46831 s
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | nevents: 400
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | neventsw: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | pid: 4863
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | pgrp: 4863
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | corecount: 12
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | event service: False
[2025-04-18 10:55:48] 2025-04-18 14:55:30,101 | INFO     | sizes: {0: 2426653, 1: 2426852, 5: 2427058, 11: 2427114, 5007: 2453266, 5009: 2462391, 5016: 2462505}
[2025-04-18 10:55:48] 2025-04-18 14:55:30,102 | INFO     | --------------------------------------------------
[2025-04-18 10:55:48] 2025-04-18 14:55:30,102 | INFO     | 
[2025-04-18 10:55:48] 2025-04-18 14:55:30,102 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 10:55:48] 2025-04-18 14:55:30,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 10:55:48] 2025-04-18 14:55:30,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 10:55:48] 2025-04-18 14:55:30,127 | INFO     | job 6606295353 has completed (purged errors)
[2025-04-18 10:55:48] 2025-04-18 14:55:30,127 | INFO     | overall cleanup function is called
[2025-04-18 10:55:48] 2025-04-18 14:55:31,134 | INFO     | --- collectZombieJob: --- 10, [4863]
[2025-04-18 10:55:48] 2025-04-18 14:55:31,134 | INFO     | zombie collector waiting for pid 4863
[2025-04-18 10:55:48] 2025-04-18 14:55:31,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 10:55:48] 2025-04-18 14:55:31,134 | INFO     | collected zombie processes
[2025-04-18 10:55:48] 2025-04-18 14:55:31,134 | INFO     | will attempt to kill all subprocesses of pid=4863
[2025-04-18 10:55:48] 2025-04-18 14:55:31,226 | INFO     | process IDs to be killed: [4863] (in reverse order)
[2025-04-18 10:55:48] 2025-04-18 14:55:31,275 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 10:55:48] 2025-04-18 14:55:31,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 10:55:48] 2025-04-18 14:55:31,279 | INFO     | did not find any defunct processes belonging to 4863
[2025-04-18 10:55:48] 2025-04-18 14:55:31,282 | INFO     | did not find any defunct processes belonging to 4863
[2025-04-18 10:55:48] 2025-04-18 14:55:31,282 | INFO     | ready for new job
[2025-04-18 10:55:48] 2025-04-18 14:55:31,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 10:55:48] 2025-04-18 14:55:31,283 | INFO     | **************************************
[2025-04-18 10:55:48] 2025-04-18 14:55:31,284 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 10:55:48] 2025-04-18 14:55:31,284 | INFO     | **************************************
[2025-04-18 10:55:48] 2025-04-18 14:55:31,284 | INFO     | 
[2025-04-18 10:55:48] 2025-04-18 14:55:31,284 | INFO     | architecture information:
[2025-04-18 10:55:48] 2025-04-18 14:55:31,285 | INFO     | executing command: cat /etc/os-release
[2025-04-18 10:55:48] 2025-04-18 14:55:31,298 | INFO     | cat /etc/os-release:
[2025-04-18 10:55:48] NAME="CentOS Linux"
[2025-04-18 10:55:48] VERSION="7 (Core)"
[2025-04-18 10:55:48] ID="centos"
[2025-04-18 10:55:48] ID_LIKE="rhel fedora"
[2025-04-18 10:55:48] VERSION_ID="7"
[2025-04-18 10:55:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 10:55:48] ANSI_COLOR="0;31"
[2025-04-18 10:55:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 10:55:48] HOME_URL="https://www.centos.org/"
[2025-04-18 10:55:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 10:55:48] 
[2025-04-18 10:55:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 10:55:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 10:55:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 10:55:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 10:55:48] 
[2025-04-18 10:55:48] 2025-04-18 14:55:31,298 | INFO     | **************************************
[2025-04-18 10:55:48] 2025-04-18 14:55:31,801 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 10:55:48] 2025-04-18 14:55:31,826 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-04-18 10:55:48] 2025-04-18 14:55:31,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 10:55:48] 2025-04-18 14:55:31,878 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 10:55:48] 2025-04-18 14:55:31,878 | INFO     | update_server=False
[2025-04-18 10:55:48] 2025-04-18 14:55:31,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 10:55:48] 2025-04-18 14:55:31,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:55:48] 2025-04-18 14:55:31,960 | INFO     | all payload control threads have been joined
[2025-04-18 10:55:48] 2025-04-18 14:55:32,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 10:55:48] 2025-04-18 14:55:32,321 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 10:55:48] 2025-04-18 14:55:32,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:55:48] 2025-04-18 14:55:32,322 | INFO     | will abort loop
[2025-04-18 10:55:48] 2025-04-18 14:55:32,547 | INFO     | PID=30805 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 10:55:48] 2025-04-18 14:55:32,548 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 10:55:48] 2025-04-18 14:55:32,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 10:55:48] 2025-04-18 14:55:32,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 10:55:48] 2025-04-18 14:55:32,553 | INFO     | all data control threads have been joined
[2025-04-18 10:55:48] 2025-04-18 14:55:32,611 | INFO     | all job control threads have been joined
[2025-04-18 10:55:48] 2025-04-18 14:55:32,882 | INFO     | [job] retrieve thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:32,883 | INFO     | [job] queue monitor thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:32,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 10:55:48] 2025-04-18 14:55:32,966 | INFO     | [payload] control thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,089 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,129 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,158 | INFO     | [payload] validate_post thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,327 | INFO     | [job] job monitor thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,487 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,558 | INFO     | [data] control thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,607 | INFO     | [data] copytool_in thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,617 | INFO     | [job] control thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:33,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 10:55:48] 2025-04-18 14:55:34,153 | INFO     | [job] validate thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:34,294 | INFO     | [payload] failed_post thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:34,951 | INFO     | [data] copytool_out thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:37,741 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:42,547 | INFO     | job.realtimelogging is not enabled
[2025-04-18 10:55:48] 2025-04-18 14:55:43,552 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 10:55:48] 2025-04-18 14:55:43,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372429231936)>', '<ExcThread(monitor, started 140371543717632)>']
[2025-04-18 10:55:48] 2025-04-18 14:55:43,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 10:55:48] 2025-04-18 14:55:43,604 | INFO     | [monitor] control thread has ended
[2025-04-18 10:55:48] 2025-04-18 14:55:48,580 | INFO     | all workflow threads have been joined
[2025-04-18 10:55:48] 2025-04-18 14:55:48,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 10:55:48] 2025-04-18 14:55:48,597 | INFO     | traces error code: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:48,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 10:55:48] 2025-04-18 14:55:48,687 [wrapper] ==== pilot stdout END ====
[2025-04-18 10:55:48] 2025-04-18 14:55:48,691 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 10:55:48] 2025-04-18 14:55:48,695 [wrapper] pilotpid: 30805
[2025-04-18 10:55:48] 2025-04-18 14:55:48,698 [wrapper] Pilot exit status: 0
[2025-04-18 10:55:48] 2025-04-18 14:55:48,714 [wrapper] pandaids: 6606295353
[2025-04-18 10:55:48] 2025-04-18 14:55:48,754 [wrapper] cleanup supervisor_pilot  2576 30806
[2025-04-18 10:55:48] 2025-04-18 14:55:48,758 [wrapper] Test setup, not cleaning
[2025-04-18 10:55:48] 2025-04-18 14:55:48,762 [wrapper] apfmon messages muted
[2025-04-18 10:55:48] 2025-04-18 14:55:48,766 [wrapper] ==== wrapper stdout END ====
[2025-04-18 10:55:48] 2025-04-18 14:55:48,770 [wrapper] ==== wrapper stderr END ====
[2025-04-18 10:55:48]  *** Error codes and diagnostics ***
[2025-04-18 10:55:48]     "exeErrorCode": 0,
[2025-04-18 10:55:48]     "exeErrorDiag": "",
[2025-04-18 10:55:48]     "pilotErrorCode": 0,
[2025-04-18 10:55:48]     "pilotErrorDiag": "",
[2025-04-18 10:55:48]  *** Listing of results directory ***
[2025-04-18 10:55:48] total 413736
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 05:49 pilot3.tar.gz
[2025-04-18 10:55:48] -rwx------ 1 boincer umatlas     37140 Apr 18 06:02 runpilot2-wrapper.sh
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 06:02 queuedata.json
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas       100 Apr 18 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 10:55:48] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 09:31 run_atlas
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas       105 Apr 18 09:31 job.xml
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas 223190552 Apr 18 09:31 EVNT.44075481._002635.pool.root.1
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:31 start_atlas.sh
[2025-04-18 10:55:48] drwxrwx--x 2 boincer umatlas      4096 Apr 18 09:31 shared
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 09:31 input.tar.gz
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas         0 Apr 18 09:31 boinc_lockfile
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 09:31 pandaJob.out
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas       424 Apr 18 09:31 setup.sh.local
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas    990604 Apr 18 09:31 agis_schedconf.cvmfs.json
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas   1618536 Apr 18 09:31 agis_ddmendpoints.agis.ALL.json
[2025-04-18 10:55:48] drwx------ 4 boincer umatlas      4096 Apr 18 09:31 pilot3
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 10:46 init_data.xml
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas        95 Apr 18 10:54 pilot_heartbeat.json
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas       529 Apr 18 10:54 boinc_task_state.xml
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas 194902872 Apr 18 10:54 HITS.44075483._067800.pool.root.1
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas      1052 Apr 18 10:55 memory_monitor_summary.json
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 10:55 boinc_mmap_file
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas    380300 Apr 18 10:55 log.44075483._067800.job.log.tgz.1
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas        27 Apr 18 10:55 wrapper_checkpoint.txt
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas      7759 Apr 18 10:55 heartbeat.json
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas      4928 Apr 18 10:55 pilotlog.txt
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas    477998 Apr 18 10:55 log.44075483._067800.job.log.1
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas       357 Apr 18 10:55 output.list
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas       620 Apr 18 10:55 runtime_log
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas    880640 Apr 18 10:55 result.tar.gz
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 10:55 runtime_log.err
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas       658 Apr 18 10:55 NX0NDm6ixP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmT14KDmIYKRHo.diag
[2025-04-18 10:55:48] -rw-r--r-- 1 boincer umatlas     21666 Apr 18 10:55 stderr.txt
[2025-04-18 10:55:48] HITS file was successfully produced:
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas 194902872 Apr 18 10:54 shared/HITS.pool.root.1
[2025-04-18 10:55:48]  *** Contents of shared directory: ***
[2025-04-18 10:55:48] total 409676
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas 223190552 Apr 18 09:31 ATLAS.root_0
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 09:31 start_atlas.sh
[2025-04-18 10:55:48] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 09:31 input.tar.gz
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas 194902872 Apr 18 10:54 HITS.pool.root.1
[2025-04-18 10:55:48] -rw------- 1 boincer umatlas    880640 Apr 18 10:55 result.tar.gz
10:55:50 (27173): run_atlas exited; CPU time 46804.721100
10:55:50 (27173): called boinc_finish(0)

</stderr_txt>
]]>

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