Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:18 (8077): wrapper (7.7.26015): starting
08:47:18 (8077): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 08:47:18] Arguments: --nthreads 12
[2025-04-18 08:47:18] Threads: 12
[2025-04-18 08:47:18] Checking for CVMFS
[2025-04-18 08:47:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 08:47:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 08:47:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 08:47:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 08:47:19] 2.11.2.0 28060 385638 170092 145002 2 58 10157519 20275201 1 130560 0 22877249 99.970 7403991 53777 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 08:47:19] CVMFS is ok
[2025-04-18 08:47:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 08:47:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 08:47:19] Further information can be found at the LHC@home message board.
[2025-04-18 08:47:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 08:47:19] Checking for apptainer binary...
[2025-04-18 08:47:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 08:47:19] Running /usr/bin/apptainer --version
[2025-04-18 08:47:19] apptainer version 1.3.2-1.el7
[2025-04-18 08:47:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 08:47:20] c-205-23.aglt2.org
[2025-04-18 08:47:20] apptainer works
[2025-04-18 08:47:20] Set ATHENA_PROC_NUMBER=12
[2025-04-18 08:47:20] Set ATHENA_CORE_NUMBER=12
[2025-04-18 08:47:20] Starting ATLAS job with PandaID=6606294131
[2025-04-18 08:47:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 10:08:45]  *** The last 200 lines of the pilot log: ***
[2025-04-18 10:08:45]  guid=7bd0b5cd-1465-4dc0-9382-d1e06689e8ba
[2025-04-18 10:08:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 10:08:45]  is_altstaged=None
[2025-04-18 10:08:45]  is_tar=False
[2025-04-18 10:08:45]  lfn=log.44075483._067423.job.log.tgz.1
[2025-04-18 10:08:45]  mtime=0
[2025-04-18 10:08:45]  protocol_id=None
[2025-04-18 10:08:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 10:08:45]  replicas=None
[2025-04-18 10:08:45]  scope=mc23_13p6TeV
[2025-04-18 10:08:45]  status=None
[2025-04-18 10:08:45]  status_code=0
[2025-04-18 10:08:45]  storage_token=
[2025-04-18 10:08:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606294131/log.44075483._067423.job.log.tgz.1
[2025-04-18 10:08:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/c6/log.44075483._067423.job.log.tgz.1
[2025-04-18 10:08:45]  workdir=None
[2025-04-18 10:08:45] ]
[2025-04-18 10:08:45] 2025-04-18 14:08:18,017 | INFO     | transferring file log.44075483._067423.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606294131/log.44075483._067423.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 10:08:45] 2025-04-18 14:08:18,017 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606294131/log.44075483._067423.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._067423.job
[2025-04-18 10:08:45] 2025-04-18 14:08:18,039 | INFO     | adding to output.list: log.44075483._067423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/c6/log.44075483._067423.job.log.tg
[2025-04-18 10:08:45] 2025-04-18 14:08:18,040 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 10:08:45] 2025-04-18 14:08:18,040 | INFO     | summary of transferred files:
[2025-04-18 10:08:45] 2025-04-18 14:08:18,041 | INFO     |  -- lfn=log.44075483._067423.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 10:08:45] 2025-04-18 14:08:18,041 | INFO     | stage-out finished correctly
[2025-04-18 10:08:45] 2025-04-18 14:08:18,169 | INFO     | monitor loop #362: job 0:6606294131 is in state 'finished'
[2025-04-18 10:08:45] 2025-04-18 14:08:18,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:08:45] 2025-04-18 14:08:18,497 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 10:08:45] 2025-04-18 14:08:20,320 | INFO     | job 6606294131 has state=finished
[2025-04-18 10:08:45] 2025-04-18 14:08:20,320 | INFO     | preparing for final server update for job 6606294131 in state='finished'
[2025-04-18 10:08:45] 2025-04-18 14:08:20,321 | INFO     | this job has now completed (state=finished)
[2025-04-18 10:08:45] 2025-04-18 14:08:20,321 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 10:08:45] 2025-04-18 14:08:20,321 | INFO     | log transfer has been attempted: DONE
[2025-04-18 10:08:45] 2025-04-18 14:08:20,321 | INFO     | job 6606294131 has finished - writing final server update
[2025-04-18 10:08:45] 2025-04-18 14:08:20,322 | INFO     | total number of processed events: 400 (read)
[2025-04-18 10:08:45] 2025-04-18 14:08:20,323 | INFO     | executing command: lscpu
[2025-04-18 10:08:45] 2025-04-18 14:08:20,353 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 10:08:45] 2025-04-18 14:08:20,672 | INFO     | monitor loop #363: job 0:6606294131 is in state 'finished'
[2025-04-18 10:08:45] 2025-04-18 14:08:20,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:08:45] 2025-04-18 14:08:23,175 | INFO     | monitor loop #364: job 0:6606294131 is in state 'finished'
[2025-04-18 10:08:45] 2025-04-18 14:08:23,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,091 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 10:08:45] 2025-04-18 14:08:25,091 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606294131/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,092 | INFO     | extracted standard info from prmon json
[2025-04-18 10:08:45] 2025-04-18 14:08:25,092 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 10:08:45] 2025-04-18 14:08:25,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 10:08:45] 2025-04-18 14:08:25,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 10:08:45] 2025-04-18 14:08:25,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 10:08:45] 2025-04-18 14:08:25,096 | INFO     | fitting pss+swap vs Time
[2025-04-18 10:08:45] 2025-04-18 14:08:25,096 | INFO     | sum of square deviations: 115715658.0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,097 | INFO     | sum of deviations: 18674810992.5
[2025-04-18 10:08:45] 2025-04-18 14:08:25,097 | INFO     | mean x: 1744982952.5
[2025-04-18 10:08:45] 2025-04-18 14:08:25,097 | INFO     | mean y: 2565113.0416666665
[2025-04-18 10:08:45] 2025-04-18 14:08:25,097 | INFO     | -- intersect: -281612104727.68207
[2025-04-18 10:08:45] 2025-04-18 14:08:25,098 | INFO     | intersect: -281612104727.68207
[2025-04-18 10:08:45] 2025-04-18 14:08:25,098 | INFO     | chi2: 2.099813319722278
[2025-04-18 10:08:45] 2025-04-18 14:08:25,098 | INFO     | -- intersect: -281612104727.68207
[2025-04-18 10:08:45] 2025-04-18 14:08:25,098 | INFO     | current memory leak: 161.39 B/s (using 72 data points, chi2=2.10)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,098 | INFO     | ..............................
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . Timing measurements:
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . get job = 0 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . initial setup = 2 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . payload setup = 7 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . stage-in = 0 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . payload execution = 4816 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . stage-out = 0 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | . log creation = 0 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,099 | INFO     | ..............................
[2025-04-18 10:08:45] 2025-04-18 14:08:25,418 | INFO     | 
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | job summary report
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | --------------------------------------------------
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | PanDA job id: 6606294131
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | task id: 44075483
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | errors: (none)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | pilot state: finished 
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | transexitcode: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | exeerrorcode: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | exeerrordiag: 
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | exitcode: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,420 | INFO     | exitmsg: OK
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | cpuconsumptiontime: 45774 s
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | nevents: 400
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | neventsw: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | pid: 18061
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | pgrp: 18061
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | corecount: 12
[2025-04-18 10:08:45] 2025-04-18 14:08:25,421 | INFO     | event service: False
[2025-04-18 10:08:45] 2025-04-18 14:08:25,422 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4827: 2453128, 4828: 2462069, 4829: 2462125, 4835: 2462423}
[2025-04-18 10:08:45] 2025-04-18 14:08:25,422 | INFO     | --------------------------------------------------
[2025-04-18 10:08:45] 2025-04-18 14:08:25,422 | INFO     | 
[2025-04-18 10:08:45] 2025-04-18 14:08:25,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 10:08:45] 2025-04-18 14:08:25,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 10:08:45] 2025-04-18 14:08:25,447 | INFO     | job 6606294131 has completed (purged errors)
[2025-04-18 10:08:45] 2025-04-18 14:08:25,448 | INFO     | overall cleanup function is called
[2025-04-18 10:08:45] 2025-04-18 14:08:26,451 | INFO     | --- collectZombieJob: --- 10, [18061]
[2025-04-18 10:08:45] 2025-04-18 14:08:26,451 | INFO     | zombie collector waiting for pid 18061
[2025-04-18 10:08:45] 2025-04-18 14:08:26,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 10:08:45] 2025-04-18 14:08:26,451 | INFO     | collected zombie processes
[2025-04-18 10:08:45] 2025-04-18 14:08:26,451 | INFO     | will attempt to kill all subprocesses of pid=18061
[2025-04-18 10:08:45] 2025-04-18 14:08:26,542 | INFO     | process IDs to be killed: [18061] (in reverse order)
[2025-04-18 10:08:45] 2025-04-18 14:08:26,593 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 10:08:45] 2025-04-18 14:08:26,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 10:08:45] 2025-04-18 14:08:26,597 | INFO     | did not find any defunct processes belonging to 18061
[2025-04-18 10:08:45] 2025-04-18 14:08:26,600 | INFO     | did not find any defunct processes belonging to 18061
[2025-04-18 10:08:45] 2025-04-18 14:08:26,600 | INFO     | ready for new job
[2025-04-18 10:08:45] 2025-04-18 14:08:26,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 10:08:45] 2025-04-18 14:08:26,601 | INFO     | **************************************
[2025-04-18 10:08:45] 2025-04-18 14:08:26,601 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 10:08:45] 2025-04-18 14:08:26,601 | INFO     | **************************************
[2025-04-18 10:08:45] 2025-04-18 14:08:26,601 | INFO     | 
[2025-04-18 10:08:45] 2025-04-18 14:08:26,602 | INFO     | architecture information:
[2025-04-18 10:08:45] 2025-04-18 14:08:26,602 | INFO     | executing command: cat /etc/os-release
[2025-04-18 10:08:45] 2025-04-18 14:08:26,616 | INFO     | cat /etc/os-release:
[2025-04-18 10:08:45] NAME="CentOS Linux"
[2025-04-18 10:08:45] VERSION="7 (Core)"
[2025-04-18 10:08:45] ID="centos"
[2025-04-18 10:08:45] ID_LIKE="rhel fedora"
[2025-04-18 10:08:45] VERSION_ID="7"
[2025-04-18 10:08:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 10:08:45] ANSI_COLOR="0;31"
[2025-04-18 10:08:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 10:08:45] HOME_URL="https://www.centos.org/"
[2025-04-18 10:08:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 10:08:45] 
[2025-04-18 10:08:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 10:08:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 10:08:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 10:08:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 10:08:45] 
[2025-04-18 10:08:45] 2025-04-18 14:08:26,616 | INFO     | **************************************
[2025-04-18 10:08:45] 2025-04-18 14:08:27,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 10:08:45] 2025-04-18 14:08:27,181 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-04-18 10:08:45] 2025-04-18 14:08:27,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 10:08:45] 2025-04-18 14:08:27,181 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 10:08:45] 2025-04-18 14:08:27,182 | INFO     | update_server=False
[2025-04-18 10:08:45] 2025-04-18 14:08:27,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 10:08:45] 2025-04-18 14:08:27,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:08:45] 2025-04-18 14:08:27,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:08:45] 2025-04-18 14:08:27,183 | INFO     | aborting loop
[2025-04-18 10:08:45] 2025-04-18 14:08:27,371 | INFO     | all payload control threads have been joined
[2025-04-18 10:08:45] 2025-04-18 14:08:27,692 | INFO     | all data control threads have been joined
[2025-04-18 10:08:45] 2025-04-18 14:08:27,758 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 10:08:45] 2025-04-18 14:08:27,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 10:08:45] 2025-04-18 14:08:27,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 10:08:45] 2025-04-18 14:08:27,999 | INFO     | all job control threads have been joined
[2025-04-18 10:08:45] 2025-04-18 14:08:28,187 | INFO     | [job] retrieve thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,188 | INFO     | [job] queue monitor thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,188 | INFO     | [job] job monitor thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,377 | INFO     | [payload] control thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 10:08:45] 2025-04-18 14:08:28,651 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,684 | INFO     | [payload] failed_post thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,697 | INFO     | [data] control thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,705 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,968 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:28,973 | INFO     | [data] copytool_in thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:29,004 | INFO     | [job] control thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:29,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 10:08:45] 2025-04-18 14:08:29,356 | INFO     | [job] validate thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:29,444 | INFO     | [payload] validate_post thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:30,645 | INFO     | [data] copytool_out thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:33,095 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:38,051 | INFO     | job.realtimelogging is not enabled
[2025-04-18 10:08:45] 2025-04-18 14:08:39,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 10:08:45] 2025-04-18 14:08:40,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924385466176)>', '<ExcThread(monitor, started 139923499763456)>']
[2025-04-18 10:08:45] 2025-04-18 14:08:40,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 10:08:45] 2025-04-18 14:08:40,811 | INFO     | [monitor] control thread has ended
[2025-04-18 10:08:45] 2025-04-18 14:08:45,640 | INFO     | all workflow threads have been joined
[2025-04-18 10:08:45] 2025-04-18 14:08:45,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 10:08:45] 2025-04-18 14:08:45,642 | INFO     | traces error code: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:45,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 10:08:45] 2025-04-18 14:08:45,732 [wrapper] ==== pilot stdout END ====
[2025-04-18 10:08:45] 2025-04-18 14:08:45,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 10:08:45] 2025-04-18 14:08:45,740 [wrapper] pilotpid: 11690
[2025-04-18 10:08:45] 2025-04-18 14:08:45,744 [wrapper] Pilot exit status: 0
[2025-04-18 10:08:45] 2025-04-18 14:08:45,759 [wrapper] pandaids: 6606294131
[2025-04-18 10:08:45] 2025-04-18 14:08:45,798 [wrapper] cleanup supervisor_pilot  3629 11691
[2025-04-18 10:08:45] 2025-04-18 14:08:45,801 [wrapper] Test setup, not cleaning
[2025-04-18 10:08:45] 2025-04-18 14:08:45,805 [wrapper] apfmon messages muted
[2025-04-18 10:08:45] 2025-04-18 14:08:45,809 [wrapper] ==== wrapper stdout END ====
[2025-04-18 10:08:45] 2025-04-18 14:08:45,813 [wrapper] ==== wrapper stderr END ====
[2025-04-18 10:08:45]  *** Error codes and diagnostics ***
[2025-04-18 10:08:45]     "exeErrorCode": 0,
[2025-04-18 10:08:45]     "exeErrorDiag": "",
[2025-04-18 10:08:45]     "pilotErrorCode": 0,
[2025-04-18 10:08:45]     "pilotErrorDiag": "",
[2025-04-18 10:08:45]  *** Listing of results directory ***
[2025-04-18 10:08:45] total 412464
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 04:46 pilot3.tar.gz
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 05:29 queuedata.json
[2025-04-18 10:08:45] -rwx------ 1 boincer umatlas     37140 Apr 18 05:29 runpilot2-wrapper.sh
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas       100 Apr 18 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 10:08:45] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 08:47 run_atlas
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas       105 Apr 18 08:47 job.xml
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas 221381034 Apr 18 08:47 EVNT.44075481._002620.pool.root.1
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 08:47 start_atlas.sh
[2025-04-18 10:08:45] drwxrwx--x 2 boincer umatlas      4096 Apr 18 08:47 shared
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas    508890 Apr 18 08:47 input.tar.gz
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas         0 Apr 18 08:47 boinc_lockfile
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 08:47 pandaJob.out
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas       424 Apr 18 08:47 setup.sh.local
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas    990604 Apr 18 08:47 agis_schedconf.cvmfs.json
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas   1618536 Apr 18 08:47 agis_ddmendpoints.agis.ALL.json
[2025-04-18 10:08:45] drwx------ 4 boincer umatlas      4096 Apr 18 08:47 pilot3
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 10:04 init_data.xml
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas        95 Apr 18 10:07 pilot_heartbeat.json
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas 195439014 Apr 18 10:07 HITS.44075483._067423.pool.root.1
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas      1049 Apr 18 10:08 memory_monitor_summary.json
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas       529 Apr 18 10:08 boinc_task_state.xml
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas    377334 Apr 18 10:08 log.44075483._067423.job.log.tgz.1
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas      7767 Apr 18 10:08 heartbeat.json
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 10:08 boinc_mmap_file
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas        27 Apr 18 10:08 wrapper_checkpoint.txt
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas      4425 Apr 18 10:08 pilotlog.txt
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas    462253 Apr 18 10:08 log.44075483._067423.job.log.1
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas       357 Apr 18 10:08 output.list
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas       620 Apr 18 10:08 runtime_log
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas    860160 Apr 18 10:08 result.tar.gz
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 10:08 runtime_log.err
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas       658 Apr 18 10:08 PK6KDmDDxP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUzeLDmUUfEHn.diag
[2025-04-18 10:08:45] -rw-r--r-- 1 boincer umatlas     21254 Apr 18 10:08 stderr.txt
[2025-04-18 10:08:45] HITS file was successfully produced:
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas 195439014 Apr 18 10:07 shared/HITS.pool.root.1
[2025-04-18 10:08:45]  *** Contents of shared directory: ***
[2025-04-18 10:08:45] total 408420
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas 221381034 Apr 18 08:47 ATLAS.root_0
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 08:47 start_atlas.sh
[2025-04-18 10:08:45] -rw-r--r-- 2 boincer umatlas    508890 Apr 18 08:47 input.tar.gz
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas 195439014 Apr 18 10:07 HITS.pool.root.1
[2025-04-18 10:08:45] -rw------- 1 boincer umatlas    860160 Apr 18 10:08 result.tar.gz
10:08:47 (8077): run_atlas exited; CPU time 45748.707122
10:08:47 (8077): called boinc_finish(0)

</stderr_txt>
]]>

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