Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:15:57 (13482): wrapper (7.7.26015): starting
08:15:57 (13482): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 08:15:57] Arguments: --nthreads 12
[2025-04-18 08:15:57] Threads: 12
[2025-04-18 08:15:57] Checking for CVMFS
[2025-04-18 08:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 08:15:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 08:15:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 08:15:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 08:15:57] 2.11.2.0 5876 86435 149136 145001 1 56 18674544 20275201 1 130560 0 22518688 99.969 7239322 52173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 08:15:57] CVMFS is ok
[2025-04-18 08:15:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 08:15:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 08:15:57] Further information can be found at the LHC@home message board.
[2025-04-18 08:15:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 08:15:57] Checking for apptainer binary...
[2025-04-18 08:15:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 08:15:57] Running /usr/bin/apptainer --version
[2025-04-18 08:15:57] apptainer version 1.3.2-1.el7
[2025-04-18 08:15:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 08:15:59] c-205-31.aglt2.org
[2025-04-18 08:15:59] apptainer works
[2025-04-18 08:15:59] Set ATHENA_PROC_NUMBER=12
[2025-04-18 08:15:59] Set ATHENA_CORE_NUMBER=12
[2025-04-18 08:15:59] Starting ATLAS job with PandaID=6606293918
[2025-04-18 08:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 09:39:54]  *** The last 200 lines of the pilot log: ***
[2025-04-18 09:39:54]  guid=70ddfae4-176d-4bff-b4dc-c2bef62fc6b9
[2025-04-18 09:39:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 09:39:54]  is_altstaged=None
[2025-04-18 09:39:54]  is_tar=False
[2025-04-18 09:39:54]  lfn=log.44075483._067244.job.log.tgz.1
[2025-04-18 09:39:54]  mtime=0
[2025-04-18 09:39:54]  protocol_id=None
[2025-04-18 09:39:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 09:39:54]  replicas=None
[2025-04-18 09:39:54]  scope=mc23_13p6TeV
[2025-04-18 09:39:54]  status=None
[2025-04-18 09:39:54]  status_code=0
[2025-04-18 09:39:54]  storage_token=
[2025-04-18 09:39:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606293918/log.44075483._067244.job.log.tgz.1
[2025-04-18 09:39:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/32/log.44075483._067244.job.log.tgz.1
[2025-04-18 09:39:54]  workdir=None
[2025-04-18 09:39:54] ]
[2025-04-18 09:39:54] 2025-04-18 13:39:31,841 | INFO     | transferring file log.44075483._067244.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606293918/log.44075483._067244.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 09:39:54] 2025-04-18 13:39:31,841 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606293918/log.44075483._067244.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._067244.job
[2025-04-18 09:39:54] 2025-04-18 13:39:31,864 | INFO     | adding to output.list: log.44075483._067244.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/32/log.44075483._067244.job.log.tg
[2025-04-18 09:39:54] 2025-04-18 13:39:31,865 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 09:39:54] 2025-04-18 13:39:31,865 | INFO     | summary of transferred files:
[2025-04-18 09:39:54] 2025-04-18 13:39:31,865 | INFO     |  -- lfn=log.44075483._067244.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 09:39:54] 2025-04-18 13:39:31,866 | INFO     | stage-out finished correctly
[2025-04-18 09:39:54] 2025-04-18 13:39:34,599 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 09:39:54] 2025-04-18 13:39:35,237 | INFO     | job 6606293918 has state=finished
[2025-04-18 09:39:54] 2025-04-18 13:39:35,238 | INFO     | preparing for final server update for job 6606293918 in state='finished'
[2025-04-18 09:39:54] 2025-04-18 13:39:35,238 | INFO     | this job has now completed (state=finished)
[2025-04-18 09:39:54] 2025-04-18 13:39:35,238 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 09:39:54] 2025-04-18 13:39:35,238 | INFO     | log transfer has been attempted: DONE
[2025-04-18 09:39:54] 2025-04-18 13:39:35,239 | INFO     | job 6606293918 has finished - writing final server update
[2025-04-18 09:39:54] 2025-04-18 13:39:35,239 | INFO     | total number of processed events: 400 (read)
[2025-04-18 09:39:54] 2025-04-18 13:39:35,240 | INFO     | executing command: lscpu
[2025-04-18 09:39:54] 2025-04-18 13:39:35,268 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 09:39:54] 2025-04-18 13:39:36,951 | WARNING  | process 24529 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 09:39:54] 2025-04-18 13:39:36,952 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606293918/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 09:39:54] 2025-04-18 13:39:37,040 | INFO     | number of running child processes to parent process 24529: 1
[2025-04-18 09:39:54] 2025-04-18 13:39:37,040 | INFO     | maximum number of monitored processes: 6
[2025-04-18 09:39:54] 2025-04-18 13:39:39,543 | INFO     | monitor loop #375: job 0:6606293918 is in state 'finished'
[2025-04-18 09:39:54] 2025-04-18 13:39:39,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,009 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 09:39:54] 2025-04-18 13:39:40,009 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606293918/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,010 | INFO     | extracted standard info from prmon json
[2025-04-18 09:39:54] 2025-04-18 13:39:40,010 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 09:39:54] 2025-04-18 13:39:40,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 09:39:54] 2025-04-18 13:39:40,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 09:39:54] 2025-04-18 13:39:40,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 09:39:54] 2025-04-18 13:39:40,014 | INFO     | fitting pss+swap vs Time
[2025-04-18 09:39:54] 2025-04-18 13:39:40,014 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,015 | INFO     | sum of deviations: 21356689260.0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,015 | INFO     | mean x: 1744981163.0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,015 | INFO     | mean y: 2660863.453333333
[2025-04-18 09:39:54] 2025-04-18 13:39:40,015 | INFO     | -- intersect: -284928319564.37805
[2025-04-18 09:39:54] 2025-04-18 13:39:40,015 | INFO     | intersect: -284928319564.37805
[2025-04-18 09:39:54] 2025-04-18 13:39:40,016 | INFO     | chi2: 2.45403849157374
[2025-04-18 09:39:54] 2025-04-18 13:39:40,016 | INFO     | -- intersect: -284928319564.37805
[2025-04-18 09:39:54] 2025-04-18 13:39:40,016 | INFO     | current memory leak: 163.29 B/s (using 75 data points, chi2=2.45)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | ..............................
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | . Timing measurements:
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | . get job = 0 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | . initial setup = 2 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | . payload setup = 7 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,017 | INFO     | . stage-in = 0 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,018 | INFO     | . payload execution = 4971 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,018 | INFO     | . stage-out = 0 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,018 | INFO     | . log creation = 0 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,018 | INFO     | ..............................
[2025-04-18 09:39:54] 2025-04-18 13:39:40,430 | INFO     | 
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | job summary report
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | --------------------------------------------------
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | PanDA job id: 6606293918
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | task id: 44075483
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | errors: (none)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | pilot state: finished 
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | transexitcode: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | exeerrorcode: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | exeerrordiag: 
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | exitcode: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,432 | INFO     | exitmsg: OK
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | cpuconsumptiontime: 47012 s
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | nevents: 400
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | neventsw: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | pid: 24529
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | pgrp: 24529
[2025-04-18 09:39:54] 2025-04-18 13:39:40,433 | INFO     | corecount: 12
[2025-04-18 09:39:54] 2025-04-18 13:39:40,434 | INFO     | event service: False
[2025-04-18 09:39:54] 2025-04-18 13:39:40,434 | INFO     | sizes: {0: 2426652, 1: 2426851, 6: 2427057, 12: 2427085, 4983: 2453184, 4984: 2462125, 4987: 2462309, 4992: 2462479}
[2025-04-18 09:39:54] 2025-04-18 13:39:40,434 | INFO     | --------------------------------------------------
[2025-04-18 09:39:54] 2025-04-18 13:39:40,434 | INFO     | 
[2025-04-18 09:39:54] 2025-04-18 13:39:40,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 09:39:54] 2025-04-18 13:39:40,458 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 09:39:54] 2025-04-18 13:39:40,462 | INFO     | job 6606293918 has completed (purged errors)
[2025-04-18 09:39:54] 2025-04-18 13:39:40,462 | INFO     | overall cleanup function is called
[2025-04-18 09:39:54] 2025-04-18 13:39:41,470 | INFO     | --- collectZombieJob: --- 10, [24529]
[2025-04-18 09:39:54] 2025-04-18 13:39:41,470 | INFO     | zombie collector waiting for pid 24529
[2025-04-18 09:39:54] 2025-04-18 13:39:41,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 09:39:54] 2025-04-18 13:39:41,470 | INFO     | collected zombie processes
[2025-04-18 09:39:54] 2025-04-18 13:39:41,470 | INFO     | will attempt to kill all subprocesses of pid=24529
[2025-04-18 09:39:54] 2025-04-18 13:39:41,562 | INFO     | process IDs to be killed: [24529] (in reverse order)
[2025-04-18 09:39:54] 2025-04-18 13:39:41,614 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 09:39:54] 2025-04-18 13:39:41,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 09:39:54] 2025-04-18 13:39:41,618 | INFO     | did not find any defunct processes belonging to 24529
[2025-04-18 09:39:54] 2025-04-18 13:39:41,621 | INFO     | did not find any defunct processes belonging to 24529
[2025-04-18 09:39:54] 2025-04-18 13:39:41,621 | INFO     | ready for new job
[2025-04-18 09:39:54] 2025-04-18 13:39:41,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 09:39:54] 2025-04-18 13:39:41,622 | INFO     | **************************************
[2025-04-18 09:39:54] 2025-04-18 13:39:41,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 09:39:54] 2025-04-18 13:39:41,622 | INFO     | **************************************
[2025-04-18 09:39:54] 2025-04-18 13:39:41,623 | INFO     | 
[2025-04-18 09:39:54] 2025-04-18 13:39:41,623 | INFO     | architecture information:
[2025-04-18 09:39:54] 2025-04-18 13:39:41,624 | INFO     | executing command: cat /etc/os-release
[2025-04-18 09:39:54] 2025-04-18 13:39:41,637 | INFO     | cat /etc/os-release:
[2025-04-18 09:39:54] NAME="CentOS Linux"
[2025-04-18 09:39:54] VERSION="7 (Core)"
[2025-04-18 09:39:54] ID="centos"
[2025-04-18 09:39:54] ID_LIKE="rhel fedora"
[2025-04-18 09:39:54] VERSION_ID="7"
[2025-04-18 09:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 09:39:54] ANSI_COLOR="0;31"
[2025-04-18 09:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 09:39:54] HOME_URL="https://www.centos.org/"
[2025-04-18 09:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 09:39:54] 
[2025-04-18 09:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 09:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 09:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 09:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 09:39:54] 
[2025-04-18 09:39:54] 2025-04-18 13:39:41,638 | INFO     | **************************************
[2025-04-18 09:39:54] 2025-04-18 13:39:42,141 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 09:39:54] 2025-04-18 13:39:42,158 | INFO     | sufficient remaining disk space (29397876736 B)
[2025-04-18 09:39:54] 2025-04-18 13:39:42,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 09:39:54] 2025-04-18 13:39:42,158 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 09:39:54] 2025-04-18 13:39:42,159 | INFO     | update_server=False
[2025-04-18 09:39:54] 2025-04-18 13:39:42,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 09:39:54] 2025-04-18 13:39:42,159 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 09:39:54] 2025-04-18 13:39:42,159 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 09:39:54] 2025-04-18 13:39:42,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 09:39:54] 2025-04-18 13:39:42,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 09:39:54] 2025-04-18 13:39:42,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 09:39:54] 2025-04-18 13:39:42,580 | INFO     | all data control threads have been joined
[2025-04-18 09:39:54] 2025-04-18 13:39:42,960 | INFO     | all payload control threads have been joined
[2025-04-18 09:39:54] 2025-04-18 13:39:43,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:39:54] 2025-04-18 13:39:43,052 | INFO     | aborting loop
[2025-04-18 09:39:54] 2025-04-18 13:39:43,164 | INFO     | [job] retrieve thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,217 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,329 | INFO     | [payload] validate_post thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,351 | INFO     | all job control threads have been joined
[2025-04-18 09:39:54] 2025-04-18 13:39:43,399 | INFO     | [data] copytool_in thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,586 | INFO     | [data] control thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,882 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:43,966 | INFO     | [payload] control thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,057 | INFO     | [job] job monitor thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,296 | INFO     | [payload] failed_post thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,357 | INFO     | [job] control thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,440 | INFO     | [job] validate thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,473 | INFO     | [data] copytool_out thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:44,634 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:45,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:39:54] 2025-04-18 13:39:45,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 09:39:54] 2025-04-18 13:39:46,118 | INFO     | [job] queue monitor thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:49,198 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 09:39:54] 2025-04-18 13:39:49,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242877572928)>', '<ExcThread(monitor, started 140242048755456)>']
[2025-04-18 09:39:54] 2025-04-18 13:39:50,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 09:39:54] 2025-04-18 13:39:50,205 | INFO     | [monitor] control thread has ended
[2025-04-18 09:39:54] 2025-04-18 13:39:54,317 | INFO     | all workflow threads have been joined
[2025-04-18 09:39:54] 2025-04-18 13:39:54,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 09:39:54] 2025-04-18 13:39:54,317 | INFO     | traces error code: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:54,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 09:39:54] 2025-04-18 13:39:54,403 [wrapper] ==== pilot stdout END ====
[2025-04-18 09:39:54] 2025-04-18 13:39:54,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 09:39:54] 2025-04-18 13:39:54,411 [wrapper] pilotpid: 17127
[2025-04-18 09:39:54] 2025-04-18 13:39:54,415 [wrapper] Pilot exit status: 0
[2025-04-18 09:39:54] 2025-04-18 13:39:54,430 [wrapper] pandaids: 6606293918
[2025-04-18 09:39:54] 2025-04-18 13:39:54,470 [wrapper] cleanup supervisor_pilot  6676 17128
[2025-04-18 09:39:54] 2025-04-18 13:39:54,474 [wrapper] Test setup, not cleaning
[2025-04-18 09:39:54] 2025-04-18 13:39:54,478 [wrapper] apfmon messages muted
[2025-04-18 09:39:54] 2025-04-18 13:39:54,482 [wrapper] ==== wrapper stdout END ====
[2025-04-18 09:39:54] 2025-04-18 13:39:54,486 [wrapper] ==== wrapper stderr END ====
[2025-04-18 09:39:54]  *** Error codes and diagnostics ***
[2025-04-18 09:39:54]     "exeErrorCode": 0,
[2025-04-18 09:39:54]     "exeErrorDiag": "",
[2025-04-18 09:39:54]     "pilotErrorCode": 0,
[2025-04-18 09:39:54]     "pilotErrorDiag": "",
[2025-04-18 09:39:54]  *** Listing of results directory ***
[2025-04-18 09:39:54] total 415192
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 04:46 pilot3.tar.gz
[2025-04-18 09:39:54] -rwx------ 1 boincer umatlas     37140 Apr 18 05:08 runpilot2-wrapper.sh
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 05:08 queuedata.json
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas       100 Apr 18 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 09:39:54] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 08:15 run_atlas
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas       105 Apr 18 08:15 job.xml
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas 223887804 Apr 18 08:15 EVNT.44075481._002613.pool.root.1
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 08:15 start_atlas.sh
[2025-04-18 09:39:54] drwxrwx--x 2 boincer umatlas      4096 Apr 18 08:15 shared
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 08:15 input.tar.gz
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas         0 Apr 18 08:15 boinc_lockfile
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 08:15 pandaJob.out
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas       424 Apr 18 08:16 setup.sh.local
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas    990572 Apr 18 08:16 agis_schedconf.cvmfs.json
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas   1618536 Apr 18 08:16 agis_ddmendpoints.agis.ALL.json
[2025-04-18 09:39:54] drwx------ 4 boincer umatlas      4096 Apr 18 08:16 pilot3
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 09:36 init_data.xml
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas 195705591 Apr 18 09:39 HITS.44075483._067244.pool.root.1
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas        95 Apr 18 09:39 pilot_heartbeat.json
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas        27 Apr 18 09:39 wrapper_checkpoint.txt
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 09:39 boinc_mmap_file
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas      1049 Apr 18 09:39 memory_monitor_summary.json
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas       529 Apr 18 09:39 boinc_task_state.xml
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas    371665 Apr 18 09:39 log.44075483._067244.job.log.tgz.1
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas      7756 Apr 18 09:39 heartbeat.json
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas      4476 Apr 18 09:39 pilotlog.txt
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas    476121 Apr 18 09:39 log.44075483._067244.job.log.1
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas       357 Apr 18 09:39 output.list
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas       620 Apr 18 09:39 runtime_log
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas    870400 Apr 18 09:39 result.tar.gz
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 09:39 runtime_log.err
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas       658 Apr 18 09:39 m0PODmFtwP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGz4KDmyW2oSn.diag
[2025-04-18 09:39:54] -rw-r--r-- 1 boincer umatlas     21317 Apr 18 09:39 stderr.txt
[2025-04-18 09:39:54] HITS file was successfully produced:
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas 195705591 Apr 18 09:39 shared/HITS.pool.root.1
[2025-04-18 09:39:54]  *** Contents of shared directory: ***
[2025-04-18 09:39:54] total 411140
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas 223887804 Apr 18 08:15 ATLAS.root_0
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 08:15 start_atlas.sh
[2025-04-18 09:39:54] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 08:15 input.tar.gz
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas 195705591 Apr 18 09:39 HITS.pool.root.1
[2025-04-18 09:39:54] -rw------- 1 boincer umatlas    870400 Apr 18 09:39 result.tar.gz
09:39:56 (13482): run_atlas exited; CPU time 46992.083333
09:39:56 (13482): called boinc_finish(0)

</stderr_txt>
]]>

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