Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:34 (1335745): wrapper (7.7.26015): starting
11:55:34 (1335745): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 11:55:34] Arguments: --nthreads 4
[2025-04-19 11:55:34] Threads: 4
[2025-04-19 11:55:34] Checking for CVMFS
[2025-04-19 11:55:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 11:55:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 11:55:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 11:55:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 11:55:34] 2.12.7.0 14133 1535 100388 145033 2 187 5355968 6144001 1832 130560 0 3660442 99.9968 391902 12182 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-04-19 11:55:34] CVMFS is ok
[2025-04-19 11:55:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 11:55:34] Checking for apptainer binary...
[2025-04-19 11:55:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 11:55:34] Running /usr/bin/apptainer --version
[2025-04-19 11:55:34] apptainer version 1.4.0
[2025-04-19 11:55:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 11:55:34] Ryzen5
[2025-04-19 11:55:34] apptainer works
[2025-04-19 11:55:34] Set ATHENA_PROC_NUMBER=4
[2025-04-19 11:55:34] Set ATHENA_CORE_NUMBER=4
[2025-04-19 11:55:34] Starting ATLAS job with PandaID=6606293852
[2025-04-19 11:55:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 13:39:21]  *** The last 200 lines of the pilot log: ***
[2025-04-19 13:39:21] 2025-04-19 11:39:02,646 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6606293852/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,647 | INFO     | extracted standard info from prmon json
[2025-04-19 13:39:21] 2025-04-19 11:39:02,647 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 13:39:21] 2025-04-19 11:39:02,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 13:39:21] 2025-04-19 11:39:02,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 13:39:21] 2025-04-19 11:39:02,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | fitting pss+swap vs Time
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | sum of square deviations: 329031285.5
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | sum of deviations: 11704015527.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | mean x: 1745059640.5
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | mean y: 2283115.7647058824
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | -- intersect: -62071464968.45216
[2025-04-19 13:39:21] 2025-04-19 11:39:02,649 | INFO     | intersect: -62071464968.45216
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | chi2: 2.582295099071091
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | sum of square deviations: 282974608.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | sum of deviations: 16782717658.999998
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | mean x: 1745059488.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | mean y: 2299149.3608247424
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | -- intersect: -103494056556.38892
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | intersect: -103494056556.38892
[2025-04-19 13:39:21] 2025-04-19 11:39:02,650 | INFO     | chi2: 1.9134410319011461
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | current chi2=1.9134410319011461 (change=25.90153493342208 %)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | sum of square deviations: 241429643.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | sum of deviations: 15853513198.999998
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | mean x: 1745059335.5
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | mean y: 2295742.4782608696
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | -- intersect: -114587283501.47322
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | intersect: -114587283501.47322
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | chi2: 1.91778477787447
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | current chi2=1.91778477787447 (change=-0.22701227270161295 %)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,651 | INFO     | right removable region: 91
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | sum of square deviations: 282974608.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | sum of deviations: -6902499347.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | mean x: 1745059793.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | mean y: 2343907.93814433
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | -- intersect: 42568969114.318695
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | intersect: 42568969114.318695
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | chi2: 0.7271203860437271
[2025-04-19 13:39:21] 2025-04-19 11:39:02,652 | INFO     | current chi2=0.7271203860437271 (change=71.84208782701526 %)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | sum of square deviations: 241429643.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | sum of deviations: -5107881756.5
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | mean x: 1745059945.5
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | mean y: 2337258.4239130435
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | -- intersect: 36922243815.29329
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | intersect: 36922243815.29329
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | chi2: 0.7171877420803907
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | current chi2=0.7171877420803907 (change=1.366024685042877 %)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | left removable region: 20
[2025-04-19 13:39:21] 2025-04-19 11:39:02,653 | INFO     | sum of square deviations: 110960220.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | sum of deviations: 547575589.0000001
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | mean x: 1745059915.0
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | mean y: 2356506.9295774647
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | -- intersect: -8609308203.14774
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | intersect: -8609308203.14774
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | chi2: 0.0009380201426086549
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | -- intersect: -8609308203.14774
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | current memory leak: 4.93 B/s (using 71 data points, chi2=0.00)
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | ..............................
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | . Timing measurements:
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | . get job = 0 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | . initial setup = 1 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | . payload setup = 3 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,654 | INFO     | . stage-in = 0 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,655 | INFO     | . payload execution = 6175 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,655 | INFO     | . stage-out = 0 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,655 | INFO     | . log creation = 0 s
[2025-04-19 13:39:21] 2025-04-19 11:39:02,655 | INFO     | ..............................
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | 
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | job summary report
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | --------------------------------------------------
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | PanDA job id: 6606293852
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | task id: 44075483
[2025-04-19 13:39:21] 2025-04-19 11:39:03,075 | INFO     | errors: (none)
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | pilot state: finished 
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | transexitcode: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | exeerrorcode: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | exeerrordiag: 
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | exitcode: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | exitmsg: OK
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | cpuconsumptiontime: 23085 s
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | nevents: 400
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | neventsw: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | pid: 1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | pgrp: 1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | corecount: 4
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | event service: False
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | sizes: {0: 2426652, 1: 2426851, 3: 2427057, 11: 2427085, 6181: 2454001, 6182: 2454000, 6183: 2463127, 6184: 2463183, 6189: 2463353}
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | --------------------------------------------------
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | 
[2025-04-19 13:39:21] 2025-04-19 11:39:03,076 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | job 6606293852 has completed (purged errors)
[2025-04-19 13:39:21] 2025-04-19 11:39:03,091 | INFO     | overall cleanup function is called
[2025-04-19 13:39:21] 2025-04-19 11:39:04,098 | INFO     | --- collectZombieJob: --- 10, [1345972]
[2025-04-19 13:39:21] 2025-04-19 11:39:04,098 | INFO     | zombie collector waiting for pid 1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:04,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 13:39:21] 2025-04-19 11:39:04,098 | INFO     | collected zombie processes
[2025-04-19 13:39:21] 2025-04-19 11:39:04,098 | INFO     | will attempt to kill all subprocesses of pid=1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:04,178 | INFO     | process IDs to be killed: [1345972] (in reverse order)
[2025-04-19 13:39:21] 2025-04-19 11:39:04,210 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 13:39:21] 2025-04-19 11:39:04,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 13:39:21] 2025-04-19 11:39:04,213 | INFO     | did not find any defunct processes belonging to 1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:04,215 | INFO     | did not find any defunct processes belonging to 1345972
[2025-04-19 13:39:21] 2025-04-19 11:39:04,215 | INFO     | ready for new job
[2025-04-19 13:39:21] 2025-04-19 11:39:04,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 13:39:21] 2025-04-19 11:39:04,216 | INFO     | **************************************
[2025-04-19 13:39:21] 2025-04-19 11:39:04,216 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 13:39:21] 2025-04-19 11:39:04,216 | INFO     | **************************************
[2025-04-19 13:39:21] 2025-04-19 11:39:04,216 | INFO     | 
[2025-04-19 13:39:21] 2025-04-19 11:39:04,217 | INFO     | architecture information:
[2025-04-19 13:39:21] 2025-04-19 11:39:04,217 | INFO     | executing command: cat /etc/os-release
[2025-04-19 13:39:21] 2025-04-19 11:39:04,226 | INFO     | cat /etc/os-release:
[2025-04-19 13:39:21] NAME="CentOS Linux"
[2025-04-19 13:39:21] VERSION="7 (Core)"
[2025-04-19 13:39:21] ID="centos"
[2025-04-19 13:39:21] ID_LIKE="rhel fedora"
[2025-04-19 13:39:21] VERSION_ID="7"
[2025-04-19 13:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 13:39:21] ANSI_COLOR="0;31"
[2025-04-19 13:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 13:39:21] HOME_URL="https://www.centos.org/"
[2025-04-19 13:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 13:39:21] 
[2025-04-19 13:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 13:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 13:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 13:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 13:39:21] 
[2025-04-19 13:39:21] 2025-04-19 11:39:04,226 | INFO     | **************************************
[2025-04-19 13:39:21] 2025-04-19 11:39:04,729 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-04-19 13:39:21] 2025-04-19 11:39:04,741 | INFO     | sufficient remaining disk space (82474696704 B)
[2025-04-19 13:39:21] 2025-04-19 11:39:04,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 13:39:21] 2025-04-19 11:39:04,742 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 13:39:21] 2025-04-19 11:39:04,742 | INFO     | update_server=False
[2025-04-19 13:39:21] 2025-04-19 11:39:04,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 13:39:21] 2025-04-19 11:39:04,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 13:39:21] 2025-04-19 11:39:04,749 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 13:39:21] 2025-04-19 11:39:04,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 13:39:21] 2025-04-19 11:39:04,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 13:39:21] 2025-04-19 11:39:05,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:39:21] 2025-04-19 11:39:05,030 | INFO     | aborting loop
[2025-04-19 13:39:21] 2025-04-19 11:39:05,206 | INFO     | all data control threads have been joined
[2025-04-19 13:39:21] 2025-04-19 11:39:05,708 | INFO     | all job control threads have been joined
[2025-04-19 13:39:21] 2025-04-19 11:39:05,744 | INFO     | [job] retrieve thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:05,780 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:05,959 | INFO     | [payload] validate_post thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:05,986 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,023 | INFO     | all payload control threads have been joined
[2025-04-19 13:39:21] 2025-04-19 11:39:06,035 | INFO     | [job] job monitor thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,211 | INFO     | [data] control thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,474 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,712 | INFO     | [job] control thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,746 | INFO     | [data] copytool_out thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,776 | INFO     | [data] copytool_in thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:06,993 | INFO     | [payload] failed_post thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:07,028 | INFO     | [payload] control thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:07,096 | INFO     | [job] validate thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:07,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:39:21] 2025-04-19 11:39:07,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 13:39:21] 2025-04-19 11:39:08,734 | INFO     | [job] queue monitor thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:11,996 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:14,959 | INFO     | job.realtimelogging is not enabled
[2025-04-19 13:39:21] 2025-04-19 11:39:15,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 13:39:21] 2025-04-19 11:39:16,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129443970807616)>', '<ExcThread(monitor, started 129443133650688)>']
[2025-04-19 13:39:21] 2025-04-19 11:39:16,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 13:39:21] 2025-04-19 11:39:16,789 | INFO     | [monitor] control thread has ended
[2025-04-19 13:39:21] 2025-04-19 11:39:21,359 | INFO     | all workflow threads have been joined
[2025-04-19 13:39:21] 2025-04-19 11:39:21,359 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 13:39:21] 2025-04-19 11:39:21,359 | INFO     | traces error code: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:21,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 13:39:21] 2025-04-19 11:39:21,428 [wrapper] ==== pilot stdout END ====
[2025-04-19 13:39:21] 2025-04-19 11:39:21,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 13:39:21] 2025-04-19 11:39:21,432 [wrapper] pilotpid: 1339441
[2025-04-19 13:39:21] 2025-04-19 11:39:21,433 [wrapper] Pilot exit status: 0
[2025-04-19 13:39:21] 2025-04-19 11:39:21,439 [wrapper] pandaids: 6606293852
[2025-04-19 13:39:21] 2025-04-19 11:39:21,461 [wrapper] cleanup supervisor_pilot 1406083 1339442
[2025-04-19 13:39:21] 2025-04-19 11:39:21,463 [wrapper] Test setup, not cleaning
[2025-04-19 13:39:21] 2025-04-19 11:39:21,464 [wrapper] apfmon messages muted
[2025-04-19 13:39:21] 2025-04-19 11:39:21,466 [wrapper] ==== wrapper stdout END ====
[2025-04-19 13:39:21] 2025-04-19 11:39:21,468 [wrapper] ==== wrapper stderr END ====
[2025-04-19 13:39:21]  *** Error codes and diagnostics ***
[2025-04-19 13:39:21]     "exeErrorCode": 0,
[2025-04-19 13:39:21]     "exeErrorDiag": "",
[2025-04-19 13:39:21]     "pilotErrorCode": 0,
[2025-04-19 13:39:21]     "pilotErrorDiag": "",
[2025-04-19 13:39:21]  *** Listing of results directory ***
[2025-04-19 13:39:21] insgesamt 412696
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc    495897 18. Apr 10:46 pilot3.tar.gz
[2025-04-19 13:39:21] -rwx------ 1 boinc boinc     37140 18. Apr 11:06 runpilot2-wrapper.sh
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc      5111 18. Apr 11:06 queuedata.json
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc       100 19. Apr 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 13:39:21] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 11:55 run_atlas
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc       105 19. Apr 11:55 job.xml
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc 225271162 19. Apr 11:55 EVNT.44075481._002611.pool.root.1
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc     17569 19. Apr 11:55 start_atlas.sh
[2025-04-19 13:39:21] drwxrwx--x 2 boinc boinc      4096 19. Apr 11:55 shared
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc    508891 19. Apr 11:55 input.tar.gz
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc      6946 19. Apr 11:55 init_data.xml
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc         0 19. Apr 11:55 boinc_lockfile
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc      2578 19. Apr 11:55 pandaJob.out
[2025-04-19 13:39:21] -rw------- 1 boinc boinc       461 19. Apr 11:55 setup.sh.local
[2025-04-19 13:39:21] -rw------- 1 boinc boinc    991300 19. Apr 11:55 agis_schedconf.cvmfs.json
[2025-04-19 13:39:21] -rw------- 1 boinc boinc   1618536 19. Apr 11:55 agis_ddmendpoints.agis.ALL.json
[2025-04-19 13:39:21] drwx------ 4 boinc boinc      4096 19. Apr 11:55 pilot3
[2025-04-19 13:39:21] -rw------- 1 boinc boinc 191762348 19. Apr 13:38 HITS.44075483._067178.pool.root.1
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc       530 19. Apr 13:38 boinc_task_state.xml
[2025-04-19 13:39:21] -rw------- 1 boinc boinc      1014 19. Apr 13:38 memory_monitor_summary.json
[2025-04-19 13:39:21] -rw------- 1 boinc boinc    244088 19. Apr 13:38 log.44075483._067178.job.log.tgz.1
[2025-04-19 13:39:21] -rw------- 1 boinc boinc        95 19. Apr 13:39 pilot_heartbeat.json
[2025-04-19 13:39:21] -rw------- 1 boinc boinc      7634 19. Apr 13:39 heartbeat.json
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc        27 19. Apr 13:39 wrapper_checkpoint.txt
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc      8192 19. Apr 13:39 boinc_mmap_file
[2025-04-19 13:39:21] -rw------- 1 boinc boinc      4426 19. Apr 13:39 pilotlog.txt
[2025-04-19 13:39:21] -rw------- 1 boinc boinc    603590 19. Apr 13:39 log.44075483._067178.job.log.1
[2025-04-19 13:39:21] -rw------- 1 boinc boinc       357 19. Apr 13:39 output.list
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc       620 19. Apr 13:39 runtime_log
[2025-04-19 13:39:21] -rw------- 1 boinc boinc    870400 19. Apr 13:39 result.tar.gz
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc     11355 19. Apr 13:39 runtime_log.err
[2025-04-19 13:39:21] -rw------- 1 boinc boinc       642 19. Apr 13:39 FGHKDmJrwP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyy4KDmWXk6Jm.diag
[2025-04-19 13:39:21] -rw-r--r-- 1 boinc boinc     20495 19. Apr 13:39 stderr.txt
[2025-04-19 13:39:21] HITS file was successfully produced:
[2025-04-19 13:39:21] -rw------- 1 boinc boinc 191762348 19. Apr 13:38 shared/HITS.pool.root.1
[2025-04-19 13:39:21]  *** Contents of shared directory: ***
[2025-04-19 13:39:21] insgesamt 408640
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc 225271162 19. Apr 11:55 ATLAS.root_0
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc     17569 19. Apr 11:55 start_atlas.sh
[2025-04-19 13:39:21] -rw-r--r-- 2 boinc boinc    508891 19. Apr 11:55 input.tar.gz
[2025-04-19 13:39:21] -rw------- 1 boinc boinc 191762348 19. Apr 13:38 HITS.pool.root.1
[2025-04-19 13:39:21] -rw------- 1 boinc boinc    870400 19. Apr 13:39 result.tar.gz
13:39:23 (1335745): run_atlas exited; CPU time 23143.639933
13:39:23 (1335745): called boinc_finish(0)

</stderr_txt>
]]>

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