Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
13:26:44 (1410585): wrapper (7.7.26015): starting
13:26:44 (1410585): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 13:26:44] Arguments: --nthreads 4
[2025-04-19 13:26:44] Threads: 4
[2025-04-19 13:26:44] Checking for CVMFS
[2025-04-19 13:26:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 13:26:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 13:26:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 13:26:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 13:26:44] 2.12.7.0 14133 1626 97436 145037 3 56 5394118 6144000 1832 130560 0 3865664 99.9969 396601 12037 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-04-19 13:26:44] CVMFS is ok
[2025-04-19 13:26:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 13:26:44] Checking for apptainer binary...
[2025-04-19 13:26:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 13:26:44] Running /usr/bin/apptainer --version
[2025-04-19 13:26:44] apptainer version 1.4.0
[2025-04-19 13:26:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 13:26:44] Ryzen5
[2025-04-19 13:26:44] apptainer works
[2025-04-19 13:26:44] Set ATHENA_PROC_NUMBER=4
[2025-04-19 13:26:44] Set ATHENA_CORE_NUMBER=4
[2025-04-19 13:26:44] Starting ATLAS job with PandaID=6606293788
[2025-04-19 13:26:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 15:07:16]  *** The last 200 lines of the pilot log: ***
[2025-04-19 15:07:16]  guid=99daf3fb-4521-4305-9ae9-0b34bff03dee
[2025-04-19 15:07:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 15:07:16]  is_altstaged=None
[2025-04-19 15:07:16]  is_tar=False
[2025-04-19 15:07:16]  lfn=log.44075483._067114.job.log.tgz.1
[2025-04-19 15:07:16]  mtime=0
[2025-04-19 15:07:16]  protocol_id=None
[2025-04-19 15:07:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 15:07:16]  replicas=None
[2025-04-19 15:07:16]  scope=mc23_13p6TeV
[2025-04-19 15:07:16]  status=None
[2025-04-19 15:07:16]  status_code=0
[2025-04-19 15:07:16]  storage_token=
[2025-04-19 15:07:16]  surl=/var/lib/boinc3/slots/0/PanDA_Pilot-6606293788/log.44075483._067114.job.log.tgz.1
[2025-04-19 15:07:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/93/log.44075483._067114.job.log.tgz.1
[2025-04-19 15:07:16]  workdir=None
[2025-04-19 15:07:16] ]
[2025-04-19 15:07:16] 2025-04-19 13:06:51,596 | INFO     | transferring file log.44075483._067114.job.log.tgz.1 from /var/lib/boinc3/slots/0/PanDA_Pilot-6606293788/log.44075483._067114.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-04-19 15:07:16] 2025-04-19 13:06:51,596 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/0/PanDA_Pilot-6606293788/log.44075483._067114.job.log.tgz.1 /var/lib/boinc3/slots/0/log.44075483._067114.j
[2025-04-19 15:07:16] 2025-04-19 13:06:51,604 | INFO     | adding to output.list: log.44075483._067114.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/93/log.44075483._067114.job.log.tg
[2025-04-19 15:07:16] 2025-04-19 13:06:51,605 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 15:07:16] 2025-04-19 13:06:51,605 | INFO     | summary of transferred files:
[2025-04-19 15:07:16] 2025-04-19 13:06:51,605 | INFO     |  -- lfn=log.44075483._067114.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 15:07:16] 2025-04-19 13:06:51,605 | INFO     | stage-out finished correctly
[2025-04-19 15:07:16] 2025-04-19 13:06:52,498 | WARNING  | process 1420821 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 15:07:16] 2025-04-19 13:06:52,498 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6606293788/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 15:07:16] 2025-04-19 13:06:52,541 | INFO     | number of running child processes to parent process 1420821: 1
[2025-04-19 15:07:16] 2025-04-19 13:06:52,541 | INFO     | maximum number of monitored processes: 6
[2025-04-19 15:07:16] 2025-04-19 13:06:53,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 15:07:16] 2025-04-19 13:06:54,290 | INFO     | job 6606293788 has state=finished
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | preparing for final server update for job 6606293788 in state='finished'
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | this job has now completed (state=finished)
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | log transfer has been attempted: DONE
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | job 6606293788 has finished - writing final server update
[2025-04-19 15:07:16] 2025-04-19 13:06:54,291 | INFO     | total number of processed events: 400 (read)
[2025-04-19 15:07:16] 2025-04-19 13:06:54,292 | INFO     | executing command: lscpu
[2025-04-19 15:07:16] 2025-04-19 13:06:54,304 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 15:07:16] 2025-04-19 13:06:55,042 | INFO     | monitor loop #450: job 0:6606293788 is in state 'finished'
[2025-04-19 15:07:16] 2025-04-19 13:06:55,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6606293788/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | INFO     | extracted standard info from prmon json
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 15:07:16] 2025-04-19 13:06:55,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 15:07:16] 2025-04-19 13:06:55,951 | INFO     | fitting pss+swap vs Time
[2025-04-19 15:07:16] 2025-04-19 13:06:55,951 | INFO     | sum of square deviations: 241429643.0
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | sum of deviations: -18165849318.5
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | mean x: 1745065110.5
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | mean y: 2490238.945652174
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | -- intersect: 131306125759.43787
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | intersect: 131306125759.43787
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | chi2: 0.08883848494962188
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | -- intersect: 131306125759.43787
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | current memory leak: -75.24 B/s (using 92 data points, chi2=0.09)
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | ..............................
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . Timing measurements:
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . get job = 0 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . initial setup = 1 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . payload setup = 3 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . stage-in = 0 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . payload execution = 5981 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . stage-out = 0 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | . log creation = 0 s
[2025-04-19 15:07:16] 2025-04-19 13:06:55,952 | INFO     | ..............................
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | 
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | job summary report
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | --------------------------------------------------
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | PanDA job id: 6606293788
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | task id: 44075483
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | errors: (none)
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | pilot state: finished 
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | transexitcode: 0
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | exeerrorcode: 0
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | exeerrordiag: 
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | exitcode: 0
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | exitmsg: OK
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | cpuconsumptiontime: 22467 s
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | nevents: 400
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | neventsw: 0
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | pid: 1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | pgrp: 1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | corecount: 4
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | event service: False
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | sizes: {0: 2426603, 1: 2426802, 3: 2427008, 11: 2427036, 5988: 2462683, 5990: 2462683, 5992: 2462981}
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | --------------------------------------------------
[2025-04-19 15:07:16] 2025-04-19 13:06:56,168 | INFO     | 
[2025-04-19 15:07:16] 2025-04-19 13:06:56,169 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | job 6606293788 has completed (purged errors)
[2025-04-19 15:07:16] 2025-04-19 13:06:56,179 | INFO     | overall cleanup function is called
[2025-04-19 15:07:16] 2025-04-19 13:06:57,184 | INFO     | --- collectZombieJob: --- 10, [1420821]
[2025-04-19 15:07:16] 2025-04-19 13:06:57,185 | INFO     | zombie collector waiting for pid 1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:57,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 15:07:16] 2025-04-19 13:06:57,185 | INFO     | collected zombie processes
[2025-04-19 15:07:16] 2025-04-19 13:06:57,185 | INFO     | will attempt to kill all subprocesses of pid=1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:57,228 | INFO     | process IDs to be killed: [1420821] (in reverse order)
[2025-04-19 15:07:16] 2025-04-19 13:06:57,249 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 15:07:16] 2025-04-19 13:06:57,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 15:07:16] 2025-04-19 13:06:57,251 | INFO     | did not find any defunct processes belonging to 1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:57,252 | INFO     | did not find any defunct processes belonging to 1420821
[2025-04-19 15:07:16] 2025-04-19 13:06:57,252 | INFO     | ready for new job
[2025-04-19 15:07:16] 2025-04-19 13:06:57,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 15:07:16] 2025-04-19 13:06:57,253 | INFO     | **************************************
[2025-04-19 15:07:16] 2025-04-19 13:06:57,253 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 15:07:16] 2025-04-19 13:06:57,253 | INFO     | **************************************
[2025-04-19 15:07:16] 2025-04-19 13:06:57,253 | INFO     | 
[2025-04-19 15:07:16] 2025-04-19 13:06:57,254 | INFO     | architecture information:
[2025-04-19 15:07:16] 2025-04-19 13:06:57,254 | INFO     | executing command: cat /etc/os-release
[2025-04-19 15:07:16] 2025-04-19 13:06:57,261 | INFO     | cat /etc/os-release:
[2025-04-19 15:07:16] NAME="CentOS Linux"
[2025-04-19 15:07:16] VERSION="7 (Core)"
[2025-04-19 15:07:16] ID="centos"
[2025-04-19 15:07:16] ID_LIKE="rhel fedora"
[2025-04-19 15:07:16] VERSION_ID="7"
[2025-04-19 15:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 15:07:16] ANSI_COLOR="0;31"
[2025-04-19 15:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 15:07:16] HOME_URL="https://www.centos.org/"
[2025-04-19 15:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 15:07:16] 
[2025-04-19 15:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 15:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 15:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 15:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 15:07:16] 
[2025-04-19 15:07:16] 2025-04-19 13:06:57,261 | INFO     | **************************************
[2025-04-19 15:07:16] 2025-04-19 13:06:57,764 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | INFO     | sufficient remaining disk space (85434826752 B)
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | INFO     | update_server=False
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:07:16] 2025-04-19 13:06:57,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 15:07:16] 2025-04-19 13:06:58,177 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 15:07:16] 2025-04-19 13:06:58,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 15:07:16] 2025-04-19 13:06:58,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 15:07:16] 2025-04-19 13:06:58,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:07:16] 2025-04-19 13:06:58,550 | INFO     | aborting loop
[2025-04-19 15:07:16] 2025-04-19 13:06:58,624 | INFO     | all payload control threads have been joined
[2025-04-19 15:07:16] 2025-04-19 13:06:58,742 | INFO     | all data control threads have been joined
[2025-04-19 15:07:16] 2025-04-19 13:06:58,777 | INFO     | [job] retrieve thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:58,777 | INFO     | [job] queue monitor thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,027 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,112 | INFO     | all job control threads have been joined
[2025-04-19 15:07:16] 2025-04-19 13:06:59,133 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,555 | INFO     | [job] job monitor thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,629 | INFO     | [payload] control thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 15:07:16] 2025-04-19 13:06:59,747 | INFO     | [data] control thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,772 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,775 | INFO     | [data] copytool_out thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:06:59,847 | INFO     | [payload] failed_post thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:00,035 | INFO     | [data] copytool_in thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:00,117 | INFO     | [job] control thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:00,273 | INFO     | [job] validate thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:00,371 | INFO     | [payload] validate_post thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:03,727 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:08,824 | INFO     | job.realtimelogging is not enabled
[2025-04-19 15:07:16] 2025-04-19 13:07:09,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 15:07:16] 2025-04-19 13:07:11,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137622627338048)>', '<ExcThread(monitor, started 137622127097600)>']
[2025-04-19 15:07:16] 2025-04-19 13:07:11,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 15:07:16] 2025-04-19 13:07:11,240 | INFO     | [monitor] control thread has ended
[2025-04-19 15:07:16] 2025-04-19 13:07:16,174 | INFO     | all workflow threads have been joined
[2025-04-19 15:07:16] 2025-04-19 13:07:16,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 15:07:16] 2025-04-19 13:07:16,174 | INFO     | traces error code: 0
[2025-04-19 15:07:16] 2025-04-19 13:07:16,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 15:07:16] 2025-04-19 13:07:16,217 [wrapper] ==== pilot stdout END ====
[2025-04-19 15:07:16] 2025-04-19 13:07:16,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 15:07:16] 2025-04-19 13:07:16,219 [wrapper] pilotpid: 1414288
[2025-04-19 15:07:16] 2025-04-19 13:07:16,221 [wrapper] Pilot exit status: 0
[2025-04-19 15:07:16] 2025-04-19 13:07:16,226 [wrapper] pandaids: 6606293788
[2025-04-19 15:07:16] 2025-04-19 13:07:16,240 [wrapper] cleanup supervisor_pilot 1481659 1414289
[2025-04-19 15:07:16] 2025-04-19 13:07:16,241 [wrapper] Test setup, not cleaning
[2025-04-19 15:07:16] 2025-04-19 13:07:16,242 [wrapper] apfmon messages muted
[2025-04-19 15:07:16] 2025-04-19 13:07:16,244 [wrapper] ==== wrapper stdout END ====
[2025-04-19 15:07:16] 2025-04-19 13:07:16,245 [wrapper] ==== wrapper stderr END ====
[2025-04-19 15:07:16]  *** Error codes and diagnostics ***
[2025-04-19 15:07:16]     "exeErrorCode": 0,
[2025-04-19 15:07:16]     "exeErrorDiag": "",
[2025-04-19 15:07:16]     "pilotErrorCode": 0,
[2025-04-19 15:07:16]     "pilotErrorDiag": "",
[2025-04-19 15:07:16]  *** Listing of results directory ***
[2025-04-19 15:07:16] insgesamt 405700
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc    495897 18. Apr 10:46 pilot3.tar.gz
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc      5111 18. Apr 10:54 queuedata.json
[2025-04-19 15:07:16] -rwx------ 1 boinc boinc     37140 18. Apr 10:57 runpilot2-wrapper.sh
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc       100 19. Apr 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 15:07:16] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 13:26 run_atlas
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc       105 19. Apr 13:26 job.xml
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc      6944 19. Apr 13:26 init_data.xml
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc 222254975 19. Apr 13:26 EVNT.44075481._002608.pool.root.1
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc     17569 19. Apr 13:26 start_atlas.sh
[2025-04-19 15:07:16] drwxrwx--x 2 boinc boinc      4096 19. Apr 13:26 shared
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc    508894 19. Apr 13:26 input.tar.gz
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc         0 19. Apr 13:26 boinc_lockfile
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc      2578 19. Apr 13:26 pandaJob.out
[2025-04-19 15:07:16] -rw------- 1 boinc boinc       461 19. Apr 13:26 setup.sh.local
[2025-04-19 15:07:16] -rw------- 1 boinc boinc    991292 19. Apr 13:26 agis_schedconf.cvmfs.json
[2025-04-19 15:07:16] -rw------- 1 boinc boinc   1618536 19. Apr 13:26 agis_ddmendpoints.agis.ALL.json
[2025-04-19 15:07:16] drwx------ 4 boinc boinc      4096 19. Apr 13:26 pilot3
[2025-04-19 15:07:16] -rw------- 1 boinc boinc 187631932 19. Apr 15:06 HITS.44075483._067114.pool.root.1
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc       530 19. Apr 15:06 boinc_task_state.xml
[2025-04-19 15:07:16] -rw------- 1 boinc boinc        95 19. Apr 15:06 pilot_heartbeat.json
[2025-04-19 15:07:16] -rw------- 1 boinc boinc      1016 19. Apr 15:06 memory_monitor_summary.json
[2025-04-19 15:07:16] -rw------- 1 boinc boinc    257189 19. Apr 15:06 log.44075483._067114.job.log.tgz.1
[2025-04-19 15:07:16] -rw------- 1 boinc boinc      7640 19. Apr 15:06 heartbeat.json
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc      8192 19. Apr 15:07 boinc_mmap_file
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc        27 19. Apr 15:07 wrapper_checkpoint.txt
[2025-04-19 15:07:16] -rw------- 1 boinc boinc      4426 19. Apr 15:07 pilotlog.txt
[2025-04-19 15:07:16] -rw------- 1 boinc boinc    584889 19. Apr 15:07 log.44075483._067114.job.log.1
[2025-04-19 15:07:16] -rw------- 1 boinc boinc       357 19. Apr 15:07 output.list
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc       620 19. Apr 15:07 runtime_log
[2025-04-19 15:07:16] -rw------- 1 boinc boinc    860160 19. Apr 15:07 result.tar.gz
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc     11355 19. Apr 15:07 runtime_log.err
[2025-04-19 15:07:16] -rw------- 1 boinc boinc       642 19. Apr 15:07 dvWLDmwiwP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmqy4KDmSa9Cyn.diag
[2025-04-19 15:07:16] -rw-r--r-- 1 boinc boinc     20961 19. Apr 15:07 stderr.txt
[2025-04-19 15:07:16] HITS file was successfully produced:
[2025-04-19 15:07:16] -rw------- 1 boinc boinc 187631932 19. Apr 15:06 shared/HITS.pool.root.1
[2025-04-19 15:07:16]  *** Contents of shared directory: ***
[2025-04-19 15:07:16] insgesamt 401652
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc 222254975 19. Apr 13:26 ATLAS.root_0
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc     17569 19. Apr 13:26 start_atlas.sh
[2025-04-19 15:07:16] -rw-r--r-- 2 boinc boinc    508894 19. Apr 13:26 input.tar.gz
[2025-04-19 15:07:16] -rw------- 1 boinc boinc 187631932 19. Apr 15:06 HITS.pool.root.1
[2025-04-19 15:07:16] -rw------- 1 boinc boinc    860160 19. Apr 15:07 result.tar.gz
15:07:17 (1410585): run_atlas exited; CPU time 22522.172025
15:07:17 (1410585): called boinc_finish(0)

</stderr_txt>
]]>

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