Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
15:07:20 (1507410): wrapper (7.7.26015): starting
15:07:20 (1507410): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 15:07:20] Arguments: --nthreads 4
[2025-04-19 15:07:20] Threads: 4
[2025-04-19 15:07:20] Checking for CVMFS
[2025-04-19 15:07:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 15:07:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 15:07:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 15:07:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 15:07:20] 2.12.7.0 14133 1727 103004 145038 2 235 3139424 6144001 1669 130560 0 4137495 99.8988 717541 1787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-04-19 15:07:20] CVMFS is ok
[2025-04-19 15:07:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 15:07:20] Checking for apptainer binary...
[2025-04-19 15:07:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 15:07:20] Running /usr/bin/apptainer --version
[2025-04-19 15:07:20] apptainer version 1.4.0
[2025-04-19 15:07:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 15:07:20] Ryzen5
[2025-04-19 15:07:20] apptainer works
[2025-04-19 15:07:20] Set ATHENA_PROC_NUMBER=4
[2025-04-19 15:07:20] Set ATHENA_CORE_NUMBER=4
[2025-04-19 15:07:20] Starting ATLAS job with PandaID=6604571167
[2025-04-19 15:07:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 16:50:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 16:50:40] 2025-04-19 14:50:28,593 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6604571167/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,594 | INFO     | extracted standard info from prmon json
[2025-04-19 16:50:40] 2025-04-19 14:50:28,594 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 16:50:40] 2025-04-19 14:50:28,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 16:50:40] 2025-04-19 14:50:28,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 16:50:40] 2025-04-19 14:50:28,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | fitting pss+swap vs Time
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | sum of square deviations: 319447850.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | sum of deviations: 18440780923.999996
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | mean x: 1745071111.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | mean y: 2302077.3465346536
[2025-04-19 16:50:40] 2025-04-19 14:50:28,596 | INFO     | -- intersect: -100735499271.92622
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | intersect: -100735499271.92622
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | chi2: 1.7651980084759518
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | sum of square deviations: 274312120.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | sum of deviations: 17374821570.5
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | mean x: 1745070958.5
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | mean y: 2298472.96875
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | -- intersect: -110529808281.18747
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | intersect: -110529808281.18747
[2025-04-19 16:50:40] 2025-04-19 14:50:28,597 | INFO     | chi2: 1.7678797401573911
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | current chi2=1.7678797401573911 (change=-0.15192242845066095 %)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | right removable region: 95
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | sum of square deviations: 274312120.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | sum of deviations: 590223495.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | mean x: 1745071263.5
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | mean y: 2361561.4375
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | -- intersect: -3752419890.3154736
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | intersect: -3752419890.3154736
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | chi2: 0.005655079693361766
[2025-04-19 16:50:40] 2025-04-19 14:50:28,598 | INFO     | current chi2=0.005655079693361766 (change=99.6796348247501 %)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | sum of square deviations: 233641590.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | sum of deviations: 622953777.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | mean x: 1745071416.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | mean y: 2361496.8571428573
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | -- intersect: -4650486610.07424
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | intersect: -4650486610.07424
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | chi2: 0.0016631592716000068
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | current chi2=0.0016631592716000068 (change=70.58999409765502 %)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,599 | INFO     | sum of square deviations: 197203697.5
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | sum of deviations: 390829318.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | mean x: 1745071568.5
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | mean y: 2362459.976744186
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | -- intersect: -3456117982.450281
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | intersect: -3456117982.450281
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | chi2: 0.0015249218904280942
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | current chi2=0.0015249218904280942 (change=8.311734392035968 %)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | left removable region: 30
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | sum of square deviations: 85136480.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | sum of deviations: 394419534.00000006
[2025-04-19 16:50:40] 2025-04-19 14:50:28,600 | INFO     | mean x: 1745071843.0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | mean y: 2361175.815384615
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | -- intersect: -8082192274.275354
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | intersect: -8082192274.275354
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | chi2: 0.0007721365369364574
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | -- intersect: -8082192274.275354
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | current memory leak: 4.63 B/s (using 65 data points, chi2=0.00)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | ..............................
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . Timing measurements:
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . get job = 0 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . initial setup = 0 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . payload setup = 2 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . stage-in = 0 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,601 | INFO     | . payload execution = 6156 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,602 | INFO     | . stage-out = 0 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,602 | INFO     | . log creation = 0 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,602 | INFO     | ..............................
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | 
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | job summary report
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | --------------------------------------------------
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | PanDA job id: 6604571167
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | task id: 44075483
[2025-04-19 16:50:40] 2025-04-19 14:50:28,669 | INFO     | errors: (none)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | pilot state: finished 
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | transexitcode: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | exeerrorcode: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | exeerrordiag: 
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | exitcode: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | exitmsg: OK
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | cpuconsumptiontime: 22936 s
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | nevents: 400
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | neventsw: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | pid: 1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | pgrp: 1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | corecount: 4
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | event service: False
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | sizes: {0: 2426825, 2: 2427031, 11: 2427059, 6163: 2453975, 6165: 2462918, 6168: 2462974, 6172: 2463272}
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | --------------------------------------------------
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | 
[2025-04-19 16:50:40] 2025-04-19 14:50:28,670 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-04-19 16:50:40] 2025-04-19 14:50:28,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 16:50:40] 2025-04-19 14:50:28,687 | INFO     | job 6604571167 has completed (purged errors)
[2025-04-19 16:50:40] 2025-04-19 14:50:28,687 | INFO     | overall cleanup function is called
[2025-04-19 16:50:40] 2025-04-19 14:50:29,694 | INFO     | --- collectZombieJob: --- 10, [1517691]
[2025-04-19 16:50:40] 2025-04-19 14:50:29,694 | INFO     | zombie collector waiting for pid 1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:29,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 16:50:40] 2025-04-19 14:50:29,694 | INFO     | collected zombie processes
[2025-04-19 16:50:40] 2025-04-19 14:50:29,694 | INFO     | will attempt to kill all subprocesses of pid=1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:29,775 | INFO     | process IDs to be killed: [1517691] (in reverse order)
[2025-04-19 16:50:40] 2025-04-19 14:50:29,808 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 16:50:40] 2025-04-19 14:50:29,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 16:50:40] 2025-04-19 14:50:29,810 | INFO     | did not find any defunct processes belonging to 1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:29,813 | INFO     | did not find any defunct processes belonging to 1517691
[2025-04-19 16:50:40] 2025-04-19 14:50:29,813 | INFO     | ready for new job
[2025-04-19 16:50:40] 2025-04-19 14:50:29,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 16:50:40] 2025-04-19 14:50:29,814 | INFO     | **************************************
[2025-04-19 16:50:40] 2025-04-19 14:50:29,814 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 16:50:40] 2025-04-19 14:50:29,814 | INFO     | **************************************
[2025-04-19 16:50:40] 2025-04-19 14:50:29,814 | INFO     | 
[2025-04-19 16:50:40] 2025-04-19 14:50:29,815 | INFO     | architecture information:
[2025-04-19 16:50:40] 2025-04-19 14:50:29,815 | INFO     | executing command: cat /etc/os-release
[2025-04-19 16:50:40] 2025-04-19 14:50:29,826 | INFO     | cat /etc/os-release:
[2025-04-19 16:50:40] NAME="CentOS Linux"
[2025-04-19 16:50:40] VERSION="7 (Core)"
[2025-04-19 16:50:40] ID="centos"
[2025-04-19 16:50:40] ID_LIKE="rhel fedora"
[2025-04-19 16:50:40] VERSION_ID="7"
[2025-04-19 16:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 16:50:40] ANSI_COLOR="0;31"
[2025-04-19 16:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 16:50:40] HOME_URL="https://www.centos.org/"
[2025-04-19 16:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 16:50:40] 
[2025-04-19 16:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 16:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 16:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 16:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 16:50:40] 
[2025-04-19 16:50:40] 2025-04-19 14:50:29,826 | INFO     | **************************************
[2025-04-19 16:50:40] 2025-04-19 14:50:30,328 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-04-19 16:50:40] 2025-04-19 14:50:30,339 | INFO     | sufficient remaining disk space (85735768064 B)
[2025-04-19 16:50:40] 2025-04-19 14:50:30,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | INFO     | update_server=False
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | INFO     | aborting loop
[2025-04-19 16:50:40] 2025-04-19 14:50:30,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:50:40] 2025-04-19 14:50:30,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 16:50:40] 2025-04-19 14:50:30,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 16:50:40] 2025-04-19 14:50:30,527 | INFO     | all data control threads have been joined
[2025-04-19 16:50:40] 2025-04-19 14:50:31,154 | INFO     | all payload control threads have been joined
[2025-04-19 16:50:40] 2025-04-19 14:50:31,345 | INFO     | [job] job monitor thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,345 | INFO     | [job] retrieve thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,345 | INFO     | [job] queue monitor thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,528 | INFO     | [data] control thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,710 | INFO     | [payload] validate_post thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:31,840 | INFO     | all job control threads have been joined
[2025-04-19 16:50:40] 2025-04-19 14:50:32,155 | INFO     | [payload] control thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,345 | INFO     | [job] validate thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,346 | INFO     | [data] copytool_out thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,441 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,458 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,533 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,629 | INFO     | [data] copytool_in thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,707 | INFO     | [payload] failed_post thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:32,845 | INFO     | [job] control thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:34,418 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 16:50:40] 2025-04-19 14:50:35,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132877638006592)>', '<ExcThread(monitor, started 132877152937728)>']
[2025-04-19 16:50:40] 2025-04-19 14:50:36,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 16:50:40] 2025-04-19 14:50:36,365 | INFO     | [monitor] control thread has ended
[2025-04-19 16:50:40] 2025-04-19 14:50:40,467 | INFO     | all workflow threads have been joined
[2025-04-19 16:50:40] 2025-04-19 14:50:40,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 16:50:40] 2025-04-19 14:50:40,467 | INFO     | traces error code: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:40,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 16:50:40] 2025-04-19 14:50:40,542 [wrapper] ==== pilot stdout END ====
[2025-04-19 16:50:40] 2025-04-19 14:50:40,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 16:50:40] 2025-04-19 14:50:40,545 [wrapper] pilotpid: 1511134
[2025-04-19 16:50:40] 2025-04-19 14:50:40,547 [wrapper] Pilot exit status: 0
[2025-04-19 16:50:40] 2025-04-19 14:50:40,553 [wrapper] pandaids: 6604571167
[2025-04-19 16:50:40] 2025-04-19 14:50:40,576 [wrapper] cleanup supervisor_pilot 1577211 1511135
[2025-04-19 16:50:40] 2025-04-19 14:50:40,577 [wrapper] Test setup, not cleaning
[2025-04-19 16:50:40] 2025-04-19 14:50:40,579 [wrapper] apfmon messages muted
[2025-04-19 16:50:40] 2025-04-19 14:50:40,581 [wrapper] ==== wrapper stdout END ====
[2025-04-19 16:50:40] 2025-04-19 14:50:40,582 [wrapper] ==== wrapper stderr END ====
[2025-04-19 16:50:40]  *** Error codes and diagnostics ***
[2025-04-19 16:50:40]     "exeErrorCode": 0,
[2025-04-19 16:50:40]     "exeErrorDiag": "",
[2025-04-19 16:50:40]     "pilotErrorCode": 0,
[2025-04-19 16:50:40]     "pilotErrorDiag": "",
[2025-04-19 16:50:40]  *** Listing of results directory ***
[2025-04-19 16:50:40] insgesamt 411656
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc    495897 16. Apr 23:20 pilot3.tar.gz
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc      5111 16. Apr 23:32 queuedata.json
[2025-04-19 16:50:40] -rwx------ 1 boinc boinc     37140 16. Apr 23:34 runpilot2-wrapper.sh
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc       100 19. Apr 15:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 16:50:40] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 15:07 run_atlas
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc       105 19. Apr 15:07 job.xml
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc     17569 19. Apr 15:07 start_atlas.sh
[2025-04-19 16:50:40] drwxrwx--x 2 boinc boinc      4096 19. Apr 15:07 shared
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc    508894 19. Apr 15:07 input.tar.gz
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc      6944 19. Apr 15:07 init_data.xml
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc 225437963 19. Apr 15:07 EVNT.44075481._001798.pool.root.1
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc         0 19. Apr 15:07 boinc_lockfile
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc      2579 19. Apr 15:07 pandaJob.out
[2025-04-19 16:50:40] -rw------- 1 boinc boinc       461 19. Apr 15:07 setup.sh.local
[2025-04-19 16:50:40] -rw------- 1 boinc boinc    991292 19. Apr 15:07 agis_schedconf.cvmfs.json
[2025-04-19 16:50:40] -rw------- 1 boinc boinc   1618536 19. Apr 15:07 agis_ddmendpoints.agis.ALL.json
[2025-04-19 16:50:40] drwx------ 4 boinc boinc      4096 19. Apr 15:07 pilot3
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc       529 19. Apr 16:49 boinc_task_state.xml
[2025-04-19 16:50:40] -rw------- 1 boinc boinc 190479538 19. Apr 16:49 HITS.44075483._046001.pool.root.1
[2025-04-19 16:50:40] -rw------- 1 boinc boinc      1011 19. Apr 16:50 memory_monitor_summary.json
[2025-04-19 16:50:40] -rw------- 1 boinc boinc    273610 19. Apr 16:50 log.44075483._046001.job.log.tgz.1
[2025-04-19 16:50:40] -rw------- 1 boinc boinc        95 19. Apr 16:50 pilot_heartbeat.json
[2025-04-19 16:50:40] -rw------- 1 boinc boinc      7632 19. Apr 16:50 heartbeat.json
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc        27 19. Apr 16:50 wrapper_checkpoint.txt
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc      8192 19. Apr 16:50 boinc_mmap_file
[2025-04-19 16:50:40] -rw------- 1 boinc boinc      4477 19. Apr 16:50 pilotlog.txt
[2025-04-19 16:50:40] -rw------- 1 boinc boinc    602992 19. Apr 16:50 log.44075483._046001.job.log.1
[2025-04-19 16:50:40] -rw------- 1 boinc boinc       357 19. Apr 16:50 output.list
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc       620 19. Apr 16:50 runtime_log
[2025-04-19 16:50:40] -rw------- 1 boinc boinc    890880 19. Apr 16:50 result.tar.gz
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc     11355 19. Apr 16:50 runtime_log.err
[2025-04-19 16:50:40] -rw------- 1 boinc boinc       642 19. Apr 16:50 DlxNDmmZPP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmf92KDmar0dVm.diag
[2025-04-19 16:50:40] -rw-r--r-- 1 boinc boinc     20521 19. Apr 16:50 stderr.txt
[2025-04-19 16:50:40] HITS file was successfully produced:
[2025-04-19 16:50:40] -rw------- 1 boinc boinc 190479538 19. Apr 16:49 shared/HITS.pool.root.1
[2025-04-19 16:50:40]  *** Contents of shared directory: ***
[2025-04-19 16:50:40] insgesamt 407572
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc     17569 19. Apr 15:07 start_atlas.sh
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc    508894 19. Apr 15:07 input.tar.gz
[2025-04-19 16:50:40] -rw-r--r-- 2 boinc boinc 225437963 19. Apr 15:07 ATLAS.root_0
[2025-04-19 16:50:40] -rw------- 1 boinc boinc 190479538 19. Apr 16:49 HITS.pool.root.1
[2025-04-19 16:50:40] -rw------- 1 boinc boinc    890880 19. Apr 16:50 result.tar.gz
16:50:42 (1507410): run_atlas exited; CPU time 22993.451248
16:50:42 (1507410): called boinc_finish(0)

</stderr_txt>
]]>

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