Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:58 (18881): wrapper (7.7.26015): starting
07:39:58 (18881): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 07:39:58] Arguments: --nthreads 12
[2025-04-18 07:39:58] Threads: 12
[2025-04-18 07:39:58] Checking for CVMFS
[2025-04-18 07:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 07:39:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 07:39:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 07:39:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 07:39:58] 2.11.2.0 10300 367208 168652 145001 1 56 19326835 20275200 1 130560 0 23901295 99.971 7682378 46001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 07:39:58] CVMFS is ok
[2025-04-18 07:39:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 07:39:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 07:39:58] Further information can be found at the LHC@home message board.
[2025-04-18 07:39:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 07:39:58] Checking for apptainer binary...
[2025-04-18 07:39:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 07:39:58] Running /usr/bin/apptainer --version
[2025-04-18 07:39:58] apptainer version 1.3.2-1.el7
[2025-04-18 07:39:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 07:40:00] c-205-30.aglt2.org
[2025-04-18 07:40:00] apptainer works
[2025-04-18 07:40:00] Set ATHENA_PROC_NUMBER=12
[2025-04-18 07:40:00] Set ATHENA_CORE_NUMBER=12
[2025-04-18 07:40:00] Starting ATLAS job with PandaID=6595666825
[2025-04-18 07:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 09:02:44]  *** The last 200 lines of the pilot log: ***
[2025-04-18 09:02:44]  guid=1a7ef3fa-c27f-4d28-b3e7-a6d1ce8f851d
[2025-04-18 09:02:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 09:02:44]  is_altstaged=None
[2025-04-18 09:02:44]  is_tar=False
[2025-04-18 09:02:44]  lfn=log.44075164._022011.job.log.tgz.1
[2025-04-18 09:02:44]  mtime=0
[2025-04-18 09:02:44]  protocol_id=None
[2025-04-18 09:02:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 09:02:44]  replicas=None
[2025-04-18 09:02:44]  scope=mc23_13p6TeV
[2025-04-18 09:02:44]  status=None
[2025-04-18 09:02:44]  status_code=0
[2025-04-18 09:02:44]  storage_token=
[2025-04-18 09:02:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6595666825/log.44075164._022011.job.log.tgz.1
[2025-04-18 09:02:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e7/log.44075164._022011.job.log.tgz.1
[2025-04-18 09:02:44]  workdir=None
[2025-04-18 09:02:44] ]
[2025-04-18 09:02:44] 2025-04-18 13:02:17,072 | INFO     | transferring file log.44075164._022011.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6595666825/log.44075164._022011.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 09:02:44] 2025-04-18 13:02:17,072 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6595666825/log.44075164._022011.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075164._022011.job
[2025-04-18 09:02:44] 2025-04-18 13:02:17,093 | INFO     | adding to output.list: log.44075164._022011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e7/log.44075164._022011.job.log.tg
[2025-04-18 09:02:44] 2025-04-18 13:02:17,094 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 09:02:44] 2025-04-18 13:02:17,095 | INFO     | summary of transferred files:
[2025-04-18 09:02:44] 2025-04-18 13:02:17,095 | INFO     |  -- lfn=log.44075164._022011.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 09:02:44] 2025-04-18 13:02:17,095 | INFO     | stage-out finished correctly
[2025-04-18 09:02:44] 2025-04-18 13:02:18,617 | INFO     | monitor loop #369: job 0:6595666825 is in state 'finished'
[2025-04-18 09:02:44] 2025-04-18 13:02:18,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:02:44] 2025-04-18 13:02:18,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 09:02:44] 2025-04-18 13:02:19,919 | INFO     | job 6595666825 has state=finished
[2025-04-18 09:02:44] 2025-04-18 13:02:19,919 | INFO     | preparing for final server update for job 6595666825 in state='finished'
[2025-04-18 09:02:44] 2025-04-18 13:02:19,920 | INFO     | this job has now completed (state=finished)
[2025-04-18 09:02:44] 2025-04-18 13:02:19,920 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 09:02:44] 2025-04-18 13:02:19,920 | INFO     | log transfer has been attempted: DONE
[2025-04-18 09:02:44] 2025-04-18 13:02:19,920 | INFO     | job 6595666825 has finished - writing final server update
[2025-04-18 09:02:44] 2025-04-18 13:02:19,921 | INFO     | total number of processed events: 400 (read)
[2025-04-18 09:02:44] 2025-04-18 13:02:19,922 | INFO     | executing command: lscpu
[2025-04-18 09:02:44] 2025-04-18 13:02:19,949 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 09:02:44] 2025-04-18 13:02:21,141 | INFO     | monitor loop #370: job 0:6595666825 is in state 'finished'
[2025-04-18 09:02:44] 2025-04-18 13:02:21,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:02:44] 2025-04-18 13:02:23,644 | INFO     | monitor loop #371: job 0:6595666825 is in state 'finished'
[2025-04-18 09:02:44] 2025-04-18 13:02:23,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,829 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 09:02:44] 2025-04-18 13:02:24,830 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6595666825/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,831 | INFO     | extracted standard info from prmon json
[2025-04-18 09:02:44] 2025-04-18 13:02:24,831 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 09:02:44] 2025-04-18 13:02:24,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 09:02:44] 2025-04-18 13:02:24,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 09:02:44] 2025-04-18 13:02:24,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 09:02:44] 2025-04-18 13:02:24,834 | INFO     | fitting pss+swap vs Time
[2025-04-18 09:02:44] 2025-04-18 13:02:24,835 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 09:02:44] 2025-04-18 13:02:24,835 | INFO     | sum of deviations: 16824895590.500008
[2025-04-18 09:02:44] 2025-04-18 13:02:24,836 | INFO     | mean x: 1744978973.5
[2025-04-18 09:02:44] 2025-04-18 13:02:24,836 | INFO     | mean y: 2605072.9594594594
[2025-04-18 09:02:44] 2025-04-18 13:02:24,836 | INFO     | -- intersect: -233691796678.01495
[2025-04-18 09:02:44] 2025-04-18 13:02:24,836 | INFO     | intersect: -233691796678.01495
[2025-04-18 09:02:44] 2025-04-18 13:02:24,836 | INFO     | chi2: 2.29664169667243
[2025-04-18 09:02:44] 2025-04-18 13:02:24,837 | INFO     | -- intersect: -233691796678.01495
[2025-04-18 09:02:44] 2025-04-18 13:02:24,837 | INFO     | current memory leak: 133.92 B/s (using 74 data points, chi2=2.30)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,837 | INFO     | ..............................
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . Timing measurements:
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . get job = 0 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . initial setup = 2 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . payload setup = 7 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . stage-in = 0 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . payload execution = 4895 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,838 | INFO     | . stage-out = 0 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,839 | INFO     | . log creation = 0 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,839 | INFO     | ..............................
[2025-04-18 09:02:44] 2025-04-18 13:02:24,924 | INFO     | 
[2025-04-18 09:02:44] 2025-04-18 13:02:24,924 | INFO     | job summary report
[2025-04-18 09:02:44] 2025-04-18 13:02:24,924 | INFO     | --------------------------------------------------
[2025-04-18 09:02:44] 2025-04-18 13:02:24,924 | INFO     | PanDA job id: 6595666825
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | task id: 44075164
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | errors: (none)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | pilot state: finished 
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | transexitcode: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:24,925 | INFO     | exeerrorcode: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | exeerrordiag: 
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | exitcode: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | exitmsg: OK
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | cpuconsumptiontime: 45835 s
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | nevents: 400
[2025-04-18 09:02:44] 2025-04-18 13:02:24,926 | INFO     | neventsw: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | pid: 28988
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | pgrp: 28988
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | corecount: 12
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | event service: False
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | sizes: {0: 2426612, 1: 2426811, 6: 2427017, 11: 2427045, 4907: 2453160, 4908: 2462101, 4910: 2462285, 4916: 2462455}
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | --------------------------------------------------
[2025-04-18 09:02:44] 2025-04-18 13:02:24,927 | INFO     | 
[2025-04-18 09:02:44] 2025-04-18 13:02:24,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 09:02:44] 2025-04-18 13:02:24,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 09:02:44] 2025-04-18 13:02:24,957 | INFO     | job 6595666825 has completed (purged errors)
[2025-04-18 09:02:44] 2025-04-18 13:02:24,957 | INFO     | overall cleanup function is called
[2025-04-18 09:02:44] 2025-04-18 13:02:25,965 | INFO     | --- collectZombieJob: --- 10, [28988]
[2025-04-18 09:02:44] 2025-04-18 13:02:25,965 | INFO     | zombie collector waiting for pid 28988
[2025-04-18 09:02:44] 2025-04-18 13:02:25,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 09:02:44] 2025-04-18 13:02:25,966 | INFO     | collected zombie processes
[2025-04-18 09:02:44] 2025-04-18 13:02:25,966 | INFO     | will attempt to kill all subprocesses of pid=28988
[2025-04-18 09:02:44] 2025-04-18 13:02:26,058 | INFO     | process IDs to be killed: [28988] (in reverse order)
[2025-04-18 09:02:44] 2025-04-18 13:02:26,112 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 09:02:44] 2025-04-18 13:02:26,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 09:02:44] 2025-04-18 13:02:26,116 | INFO     | did not find any defunct processes belonging to 28988
[2025-04-18 09:02:44] 2025-04-18 13:02:26,120 | INFO     | did not find any defunct processes belonging to 28988
[2025-04-18 09:02:44] 2025-04-18 13:02:26,120 | INFO     | ready for new job
[2025-04-18 09:02:44] 2025-04-18 13:02:26,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 09:02:44] 2025-04-18 13:02:26,121 | INFO     | **************************************
[2025-04-18 09:02:44] 2025-04-18 13:02:26,121 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 09:02:44] 2025-04-18 13:02:26,121 | INFO     | **************************************
[2025-04-18 09:02:44] 2025-04-18 13:02:26,122 | INFO     | 
[2025-04-18 09:02:44] 2025-04-18 13:02:26,122 | INFO     | architecture information:
[2025-04-18 09:02:44] 2025-04-18 13:02:26,123 | INFO     | executing command: cat /etc/os-release
[2025-04-18 09:02:44] 2025-04-18 13:02:26,135 | INFO     | cat /etc/os-release:
[2025-04-18 09:02:44] NAME="CentOS Linux"
[2025-04-18 09:02:44] VERSION="7 (Core)"
[2025-04-18 09:02:44] ID="centos"
[2025-04-18 09:02:44] ID_LIKE="rhel fedora"
[2025-04-18 09:02:44] VERSION_ID="7"
[2025-04-18 09:02:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 09:02:44] ANSI_COLOR="0;31"
[2025-04-18 09:02:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 09:02:44] HOME_URL="https://www.centos.org/"
[2025-04-18 09:02:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 09:02:44] 
[2025-04-18 09:02:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 09:02:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 09:02:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 09:02:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 09:02:44] 
[2025-04-18 09:02:44] 2025-04-18 13:02:26,136 | INFO     | **************************************
[2025-04-18 09:02:44] 2025-04-18 13:02:26,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 09:02:44] 2025-04-18 13:02:26,655 | INFO     | sufficient remaining disk space (29401022464 B)
[2025-04-18 09:02:44] 2025-04-18 13:02:26,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 09:02:44] 2025-04-18 13:02:26,656 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 09:02:44] 2025-04-18 13:02:26,656 | INFO     | update_server=False
[2025-04-18 09:02:44] 2025-04-18 13:02:26,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 09:02:44] 2025-04-18 13:02:26,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:02:44] 2025-04-18 13:02:26,709 | INFO     | all job control threads have been joined
[2025-04-18 09:02:44] 2025-04-18 13:02:26,999 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 09:02:44] 2025-04-18 13:02:27,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 09:02:44] 2025-04-18 13:02:27,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 09:02:44] 2025-04-18 13:02:27,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:02:44] 2025-04-18 13:02:27,152 | INFO     | aborting loop
[2025-04-18 09:02:44] 2025-04-18 13:02:27,175 | INFO     | all data control threads have been joined
[2025-04-18 09:02:44] 2025-04-18 13:02:27,661 | INFO     | [job] retrieve thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:27,662 | INFO     | [job] queue monitor thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:27,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 09:02:44] 2025-04-18 13:02:27,714 | INFO     | [job] control thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:27,737 | INFO     | [data] copytool_in thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:27,767 | INFO     | all payload control threads have been joined
[2025-04-18 09:02:44] 2025-04-18 13:02:27,785 | INFO     | [payload] failed_post thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,158 | INFO     | [job] job monitor thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,180 | INFO     | [data] control thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,247 | INFO     | [job] validate thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,546 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,557 | INFO     | [payload] validate_post thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,753 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,772 | INFO     | [payload] control thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:28,871 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:29,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 09:02:44] 2025-04-18 13:02:29,701 | INFO     | [data] copytool_out thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:33,363 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:37,169 | INFO     | job.realtimelogging is not enabled
[2025-04-18 09:02:44] 2025-04-18 13:02:38,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 09:02:44] 2025-04-18 13:02:39,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746439104320)>', '<ExcThread(monitor, started 139746005210880)>']
[2025-04-18 09:02:44] 2025-04-18 13:02:40,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 09:02:44] 2025-04-18 13:02:40,058 | INFO     | [monitor] control thread has ended
[2025-04-18 09:02:44] 2025-04-18 13:02:44,309 | INFO     | all workflow threads have been joined
[2025-04-18 09:02:44] 2025-04-18 13:02:44,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 09:02:44] 2025-04-18 13:02:44,309 | INFO     | traces error code: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:44,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 09:02:44] 2025-04-18 13:02:44,391 [wrapper] ==== pilot stdout END ====
[2025-04-18 09:02:44] 2025-04-18 13:02:44,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 09:02:44] 2025-04-18 13:02:44,398 [wrapper] pilotpid: 22603
[2025-04-18 09:02:44] 2025-04-18 13:02:44,402 [wrapper] Pilot exit status: 0
[2025-04-18 09:02:44] 2025-04-18 13:02:44,417 [wrapper] pandaids: 6595666825
[2025-04-18 09:02:44] 2025-04-18 13:02:44,457 [wrapper] cleanup supervisor_pilot 10850 22604
[2025-04-18 09:02:44] 2025-04-18 13:02:44,461 [wrapper] Test setup, not cleaning
[2025-04-18 09:02:44] 2025-04-18 13:02:44,465 [wrapper] apfmon messages muted
[2025-04-18 09:02:44] 2025-04-18 13:02:44,469 [wrapper] ==== wrapper stdout END ====
[2025-04-18 09:02:44] 2025-04-18 13:02:44,473 [wrapper] ==== wrapper stderr END ====
[2025-04-18 09:02:44]  *** Error codes and diagnostics ***
[2025-04-18 09:02:44]     "exeErrorCode": 0,
[2025-04-18 09:02:44]     "exeErrorDiag": "",
[2025-04-18 09:02:44]     "pilotErrorCode": 0,
[2025-04-18 09:02:44]     "pilotErrorDiag": "",
[2025-04-18 09:02:44]  *** Listing of results directory ***
[2025-04-18 09:02:44] total 409912
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas    495897 Apr 10 00:45 pilot3.tar.gz
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas      5111 Apr 10 01:05 queuedata.json
[2025-04-18 09:02:44] -rwx------ 1 boincer umatlas     37140 Apr 10 01:05 runpilot2-wrapper.sh
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas       100 Apr 18 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 09:02:44] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 07:39 run_atlas
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas       105 Apr 18 07:39 job.xml
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas 223888700 Apr 18 07:39 EVNT.44075162._000876.pool.root.1
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 07:39 start_atlas.sh
[2025-04-18 09:02:44] drwxrwx--x 2 boincer umatlas      4096 Apr 18 07:39 shared
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas    508881 Apr 18 07:39 input.tar.gz
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas         0 Apr 18 07:39 boinc_lockfile
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas      2549 Apr 18 07:40 pandaJob.out
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas       424 Apr 18 07:40 setup.sh.local
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas    990572 Apr 18 07:40 agis_schedconf.cvmfs.json
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas   1618536 Apr 18 07:40 agis_ddmendpoints.agis.ALL.json
[2025-04-18 09:02:44] drwx------ 4 boincer umatlas      4096 Apr 18 07:40 pilot3
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas      5866 Apr 18 08:56 init_data.xml
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas 190322939 Apr 18 09:01 HITS.44075164._022011.pool.root.1
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas       529 Apr 18 09:01 boinc_task_state.xml
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas      1048 Apr 18 09:02 memory_monitor_summary.json
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas        95 Apr 18 09:02 pilot_heartbeat.json
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 09:02 boinc_mmap_file
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas        27 Apr 18 09:02 wrapper_checkpoint.txt
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas    368495 Apr 18 09:02 log.44075164._022011.job.log.tgz.1
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas      7752 Apr 18 09:02 heartbeat.json
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas      4425 Apr 18 09:02 pilotlog.txt
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas    469204 Apr 18 09:02 log.44075164._022011.job.log.1
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas       357 Apr 18 09:02 output.list
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas       620 Apr 18 09:02 runtime_log
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas    860160 Apr 18 09:02 result.tar.gz
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 09:02 runtime_log.err
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas       658 Apr 18 09:02 hufLDmvHzM7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIcNLDmNVyp1m.diag
[2025-04-18 09:02:44] -rw-r--r-- 1 boincer umatlas     21272 Apr 18 09:02 stderr.txt
[2025-04-18 09:02:44] HITS file was successfully produced:
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas 190322939 Apr 18 09:01 shared/HITS.pool.root.1
[2025-04-18 09:02:44]  *** Contents of shared directory: ***
[2025-04-18 09:02:44] total 405872
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas 223888700 Apr 18 07:39 ATLAS.root_0
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 07:39 start_atlas.sh
[2025-04-18 09:02:44] -rw-r--r-- 2 boincer umatlas    508881 Apr 18 07:39 input.tar.gz
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas 190322939 Apr 18 09:01 HITS.pool.root.1
[2025-04-18 09:02:44] -rw------- 1 boincer umatlas    860160 Apr 18 09:02 result.tar.gz
09:02:46 (18881): run_atlas exited; CPU time 45830.790890
09:02:46 (18881): called boinc_finish(0)

</stderr_txt>
]]>

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