Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:17 (35493): wrapper (7.7.26015): starting
07:27:17 (35493): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 07:27:17] Arguments: --nthreads 10
[2025-04-18 07:27:17] Threads: 10
[2025-04-18 07:27:17] Checking for CVMFS
[2025-04-18 07:27:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 07:27:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 07:27:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 07:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 07:27:17] 2.11.2.0 7995 40232 135752 145001 3 503 10944750 18432000 9117 130560 0 76872586 98.303 273806990 40314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 07:27:17] CVMFS is ok
[2025-04-18 07:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 07:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 07:27:17] Further information can be found at the LHC@home message board.
[2025-04-18 07:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 07:27:17] Checking for apptainer binary...
[2025-04-18 07:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 07:27:17] Running /usr/bin/apptainer --version
[2025-04-18 07:27:17] apptainer version 1.3.2-1.el7
[2025-04-18 07:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 07:27:18] c-210-11.aglt2.org
[2025-04-18 07:27:18] apptainer works
[2025-04-18 07:27:18] Set ATHENA_PROC_NUMBER=10
[2025-04-18 07:27:18] Set ATHENA_CORE_NUMBER=10
[2025-04-18 07:27:18] Starting ATLAS job with PandaID=6604828368
[2025-04-18 07:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 12:54:09]  *** The last 200 lines of the pilot log: ***
[2025-04-18 12:54:09] 2025-04-18 16:53:47,391 | INFO     | mean y: 2491996.544025157
[2025-04-18 12:54:09] 2025-04-18 16:53:47,392 | INFO     | -- intersect: -25355851063.316887
[2025-04-18 12:54:09] 2025-04-18 16:53:47,392 | INFO     | intersect: -25355851063.316887
[2025-04-18 12:54:09] 2025-04-18 16:53:47,392 | INFO     | chi2: 7.857344486591063
[2025-04-18 12:54:09] 2025-04-18 16:53:47,393 | INFO     | sum of square deviations: 9508609126.447304
[2025-04-18 12:54:09] 2025-04-18 16:53:47,400 | INFO     | sum of deviations: 208764803419.361
[2025-04-18 12:54:09] 2025-04-18 16:53:47,400 | INFO     | mean x: 1744985296.3897765
[2025-04-18 12:54:09] 2025-04-18 16:53:47,400 | INFO     | mean y: 2512890.3003194886
[2025-04-18 12:54:09] 2025-04-18 16:53:47,400 | INFO     | -- intersect: -38309243069.59548
[2025-04-18 12:54:09] 2025-04-18 16:53:47,400 | INFO     | intersect: -38309243069.59548
[2025-04-18 12:54:09] 2025-04-18 16:53:47,401 | INFO     | chi2: 5.4246028580927215
[2025-04-18 12:54:09] 2025-04-18 16:53:47,401 | INFO     | current chi2=5.4246028580927215 (change=30.961371652343004 %)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,406 | INFO     | sum of square deviations: 9060210020.675383
[2025-04-18 12:54:09] 2025-04-18 16:53:47,409 | INFO     | sum of deviations: 205233666192.07773
[2025-04-18 12:54:09] 2025-04-18 16:53:47,409 | INFO     | mean x: 1744985143.8961039
[2025-04-18 12:54:09] 2025-04-18 16:53:47,409 | INFO     | mean y: 2511689.314935065
[2025-04-18 12:54:09] 2025-04-18 16:53:47,409 | INFO     | -- intersect: -39525236311.58752
[2025-04-18 12:54:09] 2025-04-18 16:53:47,409 | INFO     | intersect: -39525236311.58752
[2025-04-18 12:54:09] 2025-04-18 16:53:47,414 | INFO     | chi2: 5.424457546098226
[2025-04-18 12:54:09] 2025-04-18 16:53:47,414 | INFO     | current chi2=5.424457546098226 (change=0.0026787582113789476 %)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,415 | INFO     | right removable region: 307
[2025-04-18 12:54:09] 2025-04-18 16:53:47,415 | INFO     | sum of square deviations: 9508553250.664524
[2025-04-18 12:54:09] 2025-04-18 16:53:47,418 | INFO     | sum of deviations: 58036825258.33549
[2025-04-18 12:54:09] 2025-04-18 16:53:47,418 | INFO     | mean x: 1744985601.3929713
[2025-04-18 12:54:09] 2025-04-18 16:53:47,418 | INFO     | mean y: 2520566.607028754
[2025-04-18 12:54:09] 2025-04-18 16:53:47,423 | INFO     | -- intersect: -10648250560.880493
[2025-04-18 12:54:09] 2025-04-18 16:53:47,423 | INFO     | intersect: -10648250560.880493
[2025-04-18 12:54:09] 2025-04-18 16:53:47,423 | INFO     | chi2: 5.0428299984760026
[2025-04-18 12:54:09] 2025-04-18 16:53:47,424 | INFO     | current chi2=5.0428299984760026 (change=35.820174270304236 %)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,424 | INFO     | sum of square deviations: 9060079419.879805
[2025-04-18 12:54:09] 2025-04-18 16:53:47,431 | INFO     | sum of deviations: -8975749809.298717
[2025-04-18 12:54:09] 2025-04-18 16:53:47,431 | INFO     | mean x: 1744985753.8993506
[2025-04-18 12:54:09] 2025-04-18 16:53:47,431 | INFO     | mean y: 2543355.5064935065
[2025-04-18 12:54:09] 2025-04-18 16:53:47,431 | INFO     | -- intersect: 1731287091.838869
[2025-04-18 12:54:09] 2025-04-18 16:53:47,432 | INFO     | intersect: 1731287091.838869
[2025-04-18 12:54:09] 2025-04-18 16:53:47,432 | INFO     | chi2: 3.4747969189154193
[2025-04-18 12:54:09] 2025-04-18 16:53:47,432 | INFO     | current chi2=3.4747969189154193 (change=31.094307760413493 %)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,433 | INFO     | sum of square deviations: 8625931439.069239
[2025-04-18 12:54:09] 2025-04-18 16:53:47,439 | INFO     | sum of deviations: -54004603824.207924
[2025-04-18 12:54:09] 2025-04-18 16:53:47,440 | INFO     | mean x: 1744985906.4059405
[2025-04-18 12:54:09] 2025-04-18 16:53:47,440 | INFO     | mean y: 2559121.115511551
[2025-04-18 12:54:09] 2025-04-18 16:53:47,440 | INFO     | -- intersect: 10927439897.173203
[2025-04-18 12:54:09] 2025-04-18 16:53:47,440 | INFO     | intersect: 10927439897.173203
[2025-04-18 12:54:09] 2025-04-18 16:53:47,441 | INFO     | chi2: 2.6578483635100287
[2025-04-18 12:54:09] 2025-04-18 16:53:47,441 | INFO     | current chi2=2.6578483635100287 (change=23.510684925448334 %)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,441 | INFO     | left removable region: 30
[2025-04-18 12:54:09] 2025-04-18 16:53:47,441 | INFO     | sum of square deviations: 6590463297.256337
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | sum of deviations: -3084253391.7761707
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | mean x: 1744986028.4151626
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | mean y: 2587019.1371841156
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | -- intersect: 819218389.9517452
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | intersect: 819218389.9517452
[2025-04-18 12:54:09] 2025-04-18 16:53:47,453 | INFO     | chi2: 0.02260454195933512
[2025-04-18 12:54:09] 2025-04-18 16:53:47,453 | INFO     | -- intersect: 819218389.9517452
[2025-04-18 12:54:09] 2025-04-18 16:53:47,453 | INFO     | current memory leak: -0.47 B/s (using 277 data points, chi2=0.02)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,454 | INFO     | ..............................
[2025-04-18 12:54:09] 2025-04-18 16:53:47,454 | INFO     | . Timing measurements:
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . get job = 0 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . initial setup = 4 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . payload setup = 18 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . stage-in = 0 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . payload execution = 19365 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . stage-out = 9 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | . log creation = 1 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,455 | INFO     | ..............................
[2025-04-18 12:54:09] 2025-04-18 16:53:47,448 | INFO     | monitor loop #1271: job 0:6604828368 is in state 'finished'
[2025-04-18 12:54:09] 2025-04-18 16:53:47,469 | WARNING  | exception caught: deque index out of range
[2025-04-18 12:54:09] 2025-04-18 16:53:47,735 | INFO     | 
[2025-04-18 12:54:09] 2025-04-18 16:53:47,735 | INFO     | job summary report
[2025-04-18 12:54:09] 2025-04-18 16:53:47,735 | INFO     | --------------------------------------------------
[2025-04-18 12:54:09] 2025-04-18 16:53:47,735 | INFO     | PanDA job id: 6604828368
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | task id: 44075483
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | errors: (none)
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | pilot state: finished 
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | transexitcode: 0
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | exeerrorcode: 0
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | exeerrordiag: 
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | exitcode: 0
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | exitmsg: OK
[2025-04-18 12:54:09] 2025-04-18 16:53:47,736 | INFO     | cpuconsumptiontime: 49974 s
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | nevents: 400
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | neventsw: 0
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | pid: 9253
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | pgrp: 9253
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | corecount: 10
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | event service: False
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | sizes: {0: 2425945, 1: 2426630, 2: 2426829, 13: 2426829, 24: 2426885, 30: 2427119, 35: 2427275, 19390: 2460128, 19392: 2460127, 19402: 2469124, 19406: 2469180, 194
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | --------------------------------------------------
[2025-04-18 12:54:09] 2025-04-18 16:53:47,737 | INFO     | 
[2025-04-18 12:54:09] 2025-04-18 16:53:47,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 12:54:09] 2025-04-18 16:53:48,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 12:54:09] 2025-04-18 16:53:48,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 12:54:09] 2025-04-18 16:53:48,438 | INFO     | job 6604828368 has completed (purged errors)
[2025-04-18 12:54:09] 2025-04-18 16:53:48,438 | INFO     | overall cleanup function is called
[2025-04-18 12:54:09] 2025-04-18 16:53:49,463 | INFO     | --- collectZombieJob: --- 10, [9253]
[2025-04-18 12:54:09] 2025-04-18 16:53:49,464 | INFO     | zombie collector waiting for pid 9253
[2025-04-18 12:54:09] 2025-04-18 16:53:49,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 12:54:09] 2025-04-18 16:53:49,464 | INFO     | collected zombie processes
[2025-04-18 12:54:09] 2025-04-18 16:53:49,464 | INFO     | will attempt to kill all subprocesses of pid=9253
[2025-04-18 12:54:09] 2025-04-18 16:53:50,764 | INFO     | process IDs to be killed: [9253] (in reverse order)
[2025-04-18 12:54:09] 2025-04-18 16:53:51,520 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 12:54:09] 2025-04-18 16:53:51,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 12:54:09] 2025-04-18 16:53:51,560 | INFO     | did not find any defunct processes belonging to 9253
[2025-04-18 12:54:09] 2025-04-18 16:53:51,602 | INFO     | did not find any defunct processes belonging to 9253
[2025-04-18 12:54:09] 2025-04-18 16:53:51,602 | INFO     | ready for new job
[2025-04-18 12:54:09] 2025-04-18 16:53:51,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 12:54:09] 2025-04-18 16:53:51,605 | INFO     | **************************************
[2025-04-18 12:54:09] 2025-04-18 16:53:51,605 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 12:54:09] 2025-04-18 16:53:51,605 | INFO     | **************************************
[2025-04-18 12:54:09] 2025-04-18 16:53:51,605 | INFO     | 
[2025-04-18 12:54:09] 2025-04-18 16:53:51,607 | INFO     | architecture information:
[2025-04-18 12:54:09] 2025-04-18 16:53:51,620 | INFO     | executing command: cat /etc/os-release
[2025-04-18 12:54:09] 2025-04-18 16:53:51,904 | INFO     | cat /etc/os-release:
[2025-04-18 12:54:09] NAME="CentOS Linux"
[2025-04-18 12:54:09] VERSION="7 (Core)"
[2025-04-18 12:54:09] ID="centos"
[2025-04-18 12:54:09] ID_LIKE="rhel fedora"
[2025-04-18 12:54:09] VERSION_ID="7"
[2025-04-18 12:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 12:54:09] ANSI_COLOR="0;31"
[2025-04-18 12:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 12:54:09] HOME_URL="https://www.centos.org/"
[2025-04-18 12:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 12:54:09] 
[2025-04-18 12:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 12:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 12:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 12:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 12:54:09] 
[2025-04-18 12:54:09] 2025-04-18 16:53:51,905 | INFO     | **************************************
[2025-04-18 12:54:09] 2025-04-18 16:53:52,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 12:54:09] 2025-04-18 16:53:52,774 | INFO     | sufficient remaining disk space (56589549568 B)
[2025-04-18 12:54:09] 2025-04-18 16:53:52,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 12:54:09] 2025-04-18 16:53:52,774 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 12:54:09] 2025-04-18 16:53:52,775 | INFO     | update_server=False
[2025-04-18 12:54:09] 2025-04-18 16:53:52,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 12:54:09] 2025-04-18 16:53:52,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 12:54:09] 2025-04-18 16:53:52,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:54:09] 2025-04-18 16:53:52,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 12:54:09] 2025-04-18 16:53:52,776 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 12:54:09] 2025-04-18 16:53:52,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 12:54:09] 2025-04-18 16:53:52,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 12:54:09] 2025-04-18 16:53:53,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:54:09] 2025-04-18 16:53:53,539 | INFO     | aborting loop
[2025-04-18 12:54:09] 2025-04-18 16:53:53,766 | INFO     | all data control threads have been joined
[2025-04-18 12:54:09] 2025-04-18 16:53:53,781 | INFO     | [job] retrieve thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:53,791 | INFO     | [job] queue monitor thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:53,952 | INFO     | [payload] validate_post thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,005 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,019 | INFO     | [job] validate thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,031 | INFO     | all payload control threads have been joined
[2025-04-18 12:54:09] 2025-04-18 16:53:54,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 12:54:09] 2025-04-18 16:53:54,289 | INFO     | all job control threads have been joined
[2025-04-18 12:54:09] 2025-04-18 16:53:54,544 | INFO     | [job] job monitor thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,773 | INFO     | [data] control thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:54,902 | INFO     | [payload] failed_post thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:55,034 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:55,038 | INFO     | [payload] control thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:55,055 | INFO     | [data] copytool_in thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:55,063 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:55,296 | INFO     | [job] control thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:56,145 | INFO     | [data] copytool_out thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:56,786 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 12:54:09] 2025-04-18 16:53:57,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658720978752)>', '<ExcThread(monitor, started 139658428143360)>']
[2025-04-18 12:54:09] 2025-04-18 16:53:57,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 12:54:09] 2025-04-18 16:53:57,828 | INFO     | [monitor] control thread has ended
[2025-04-18 12:54:09] 2025-04-18 16:54:02,750 | INFO     | all workflow threads have been joined
[2025-04-18 12:54:09] 2025-04-18 16:54:02,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 12:54:09] 2025-04-18 16:54:02,751 | INFO     | traces error code: 0
[2025-04-18 12:54:09] 2025-04-18 16:54:02,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 12:54:09] 2025-04-18 16:54:06,549 [wrapper] ==== pilot stdout END ====
[2025-04-18 12:54:09] 2025-04-18 16:54:06,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 12:54:09] 2025-04-18 16:54:06,597 [wrapper] pilotpid: 39291
[2025-04-18 12:54:09] 2025-04-18 16:54:06,658 [wrapper] Pilot exit status: 0
[2025-04-18 12:54:09] 2025-04-18 16:54:06,836 [wrapper] pandaids: 6604828368
[2025-04-18 12:54:09] 2025-04-18 16:54:07,493 [wrapper] cleanup supervisor_pilot 17606 39292
[2025-04-18 12:54:09] 2025-04-18 16:54:07,517 [wrapper] Test setup, not cleaning
[2025-04-18 12:54:09] 2025-04-18 16:54:07,557 [wrapper] apfmon messages muted
[2025-04-18 12:54:09] 2025-04-18 16:54:07,603 [wrapper] ==== wrapper stdout END ====
[2025-04-18 12:54:09] 2025-04-18 16:54:07,644 [wrapper] ==== wrapper stderr END ====
[2025-04-18 12:54:09]  *** Error codes and diagnostics ***
[2025-04-18 12:54:09]     "exeErrorCode": 0,
[2025-04-18 12:54:09]     "exeErrorDiag": "",
[2025-04-18 12:54:09]     "pilotErrorCode": 0,
[2025-04-18 12:54:09]     "pilotErrorDiag": "",
[2025-04-18 12:54:09]  *** Listing of results directory ***
[2025-04-18 12:54:09] total 414560
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 21:35 pilot3.tar.gz
[2025-04-18 12:54:09] -rwx------ 1 boincer umatlas     37140 Apr 16 21:38 runpilot2-wrapper.sh
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 21:38 queuedata.json
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas       100 Apr 18 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 12:54:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 07:27 run_atlas
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas       105 Apr 18 07:27 job.xml
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas 222577853 Apr 18 07:27 EVNT.44075481._001898.pool.root.1
[2025-04-18 12:54:09] drwxrwx--x 2 boincer umatlas      4096 Apr 18 07:27 shared
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 07:27 input.tar.gz
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 07:27 start_atlas.sh
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas         0 Apr 18 07:27 boinc_lockfile
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 07:27 pandaJob.out
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas       467 Apr 18 07:27 setup.sh.local
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas    990572 Apr 18 07:27 agis_schedconf.cvmfs.json
[2025-04-18 12:54:09] drwx------ 4 boincer umatlas      4096 Apr 18 07:27 pilot3
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas 193895610 Apr 18 12:48 HITS.44075483._048576.pool.root.1
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas       531 Apr 18 12:48 boinc_task_state.xml
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas      1056 Apr 18 12:52 memory_monitor_summary.json
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas   1618536 Apr 18 12:52 agis_ddmendpoints.agis.ALL.json
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas    458626 Apr 18 12:52 log.44075483._048576.job.log.tgz.1
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas        95 Apr 18 12:53 pilot_heartbeat.json
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas      7750 Apr 18 12:53 heartbeat.json
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas      4476 Apr 18 12:54 pilotlog.txt
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas      6229 Apr 18 12:54 init_data.xml
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 12:54 boinc_mmap_file
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas        28 Apr 18 12:54 wrapper_checkpoint.txt
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas   1629365 Apr 18 12:54 log.44075483._048576.job.log.1
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas       357 Apr 18 12:54 output.list
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas       620 Apr 18 12:54 runtime_log
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas   2109440 Apr 18 12:54 result.tar.gz
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas       662 Apr 18 12:54 SYjKDmmNTP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmigbLDmZB7FAn.diag
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas     11421 Apr 18 12:54 runtime_log.err
[2025-04-18 12:54:09] -rw-r--r-- 1 boincer umatlas     20904 Apr 18 12:54 stderr.txt
[2025-04-18 12:54:09] HITS file was successfully produced:
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas 193895610 Apr 18 12:48 shared/HITS.pool.root.1
[2025-04-18 12:54:09]  *** Contents of shared directory: ***
[2025-04-18 12:54:09] total 409300
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas 222577853 Apr 18 07:27 ATLAS.root_0
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas    508886 Apr 18 07:27 input.tar.gz
[2025-04-18 12:54:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 07:27 start_atlas.sh
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas 193895610 Apr 18 12:48 HITS.pool.root.1
[2025-04-18 12:54:09] -rw------- 1 boincer umatlas   2109440 Apr 18 12:54 result.tar.gz
12:54:11 (35493): run_atlas exited; CPU time 50337.704939
12:54:11 (35493): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN