Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 07:18:45 (22724): Detected: vboxwrapper 26206
2025-04-18 07:18:45 (22724): Detected: BOINC client v8.0.2
2025-04-18 07:18:45 (22724): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-18 07:18:45 (22724): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 07:18:46 (22724): Create VM. (boinc_01421fb06b7513a5, slot#1)
2025-04-18 07:18:46 (22724): Setting Memory Size for VM. (4800MB)
2025-04-18 07:18:47 (22724): Setting CPU Count for VM. (8)
2025-04-18 07:18:47 (22724): Setting Chipset Options for VM.
2025-04-18 07:18:47 (22724): Setting Graphics Controller Options for VM.
2025-04-18 07:18:47 (22724): Setting Boot Options for VM.
2025-04-18 07:18:48 (22724): Setting Network Configuration for NAT.
2025-04-18 07:18:48 (22724): Enabling VM Network Access.
2025-04-18 07:18:48 (22724): Disabling USB Support for VM.
2025-04-18 07:18:48 (22724): Disabling COM Port Support for VM.
2025-04-18 07:18:49 (22724): Disabling LPT Port Support for VM.
2025-04-18 07:18:49 (22724): Disabling Audio Support for VM.
2025-04-18 07:18:49 (22724): Disabling Clipboard Support for VM.
2025-04-18 07:18:49 (22724): Disabling Drag and Drop Support for VM.
2025-04-18 07:18:50 (22724): Adding storage controller(s) to VM.
2025-04-18 07:18:50 (22724): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 07:18:51 (22724): Adding VirtualBox Guest Additions to VM.
2025-04-18 07:18:51 (22724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 07:18:51 (22724): forwarding host port 57634 to guest port 80
2025-04-18 07:18:51 (22724): Enabling remote desktop for VM.
2025-04-18 07:18:52 (22724): Required extension pack not installed, remote desktop not enabled.
2025-04-18 07:18:52 (22724): Enabling shared directory for VM.
2025-04-18 07:18:52 (22724): Starting VM using VBoxManage interface. (boinc_01421fb06b7513a5, slot#1)
2025-04-18 07:18:58 (22724): Successfully started VM. (PID = '23472')
2025-04-18 07:18:58 (22724): Reporting VM Process ID to BOINC.
2025-04-18 07:18:58 (22724): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-18 07:18:58 (22724): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 07:18:58 (22724): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 07:18:58 (22724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 07:18:58 (22724): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 07:18:58 (22724): Detected: Web Application Enabled (http://localhost:57634)
2025-04-18 07:18:58 (22724): Preference change detected
2025-04-18 07:18:58 (22724): Setting CPU throttle for VM. (100%)
2025-04-18 07:18:58 (22724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 07:19:00 (22724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 07:19:00 (22724): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 07:19:03 (22724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 07:19:03 (22724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 07:19:03 (22724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 07:19:11 (22724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 07:19:11 (22724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 07:19:19 (22724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000272 main     Log opened 2025-04-18T07:19:17.600065000Z
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000526 main     OS Product: Linux
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000602 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000655 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000732 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000734 main     Process ID: 1378
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.000736 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 07:19:19 (22724): Guest Log: 00:00:00.002766 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 07:19:19 (22724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 07:19:19 (22724): Guest Log: [INFO] Mounting shared directory
2025-04-18 07:19:19 (22724): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 07:19:23 (22724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 07:19:23 (22724): Guest Log: [INFO] Detected branch: prod
2025-04-18 07:19:23 (22724): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 07:19:23 (22724): Guest Log: Copying input files
2025-04-18 07:19:24 (22724): Guest Log: Copied input files into RunAtlas.
2025-04-18 07:19:25 (22724): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 07:19:25 (22724): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 07:19:25 (22724): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 07:19:25 (22724): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 07:19:29 (22724): Guest Log: 00:00:10.007151 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 637 348 000ns (GuestNow=1 744 975 168 243 110 000 ns GuestLast=1 744 960 757 605 762 000 ns fSetTimeLastLoop=true )
2025-04-18 07:19:33 (22724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 07:19:34 (22724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 07:19:34 (22724): Guest Log: 2.6.3.0 1656 0 32216 145001 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 07:19:35 (22724): Guest Log: copied the webapp to /var/www
2025-04-18 07:19:35 (22724): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 07:19:35 (22724): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 07:19:35 (22724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 07:19:35 (22724): Guest Log:  *** Starting ATLAS job. (PandaID=6606242426 taskID=44075483) ***
2025-04-18 07:35:26 (22724): Guest Log:  *** Job finished ***
2025-04-18 07:35:26 (22724): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 07:35:26 (22724): Guest Log: 2025-04-18 11:35:13,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-18 07:35:26 (22724): Guest Log: 2025-04-18 11:35:14,436 | INFO     | [job] queue monitor thread has finished
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:16,889 | INFO     | [data] queue_monitor thread has finished
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:18,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713654261568)>', '<ExcThread(monitor, started 139712962471680)>']
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:19,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:19,444 | INFO     | [monitor] control thread has ended
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,653 | INFO     | all workflow threads have been joined
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,654 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,654 | INFO     | traces error code: 0
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,727 [wrapper] ==== pilot stdout END ====
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,732 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,738 [wrapper] pilotpid: 6016
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,745 [wrapper] Pilot exit status: 0
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,802 [wrapper] pandaids: 6606242426
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,851 [wrapper] cleanup supervisor_pilot 20182 6017
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,861 [wrapper] Test setup, not cleaning
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,867 [wrapper] apfmon messages muted
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,874 [wrapper] ==== wrapper stdout END ====
2025-04-18 07:35:27 (22724): Guest Log: 2025-04-18 11:35:23,878 [wrapper] ==== wrapper stderr END ====
2025-04-18 07:35:27 (22724): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 07:35:27 (22724): Guest Log:     "exeErrorCode": 65,
2025-04-18 07:35:27 (22724): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
2025-04-18 07:35:27 (22724): Guest Log:     "pilotErrorCode": 1305,
2025-04-18 07:35:27 (22724): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
2025-04-18 07:35:27 (22724): Guest Log:  *** Listing of results directory ***
2025-04-18 07:35:27 (22724): Guest Log: total 4064
2025-04-18 07:35:27 (22724): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 18 08:17 pilot3.tar.gz
2025-04-18 07:35:27 (22724): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 18 08:17 queuedata.json
2025-04-18 07:35:27 (22724): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 18 08:18 runpilot2-wrapper.sh
2025-04-18 07:35:27 (22724): Guest Log: -rwxr-xr-x. 1 atlas atlas    9325 Apr 18 11:19 init_data.xml
2025-04-18 07:35:27 (22724): Guest Log: -rwxr-xr-x. 1 atlas atlas  508890 Apr 18 11:19 input.tar.gz
2025-04-18 07:35:27 (22724): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 18 11:19 start_atlas.sh
2025-04-18 07:35:27 (22724): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 18 11:19 EVNT.44075481._002591.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 07:35:27 (22724): Guest Log: -rw-r--r--. 1 atlas atlas    2577 Apr 18 11:19 pandaJob.out
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas     424 Apr 18 11:19 setup.sh.local
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas  990572 Apr 18 11:20 agis_schedconf.cvmfs.json
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 18 11:20 agis_ddmendpoints.agis.ALL.json
2025-04-18 07:35:27 (22724): Guest Log: drwx------. 4 atlas atlas    4096 Apr 18 11:20 pilot3
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas    1017 Apr 18 11:33 memory_monitor_summary.json
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas   48681 Apr 18 11:33 log.44075483._066654.job.log.tgz.1
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas      95 Apr 18 11:34 pilot_heartbeat.json
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas   11741 Apr 18 11:35 heartbeat.json
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 18 11:35 pilotlog.txt
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas  131588 Apr 18 11:35 log.44075483._066654.job.log.1
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas     188 Apr 18 11:35 output.list
2025-04-18 07:35:27 (22724): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 18 11:35 runtime_log
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas  204800 Apr 18 11:35 result.tar.gz
2025-04-18 07:35:27 (22724): Guest Log: -rw-r--r--. 1 atlas atlas   10787 Apr 18 11:35 runtime_log.err
2025-04-18 07:35:27 (22724): Guest Log: -rw-------. 1 atlas atlas     644 Apr 18 11:35 D5bMDmB7vP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9qeLDm1UdYxm.diag
2025-04-18 07:35:27 (22724): Guest Log: Looking for outputfile HITS.44075483._066654.pool.root.1
2025-04-18 07:35:27 (22724): Guest Log: No HITS file was produced
2025-04-18 07:35:27 (22724): Guest Log: Successfully finished the ATLAS job!
2025-04-18 07:35:27 (22724): Guest Log: Copying the results back to the shared directory!
2025-04-18 07:35:27 (22724): Guest Log:  *** Contents of shared directory: ***
2025-04-18 07:35:27 (22724): Guest Log: total 217352
2025-04-18 07:35:27 (22724): Guest Log: -rwxrwxrwx. 1 root root 221815210 Apr 18 11:18 ATLAS.root_0
2025-04-18 07:35:27 (22724): Guest Log: -rwxrwxrwx. 1 root root      9325 Apr 18 11:18 init_data.xml
2025-04-18 07:35:27 (22724): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr 18 11:11 input.tar.gz
2025-04-18 07:35:27 (22724): Guest Log: -rwxrwxrwx. 1 root root    204800 Apr 18 11:35 result.tar.gz
2025-04-18 07:35:27 (22724): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 11:11 start_atlas.sh
2025-04-18 07:35:27 (22724): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 07:35:27 (22724): VM Completion File Detected.
2025-04-18 07:35:27 (22724): Powering off VM.
2025-04-18 07:35:27 (22724): Successfully stopped VM.
2025-04-18 07:35:27 (22724): Deregistering VM. (boinc_01421fb06b7513a5, slot#1)
2025-04-18 07:35:27 (22724): Removing network bandwidth throttle group from VM.
2025-04-18 07:35:27 (22724): Removing VM from VirtualBox.
07:35:33 (22724): called boinc_finish(0)

</stderr_txt>
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