Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:48 (11445): wrapper (7.7.26015): starting
06:40:48 (11445): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 06:40:48] Arguments: --nthreads 12
[2025-04-18 06:40:48] Threads: 12
[2025-04-18 06:40:48] Checking for CVMFS
[2025-04-18 06:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 06:40:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 06:40:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 06:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 06:40:48] 2.11.2.0 2994 217144 165696 144999 3 58 10607534 20275201 1 130560 0 23161469 99.950 8018894 49294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 06:40:48] CVMFS is ok
[2025-04-18 06:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 06:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 06:40:48] Further information can be found at the LHC@home message board.
[2025-04-18 06:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 06:40:48] Checking for apptainer binary...
[2025-04-18 06:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 06:40:48] Running /usr/bin/apptainer --version
[2025-04-18 06:40:48] apptainer version 1.3.2-1.el7
[2025-04-18 06:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 06:40:50] c-205-21.aglt2.org
[2025-04-18 06:40:50] apptainer works
[2025-04-18 06:40:50] Set ATHENA_PROC_NUMBER=12
[2025-04-18 06:40:50] Set ATHENA_CORE_NUMBER=12
[2025-04-18 06:40:50] Starting ATLAS job with PandaID=6606240317
[2025-04-18 06:40:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 08:07:07]  *** The last 200 lines of the pilot log: ***
[2025-04-18 08:07:07]  replicas=None
[2025-04-18 08:07:07]  scope=mc23_13p6TeV
[2025-04-18 08:07:07]  status=None
[2025-04-18 08:07:07]  status_code=0
[2025-04-18 08:07:07]  storage_token=
[2025-04-18 08:07:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606240317/log.44075483._066379.job.log.tgz.1
[2025-04-18 08:07:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/ed/log.44075483._066379.job.log.tgz.1
[2025-04-18 08:07:07]  workdir=None
[2025-04-18 08:07:07] ]
[2025-04-18 08:07:07] 2025-04-18 12:06:37,805 | INFO     | transferring file log.44075483._066379.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606240317/log.44075483._066379.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 08:07:07] 2025-04-18 12:06:37,805 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606240317/log.44075483._066379.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._066379.job
[2025-04-18 08:07:07] 2025-04-18 12:06:37,826 | INFO     | adding to output.list: log.44075483._066379.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/ed/log.44075483._066379.job.log.tg
[2025-04-18 08:07:07] 2025-04-18 12:06:37,827 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 08:07:07] 2025-04-18 12:06:37,827 | INFO     | summary of transferred files:
[2025-04-18 08:07:07] 2025-04-18 12:06:37,827 | INFO     |  -- lfn=log.44075483._066379.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 08:07:07] 2025-04-18 12:06:37,827 | INFO     | stage-out finished correctly
[2025-04-18 08:07:07] 2025-04-18 12:06:39,672 | WARNING  | process 21456 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 08:07:07] 2025-04-18 12:06:39,672 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606240317/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 08:07:07] 2025-04-18 12:06:39,765 | INFO     | number of running child processes to parent process 21456: 1
[2025-04-18 08:07:07] 2025-04-18 12:06:39,765 | INFO     | maximum number of monitored processes: 6
[2025-04-18 08:07:07] 2025-04-18 12:06:41,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 08:07:07] 2025-04-18 12:06:42,268 | INFO     | monitor loop #384: job 0:6606240317 is in state 'finished'
[2025-04-18 08:07:07] 2025-04-18 12:06:42,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 08:07:07] 2025-04-18 12:06:42,704 | INFO     | job 6606240317 has state=finished
[2025-04-18 08:07:07] 2025-04-18 12:06:42,704 | INFO     | preparing for final server update for job 6606240317 in state='finished'
[2025-04-18 08:07:07] 2025-04-18 12:06:42,705 | INFO     | this job has now completed (state=finished)
[2025-04-18 08:07:07] 2025-04-18 12:06:42,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 08:07:07] 2025-04-18 12:06:42,705 | INFO     | log transfer has been attempted: DONE
[2025-04-18 08:07:07] 2025-04-18 12:06:42,705 | INFO     | job 6606240317 has finished - writing final server update
[2025-04-18 08:07:07] 2025-04-18 12:06:42,706 | INFO     | total number of processed events: 400 (read)
[2025-04-18 08:07:07] 2025-04-18 12:06:42,707 | INFO     | executing command: lscpu
[2025-04-18 08:07:07] 2025-04-18 12:06:42,734 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 08:07:07] 2025-04-18 12:06:44,771 | INFO     | monitor loop #385: job 0:6606240317 is in state 'finished'
[2025-04-18 08:07:07] 2025-04-18 12:06:44,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,274 | INFO     | monitor loop #386: job 0:6606240317 is in state 'finished'
[2025-04-18 08:07:07] 2025-04-18 12:06:47,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,412 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 08:07:07] 2025-04-18 12:06:47,412 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606240317/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,413 | INFO     | extracted standard info from prmon json
[2025-04-18 08:07:07] 2025-04-18 12:06:47,413 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 08:07:07] 2025-04-18 12:06:47,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 08:07:07] 2025-04-18 12:06:47,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 08:07:07] 2025-04-18 12:06:47,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 08:07:07] 2025-04-18 12:06:47,415 | INFO     | fitting pss+swap vs Time
[2025-04-18 08:07:07] 2025-04-18 12:06:47,415 | INFO     | sum of square deviations: 141539398.0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | sum of deviations: 21705730405.999996
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | mean x: 1744975515.0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | mean y: 2561078.038961039
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | -- intersect: -267597616885.5624
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | intersect: -267597616885.5624
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | chi2: 2.0575356154172493
[2025-04-18 08:07:07] 2025-04-18 12:06:47,416 | INFO     | -- intersect: -267597616885.5624
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | current memory leak: 153.35 B/s (using 77 data points, chi2=2.06)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | ..............................
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | . Timing measurements:
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | . get job = 0 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | . initial setup = 3 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,417 | INFO     | . payload setup = 7 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,418 | INFO     | . stage-in = 0 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,418 | INFO     | . payload execution = 5106 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,418 | INFO     | . stage-out = 0 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,418 | INFO     | . log creation = 0 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,418 | INFO     | ..............................
[2025-04-18 08:07:07] 2025-04-18 12:06:47,503 | INFO     | 
[2025-04-18 08:07:07] 2025-04-18 12:06:47,503 | INFO     | job summary report
[2025-04-18 08:07:07] 2025-04-18 12:06:47,503 | INFO     | --------------------------------------------------
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | PanDA job id: 6606240317
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | task id: 44075483
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | errors: (none)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | pilot state: finished 
[2025-04-18 08:07:07] 2025-04-18 12:06:47,504 | INFO     | transexitcode: 0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | exeerrorcode: 0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | exeerrordiag: 
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | exitcode: 0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | exitmsg: OK
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | cpuconsumptiontime: 47506 s
[2025-04-18 08:07:07] 2025-04-18 12:06:47,505 | INFO     | nevents: 400
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | neventsw: 0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | pid: 21456
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | pgrp: 21456
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | corecount: 12
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | event service: False
[2025-04-18 08:07:07] 2025-04-18 12:06:47,506 | INFO     | sizes: {0: 2426822, 5: 2427028, 11: 2427084, 5117: 2453260, 5118: 2462201, 5122: 2462257, 5128: 2462555}
[2025-04-18 08:07:07] 2025-04-18 12:06:47,507 | INFO     | --------------------------------------------------
[2025-04-18 08:07:07] 2025-04-18 12:06:47,507 | INFO     | 
[2025-04-18 08:07:07] 2025-04-18 12:06:47,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 08:07:07] 2025-04-18 12:06:47,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 08:07:07] 2025-04-18 12:06:47,534 | INFO     | job 6606240317 has completed (purged errors)
[2025-04-18 08:07:07] 2025-04-18 12:06:47,534 | INFO     | overall cleanup function is called
[2025-04-18 08:07:07] 2025-04-18 12:06:48,539 | INFO     | --- collectZombieJob: --- 10, [21456]
[2025-04-18 08:07:07] 2025-04-18 12:06:48,539 | INFO     | zombie collector waiting for pid 21456
[2025-04-18 08:07:07] 2025-04-18 12:06:48,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 08:07:07] 2025-04-18 12:06:48,539 | INFO     | collected zombie processes
[2025-04-18 08:07:07] 2025-04-18 12:06:48,540 | INFO     | will attempt to kill all subprocesses of pid=21456
[2025-04-18 08:07:07] 2025-04-18 12:06:48,766 | INFO     | PID=15044 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 08:07:07] 2025-04-18 12:06:48,769 | INFO     | process IDs to be killed: [21456] (in reverse order)
[2025-04-18 08:07:07] 2025-04-18 12:06:48,817 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 08:07:07] 2025-04-18 12:06:48,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 08:07:07] 2025-04-18 12:06:48,821 | INFO     | did not find any defunct processes belonging to 21456
[2025-04-18 08:07:07] 2025-04-18 12:06:48,824 | INFO     | did not find any defunct processes belonging to 21456
[2025-04-18 08:07:07] 2025-04-18 12:06:48,824 | INFO     | ready for new job
[2025-04-18 08:07:07] 2025-04-18 12:06:48,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 08:07:07] 2025-04-18 12:06:48,825 | INFO     | **************************************
[2025-04-18 08:07:07] 2025-04-18 12:06:48,825 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 08:07:07] 2025-04-18 12:06:48,825 | INFO     | **************************************
[2025-04-18 08:07:07] 2025-04-18 12:06:48,825 | INFO     | 
[2025-04-18 08:07:07] 2025-04-18 12:06:48,826 | INFO     | architecture information:
[2025-04-18 08:07:07] 2025-04-18 12:06:48,826 | INFO     | executing command: cat /etc/os-release
[2025-04-18 08:07:07] 2025-04-18 12:06:48,840 | INFO     | cat /etc/os-release:
[2025-04-18 08:07:07] NAME="CentOS Linux"
[2025-04-18 08:07:07] VERSION="7 (Core)"
[2025-04-18 08:07:07] ID="centos"
[2025-04-18 08:07:07] ID_LIKE="rhel fedora"
[2025-04-18 08:07:07] VERSION_ID="7"
[2025-04-18 08:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 08:07:07] ANSI_COLOR="0;31"
[2025-04-18 08:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 08:07:07] HOME_URL="https://www.centos.org/"
[2025-04-18 08:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 08:07:07] 
[2025-04-18 08:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 08:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 08:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 08:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 08:07:07] 
[2025-04-18 08:07:07] 2025-04-18 12:06:48,840 | INFO     | **************************************
[2025-04-18 08:07:07] 2025-04-18 12:06:49,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 08:07:07] 2025-04-18 12:06:49,358 | INFO     | sufficient remaining disk space (29390536704 B)
[2025-04-18 08:07:07] 2025-04-18 12:06:49,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 08:07:07] 2025-04-18 12:06:49,359 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 08:07:07] 2025-04-18 12:06:49,359 | INFO     | update_server=False
[2025-04-18 08:07:07] 2025-04-18 12:06:49,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 08:07:07] 2025-04-18 12:06:49,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 08:07:07] 2025-04-18 12:06:49,360 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 08:07:07] 2025-04-18 12:06:49,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 08:07:07] 2025-04-18 12:06:49,360 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 08:07:07] 2025-04-18 12:06:49,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 08:07:07] 2025-04-18 12:06:49,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 08:07:07] 2025-04-18 12:06:49,512 | INFO     | all payload control threads have been joined
[2025-04-18 08:07:07] 2025-04-18 12:06:49,777 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 08:07:07] 2025-04-18 12:06:49,777 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 08:07:07] 2025-04-18 12:06:49,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 08:07:07] 2025-04-18 12:06:49,778 | INFO     | will abort loop
[2025-04-18 08:07:07] 2025-04-18 12:06:49,859 | INFO     | all data control threads have been joined
[2025-04-18 08:07:07] 2025-04-18 12:06:50,365 | INFO     | [job] retrieve thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,366 | INFO     | [job] queue monitor thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,518 | INFO     | [payload] control thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,778 | INFO     | [job] validate thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,783 | INFO     | [job] job monitor thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,819 | INFO     | all job control threads have been joined
[2025-04-18 08:07:07] 2025-04-18 12:06:50,864 | INFO     | [data] control thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,880 | INFO     | [payload] validate_post thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,924 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:50,996 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:51,136 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:51,365 | INFO     | [data] copytool_out thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:51,645 | INFO     | [data] copytool_in thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:51,824 | INFO     | [job] control thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:51,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 08:07:07] 2025-04-18 12:06:51,899 | INFO     | [payload] failed_post thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:06:55,890 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:07:00,174 | INFO     | job.realtimelogging is not enabled
[2025-04-18 08:07:07] 2025-04-18 12:07:01,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 08:07:07] 2025-04-18 12:07:02,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352740878144)>', '<ExcThread(monitor, started 140351964681984)>']
[2025-04-18 08:07:07] 2025-04-18 12:07:02,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 08:07:07] 2025-04-18 12:07:02,424 | INFO     | [monitor] control thread has ended
[2025-04-18 08:07:07] 2025-04-18 12:07:07,294 | INFO     | all workflow threads have been joined
[2025-04-18 08:07:07] 2025-04-18 12:07:07,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 08:07:07] 2025-04-18 12:07:07,295 | INFO     | traces error code: 0
[2025-04-18 08:07:07] 2025-04-18 12:07:07,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 08:07:07] 2025-04-18 12:07:07,387 [wrapper] ==== pilot stdout END ====
[2025-04-18 08:07:07] 2025-04-18 12:07:07,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 08:07:07] 2025-04-18 12:07:07,395 [wrapper] pilotpid: 15044
[2025-04-18 08:07:07] 2025-04-18 12:07:07,399 [wrapper] Pilot exit status: 0
[2025-04-18 08:07:07] 2025-04-18 12:07:07,415 [wrapper] pandaids: 6606240317
[2025-04-18 08:07:07] 2025-04-18 12:07:07,452 [wrapper] cleanup supervisor_pilot 14069 15045
[2025-04-18 08:07:07] 2025-04-18 12:07:07,456 [wrapper] Test setup, not cleaning
[2025-04-18 08:07:07] 2025-04-18 12:07:07,460 [wrapper] apfmon messages muted
[2025-04-18 08:07:07] 2025-04-18 12:07:07,464 [wrapper] ==== wrapper stdout END ====
[2025-04-18 08:07:07] 2025-04-18 12:07:07,468 [wrapper] ==== wrapper stderr END ====
[2025-04-18 08:07:07]  *** Error codes and diagnostics ***
[2025-04-18 08:07:07]     "exeErrorCode": 0,
[2025-04-18 08:07:07]     "exeErrorDiag": "",
[2025-04-18 08:07:07]     "pilotErrorCode": 0,
[2025-04-18 08:07:07]     "pilotErrorDiag": "",
[2025-04-18 08:07:07]  *** Listing of results directory ***
[2025-04-18 08:07:07] total 417932
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 03:46 pilot3.tar.gz
[2025-04-18 08:07:07] -rwx------ 1 boincer umatlas     37140 Apr 18 03:55 runpilot2-wrapper.sh
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 03:55 queuedata.json
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas       100 Apr 18 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 08:07:07] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 06:40 run_atlas
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas       105 Apr 18 06:40 job.xml
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas 222985889 Apr 18 06:40 EVNT.44075481._002580.pool.root.1
[2025-04-18 08:07:07] drwxrwx--x 2 boincer umatlas      4096 Apr 18 06:40 shared
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 06:40 input.tar.gz
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 06:40 start_atlas.sh
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas         0 Apr 18 06:40 boinc_lockfile
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 06:40 pandaJob.out
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas       424 Apr 18 06:40 setup.sh.local
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas    990559 Apr 18 06:41 agis_schedconf.cvmfs.json
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas   1618536 Apr 18 06:41 agis_ddmendpoints.agis.ALL.json
[2025-04-18 08:07:07] drwx------ 4 boincer umatlas      4096 Apr 18 06:41 pilot3
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 08:04 init_data.xml
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas        95 Apr 18 08:06 pilot_heartbeat.json
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas 199435704 Apr 18 08:06 HITS.44075483._066379.pool.root.1
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas      1049 Apr 18 08:06 memory_monitor_summary.json
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas       530 Apr 18 08:06 boinc_task_state.xml
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas    353409 Apr 18 08:06 log.44075483._066379.job.log.tgz.1
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas      7754 Apr 18 08:06 heartbeat.json
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas        27 Apr 18 08:07 wrapper_checkpoint.txt
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas      4734 Apr 18 08:07 pilotlog.txt
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 08:07 boinc_mmap_file
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas    487012 Apr 18 08:07 log.44075483._066379.job.log.1
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas       357 Apr 18 08:07 output.list
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas       620 Apr 18 08:07 runtime_log
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas    860160 Apr 18 08:07 result.tar.gz
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 08:07 runtime_log.err
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas       658 Apr 18 08:07 3jQODmOkvP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8meLDmt2BmWo.diag
[2025-04-18 08:07:07] -rw-r--r-- 1 boincer umatlas     21869 Apr 18 08:07 stderr.txt
[2025-04-18 08:07:07] HITS file was successfully produced:
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas 199435704 Apr 18 08:06 shared/HITS.pool.root.1
[2025-04-18 08:07:07]  *** Contents of shared directory: ***
[2025-04-18 08:07:07] total 413888
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas 222985889 Apr 18 06:40 ATLAS.root_0
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 06:40 input.tar.gz
[2025-04-18 08:07:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 06:40 start_atlas.sh
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas 199435704 Apr 18 08:06 HITS.pool.root.1
[2025-04-18 08:07:07] -rw------- 1 boincer umatlas    860160 Apr 18 08:07 result.tar.gz
08:07:09 (11445): run_atlas exited; CPU time 47489.746806
08:07:09 (11445): called boinc_finish(0)

</stderr_txt>
]]>

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